RNA–Protein interactions for RNA: ENST00000371248.3

VPS37B-202, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-202ENST00000371248 SPCS1Q9Y6A9 102 aa12.26□□□□□ -0.45
VPS37B-202ENST00000371248 MRPL23Q16540 153 aaKnown RBP12.26□□□□□ -0.45
VPS37B-202ENST00000371248 NRACQ8N912 160 aa12.26□□□□□ -0.45
VPS37B-202ENST00000371248 DNAJC30Q96LL9 226 aa12.26□□□□□ -0.45
VPS37B-202ENST00000371248 STARD9Q9P2P6 4700 aa12.25□□□□□ -0.45
VPS37B-202ENST00000371248 C15orf53Q8NAA6 179 aa12.25□□□□□ -0.45
VPS37B-202ENST00000371248 PRELID3AQ96N28 172 aa12.25□□□□□ -0.45
VPS37B-202ENST00000371248 RPL24P83731 157 aaKnown RBP12.25□□□□□ -0.45
VPS37B-202ENST00000371248 TNFRSF6BO95407 300 aa12.24□□□□□ -0.45
VPS37B-202ENST00000371248 PPP1R17O96001 155 aa12.24□□□□□ -0.45
VPS37B-202ENST00000371248 NPYP01303 97 aa12.24□□□□□ -0.45
VPS37B-202ENST00000371248 TENM2Q9NT68 2774 aa12.24□□□□□ -0.45
VPS37B-202ENST00000371248 APLNQ9ULZ1 77 aa12.23□□□□□ -0.45
VPS37B-202ENST00000371248 H0Y8G0 127 aa12.23□□□□□ -0.45
VPS37B-202ENST00000371248 LINC00694P0DN24 101 aa12.23□□□□□ -0.45
VPS37B-202ENST00000371248 UBE2D3P61077 147 aa12.23□□□□□ -0.45
VPS37B-202ENST00000371248 UBE2D2P62837 147 aa12.23□□□□□ -0.45
VPS37B-202ENST00000371248 TRBV6-5A0A0K0K1A5 114 aa12.22□□□□□ -0.45
VPS37B-202ENST00000371248 C3orf84H3BNL1 204 aa12.22□□□□□ -0.45
VPS37B-202ENST00000371248 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.22□□□□□ -0.45
VPS37B-202ENST00000371248 ATP6V0E2Q8NHE4 81 aa12.22□□□□□ -0.45
VPS37B-202ENST00000371248 CHCHD1Q96BP2 118 aaKnown RBP12.22□□□□□ -0.45
VPS37B-202ENST00000371248 IGHV3-38A0A0C4DH36 116 aa12.22□□□□□ -0.45
VPS37B-202ENST00000371248 SDHAF1A6NFY7 115 aa12.22□□□□□ -0.45
VPS37B-202ENST00000371248 FABP2P12104 132 aa12.22□□□□□ -0.45
VPS37B-202ENST00000371248 CASC10Q5T4H9 136 aa12.22□□□□□ -0.45
VPS37B-202ENST00000371248 SUMO2P61956 95 aaKnown RBP12.21□□□□□ -0.45
VPS37B-202ENST00000371248 RNASEKQ6P5S7 137 aaKnown RBP12.21□□□□□ -0.45
VPS37B-202ENST00000371248 URB1-AS1Q96HZ7 61 aa12.21□□□□□ -0.45
VPS37B-202ENST00000371248 PLECQ15149 4684 aaKnown RBP12.2□□□□□ -0.46
VPS37B-202ENST00000371248 SIVA1O15304 175 aa12.2□□□□□ -0.46
VPS37B-202ENST00000371248 SH2D6Q7Z4S9 175 aa12.2□□□□□ -0.46
VPS37B-202ENST00000371248 SPANXB1Q9NS25 103 aaPredicted RBP12.2□□□□□ -0.46
VPS37B-202ENST00000371248 TCTAP57738 103 aa12.2□□□□□ -0.46
VPS37B-202ENST00000371248 DEFB104AQ8WTQ1 72 aa12.2□□□□□ -0.46
VPS37B-202ENST00000371248 C20orf78Q9BR46 151 aa12.2□□□□□ -0.46
VPS37B-202ENST00000371248 F8W1H4 67 aa12.19□□□□□ -0.46
VPS37B-202ENST00000371248 LEPROTL1O95214 131 aa12.19□□□□□ -0.46
VPS37B-202ENST00000371248 FGF6P10767 208 aa12.19□□□□□ -0.46
VPS37B-202ENST00000371248 POLR2KP53803 58 aaKnown RBP12.19□□□□□ -0.46
VPS37B-202ENST00000371248 DAZ4Q86SG3 579 aaKnown RBP12.19□□□□□ -0.46
