RNA–Protein interactions for RNA: ENST00000372056.8

LDB3-203, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-203ENST00000372056 NFE4Q86UQ8 179 aa9.17□□□□□ -0.94
LDB3-203ENST00000372056 PRADC1Q9BSG0 188 aa9.17□□□□□ -0.94
LDB3-203ENST00000372056 VCX2Q9H322 139 aa9.17□□□□□ -0.94
LDB3-203ENST00000372056 SPANXA1Q9NS26 97 aa9.17□□□□□ -0.94
LDB3-203ENST00000372056 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.17□□□□□ -0.94
LDB3-203ENST00000372056 TRGV4A0A0C4DH28 118 aa9.17□□□□□ -0.94
LDB3-203ENST00000372056 IGKV2-29A2NJV5 120 aaPredicted RBP9.17□□□□□ -0.94
LDB3-203ENST00000372056 K7EIL1 84 aa9.17□□□□□ -0.94
LDB3-203ENST00000372056 UBE2D3P61077 147 aa9.17□□□□□ -0.94
LDB3-203ENST00000372056 UBE2D2P62837 147 aa9.17□□□□□ -0.94
LDB3-203ENST00000372056 CEMP1Q6PRD7 247 aaPredicted RBP9.17□□□□□ -0.94
LDB3-203ENST00000372056 DAZ4Q86SG3 579 aaKnown RBP9.17□□□□□ -0.94
LDB3-203ENST00000372056 DAZ3Q9NR90 486 aaKnown RBP9.17□□□□□ -0.94
LDB3-203ENST00000372056 HIGD1BQ9P298 99 aa9.17□□□□□ -0.94
LDB3-203ENST00000372056 UBE2D4Q9Y2X8 147 aa9.17□□□□□ -0.94
LDB3-203ENST00000372056 TRBV25-1A0A075B6N4 114 aa9.16□□□□□ -0.94
LDB3-203ENST00000372056 DAD1P61803 113 aa9.16□□□□□ -0.94
LDB3-203ENST00000372056 FAM222AQ5U5X8 452 aa9.16□□□□□ -0.94
LDB3-203ENST00000372056 MAPKAPK5-AS1Q8N8E1 139 aa9.16□□□□□ -0.94
LDB3-203ENST00000372056 AMELXQ99217 191 aa9.16□□□□□ -0.94
LDB3-203ENST00000372056 GAGE12JA6NER3 117 aa9.15□□□□□ -0.94
LDB3-203ENST00000372056 GAGE4Q13068 117 aa9.15□□□□□ -0.94
LDB3-203ENST00000372056 GAGE5Q13069 117 aa9.15□□□□□ -0.94
LDB3-203ENST00000372056 FHL2Q14192 279 aa9.15□□□□□ -0.94
LDB3-203ENST00000372056 GAGE13Q4V321 117 aa9.15□□□□□ -0.94
LDB3-203ENST00000372056 TM2D3Q9BRN9 247 aa9.15□□□□□ -0.94
LDB3-203ENST00000372056 CHAC1Q9BUX1 264 aa9.15□□□□□ -0.94
LDB3-203ENST00000372056 PKD1L1Q8TDX9 2849 aa9.15□□□□□ -0.94
LDB3-203ENST00000372056 ATP5G1P05496 136 aa9.15□□□□□ -0.95
LDB3-203ENST00000372056 DEFB130BP0DP73 79 aa9.14□□□□□ -0.95
LDB3-203ENST00000372056 DEFB130AP0DP74 79 aa9.14□□□□□ -0.95
LDB3-203ENST00000372056 HERVK_113P61574 105 aa9.14□□□□□ -0.95
LDB3-203ENST00000372056 SMAGPQ0VAQ4 97 aa9.14□□□□□ -0.95
LDB3-203ENST00000372056 TMEM170BQ5T4T1 132 aa9.14□□□□□ -0.95
LDB3-203ENST00000372056 NTM-AS1Q6ZSK4 140 aa9.14□□□□□ -0.95
LDB3-203ENST00000372056 TIMM21Q9BVV7 248 aa9.14□□□□□ -0.95
LDB3-203ENST00000372056 PRO0255Q9UI72 69 aa9.14□□□□□ -0.95
LDB3-203ENST00000372056 MYMXA0A1B0GTQ4 84 aa9.13□□□□□ -0.95
LDB3-203ENST00000372056 SH2D6Q7Z4S9 175 aa9.13□□□□□ -0.95
LDB3-203ENST00000372056 OR5A1Q8NGJ0 315 aa9.13□□□□□ -0.95
LDB3-203ENST00000372056 A0A0J9YXV3 536 aa9.13□□□□□ -0.95
LDB3-203ENST00000372056 LOC100131303A0A0U1RQF7 123 aa9.13□□□□□ -0.95
LDB3-203ENST00000372056 NHLRC4P0CG21 123 aaPredicted RBP9.13□□□□□ -0.95
LDB3-203ENST00000372056 MRPS36P82909 103 aaKnown RBP9.13□□□□□ -0.95
LDB3-203ENST00000372056 Q6ZUT4 128 aa9.13□□□□□ -0.95
LDB3-203ENST00000372056 H3BUT2 72 aa9.12□□□□□ -0.95
LDB3-203ENST00000372056 RNASE13Q5GAN3 156 aaKnown RBP9.12□□□□□ -0.95
LDB3-203ENST00000372056 SBSPONQ8IVN8 264 aa9.12□□□□□ -0.95
LDB3-203ENST00000372056 GTSF1LQ9H1H1 148 aa9.12□□□□□ -0.95