VPS37B-202ENST00000371248 DAZ3Q9NR90 486 aaKnown RBP12.19□□□□□ -0.46
VPS37B-202ENST00000371248 LOC389332A0A1B0GUA5 103 aa12.18□□□□□ -0.46
VPS37B-202ENST00000371248 LINC01545Q5VT33 79 aa12.18□□□□□ -0.46
VPS37B-202ENST00000371248 ERG28Q9UKR5 140 aa12.18□□□□□ -0.46
VPS37B-202ENST00000371248 LYPD5Q6UWN5 251 aa12.18□□□□□ -0.46
VPS37B-202ENST00000371248 ESRGQ1W209 222 aa12.17□□□□□ -0.46
VPS37B-202ENST00000371248 MAP1LC3CQ9BXW4 147 aa12.17□□□□□ -0.46
VPS37B-202ENST00000371248 MAP1LC3AQ9H492 121 aa12.17□□□□□ -0.46
VPS37B-202ENST00000371248 IGHV1-24A0A0C4DH33 117 aa12.17□□□□□ -0.46
VPS37B-202ENST00000371248 I3L3M4 83 aa12.17□□□□□ -0.46
VPS37B-202ENST00000371248 VCYO14598 125 aa12.17□□□□□ -0.46
VPS37B-202ENST00000371248 TRBV27A0A0K0K1C4 114 aa12.16□□□□□ -0.46
VPS37B-202ENST00000371248 SMIM2Q9BVW6 85 aa12.16□□□□□ -0.46
VPS37B-202ENST00000371248 HERV-K104P63124 156 aa12.15□□□□□ -0.46
VPS37B-202ENST00000371248 SS18L2Q9UHA2 77 aa12.15□□□□□ -0.46
VPS37B-202ENST00000371248 RPL32P62910 135 aaKnown RBP12.15□□□□□ -0.46
VPS37B-202ENST00000371248 GAGE6Q13070 117 aa12.15□□□□□ -0.46
VPS37B-202ENST00000371248 BOD1L2Q8IYS8 172 aa12.15□□□□□ -0.46
VPS37B-202ENST00000371248 IFI27P40305 119 aaPredicted RBP12.14□□□□□ -0.47
VPS37B-202ENST00000371248 CCL18P55774 89 aa12.14□□□□□ -0.47
VPS37B-202ENST00000371248 NTM-AS1Q6ZSK4 140 aa12.14□□□□□ -0.47
VPS37B-202ENST00000371248 LINC00173Q6ZV60 143 aa12.14□□□□□ -0.47
VPS37B-202ENST00000371248 KIR2DL4Q99706 377 aa12.14□□□□□ -0.47
VPS37B-202ENST00000371248 HSPB8Q9UJY1 196 aa12.14□□□□□ -0.47
VPS37B-202ENST00000371248 NAA38Q9BRA0 125 aaKnown RBP12.13□□□□□ -0.47
VPS37B-202ENST00000371248 CYSLTR1Q9Y271 337 aa12.13□□□□□ -0.47
VPS37B-202ENST00000371248 LYSTQ99698 3801 aa12.13□□□□□ -0.47
VPS37B-202ENST00000371248 IGLV2-18A0A075B6J9 118 aa12.12□□□□□ -0.47
VPS37B-202ENST00000371248 Q8N8P6 123 aa12.12□□□□□ -0.47
VPS37B-202ENST00000371248 PRSS3P2Q8NHM4 247 aa12.12□□□□□ -0.47
VPS37B-202ENST00000371248 LINC00588Q9Y4M8 146 aa12.12□□□□□ -0.47
VPS37B-202ENST00000371248 TRBV6-8A0A0A6YYG3 113 aa12.12□□□□□ -0.47
VPS37B-202ENST00000371248 TSHBP01222 138 aa12.12□□□□□ -0.47
VPS37B-202ENST00000371248 TIRAPP58753 221 aa12.12□□□□□ -0.47
VPS37B-202ENST00000371248 FCER1GP30273 86 aa12.11□□□□□ -0.47
VPS37B-202ENST00000371248 LELP1Q5T871 98 aa12.11□□□□□ -0.47
VPS37B-202ENST00000371248 NXT2Q9NPJ8 142 aaKnown RBP12.11□□□□□ -0.47
VPS37B-202ENST00000371248 SMIM13P0DJ93 91 aa12.1□□□□□ -0.47
VPS37B-202ENST00000371248 TRBV25-1A0A075B6N4 114 aa12.1□□□□□ -0.47
VPS37B-202ENST00000371248 ODF1Q14990 250 aa12.1□□□□□ -0.47
VPS37B-202ENST00000371248 UBE2DNLQ8IWF7 75 aa12.1□□□□□ -0.47
VPS37B-202ENST00000371248 RAB37Q96AX2 223 aa12.1□□□□□ -0.47
VPS37B-202ENST00000371248 WFDC2Q14508 124 aa12.08□□□□□ -0.48
VPS37B-202ENST00000371248 CHCHD