LDB3-203ENST00000372056 A0A1W2PPM0 123 aa9.11□□□□□ -0.95
LDB3-203ENST00000372056 LINC00694P0DN24 101 aa9.11□□□□□ -0.95
LDB3-203ENST00000372056 ZNF22P17026 224 aaPredicted RBP9.11□□□□□ -0.95
LDB3-203ENST00000372056 MRAPQ8TCY5 172 aa9.11□□□□□ -0.95
LDB3-203ENST00000372056 B9D2Q9BPU9 175 aa9.11□□□□□ -0.95
LDB3-203ENST00000372056 TMEM223A0PJW6 202 aa9.11□□□□□ -0.95
LDB3-203ENST00000372056 H3BNG1 76 aa9.11□□□□□ -0.95
LDB3-203ENST00000372056 ANK2Q01484 3957 aa9.1□□□□□ -0.95
LDB3-203ENST00000372056 ZNF815PA8K554 130 aa9.1□□□□□ -0.95
LDB3-203ENST00000372056 CSDC2Q9Y534 153 aaKnown RBP9.1□□□□□ -0.95
LDB3-203ENST00000372056 TMEM238C9JI98 176 aa9.09□□□□□ -0.95
LDB3-203ENST00000372056 TSPEAR-AS2P59090 65 aa9.09□□□□□ -0.95
LDB3-203ENST00000372056 DGAT2L7PQ6IED9 249 aa9.09□□□□□ -0.95
LDB3-203ENST00000372056 TINCRA0A1B0GVN0 87 aa9.08□□□□□ -0.96
LDB3-203ENST00000372056 TMEM243Q9BU79 118 aa9.08□□□□□ -0.96
LDB3-203ENST00000372056 DEFB4AO15263 64 aa9.08□□□□□ -0.96
LDB3-203ENST00000372056 UBE2D1P51668 147 aa9.08□□□□□ -0.96
LDB3-203ENST00000372056 TAL2Q16559 108 aa9.08□□□□□ -0.96
LDB3-203ENST00000372056 TM2D2Q9BX73 214 aa9.08□□□□□ -0.96
LDB3-203ENST00000372056 SPCS1Q9Y6A9 102 aa9.08□□□□□ -0.96
LDB3-203ENST00000372056 TRAV26-1A0A087WT03 109 aa9.07□□□□□ -0.96
LDB3-203ENST00000372056 H7C423 109 aa9.07□□□□□ -0.96
LDB3-203ENST00000372056 J3QQQ9 107 aa9.07□□□□□ -0.96
LDB3-203ENST00000372056 LEPROTO15243 131 aa9.07□□□□□ -0.96
LDB3-203ENST00000372056 PAX4O43316 350 aa9.07□□□□□ -0.96
LDB3-203ENST00000372056 SMIM13P0DJ93 91 aa9.07□□□□□ -0.96
LDB3-203ENST00000372056 FABP2P12104 132 aa9.07□□□□□ -0.96
LDB3-203ENST00000372056 GCSHP23434 173 aa9.07□□□□□ -0.96
LDB3-203ENST00000372056 C11orf45Q8TAV5 145 aa9.07□□□□□ -0.96
LDB3-203ENST00000372056 FXYD2P54710 66 aa9.06□□□□□ -0.96
LDB3-203ENST00000372056 CEND1Q8N111 149 aa9.06□□□□□ -0.96
LDB3-203ENST00000372056 PRB2P02812 416 aaPredicted RBP9.06□□□□□ -0.96
LDB3-203ENST00000372056 MRPL23Q16540 153 aaKnown RBP9.06□□□□□ -0.96
LDB3-203ENST00000372056 SCGB1D4Q6XE38 83 aa9.06□□□□□ -0.96
LDB3-203ENST00000372056 PLEKHB2Q96CS7 222 aa9.06□□□□□ -0.96
LDB3-203ENST00000372056 NAA38Q9BRA0 125 aaKnown RBP9.06□□□□□ -0.96
LDB3-203ENST00000372056 TRBV6-8A0A0A6YYG3 113 aa9.05□□□□□ -0.96
LDB3-203ENST00000372056 UBE2L6O14933 153 aa9.05□□□□□ -0.96
LDB3-203ENST00000372056 GYPEP15421 78 aa9.05□□□□□ -0.96
LDB3-203ENST00000372056 LGALS3P17931 250 aaKnown RBP9.05□□□□□ -0.96
LDB3-203ENST00000372056 C12orf74Q32Q52 190 aa9.05□□□□□ -0.96
LDB3-203ENST00000372056 RAB37Q96AX2 223 aa9.05□□□□□ -0.96
LDB3-203ENST00000372056 HIST1H4GQ99525 98 aa9.05□□□□□ -0.96
LDB3-203ENST00000372056 RETNQ9HD89 108 aa9.05□□□□□ -0.96
LDB3-203ENST00000372056 IGHV3-64A0A075B6Q5 118 aa9.04□□□□□ -0.96
LDB3-203ENST00000372056 IGLV5-45A0A087WSX0 123 aa9.04□□□□□ -0.96
LDB3-203ENST00000372056 A0A0J9YWU9 116 aa9.04□□□□□ -0.96
LDB3-203ENST00000372056 F5H768 121 aa9.04□□□□□ -0.96
LDB3-203ENST00000372056 CDC42SE2Q9NRR3 84 aa9.04□□□□□ -0.96
LDB3-203ENST00000372056 CELA1Q9UNI1 258 aa9.04□□□□□ -0.96
LDB3-203ENST00000372056 TIRAPP58753 221 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms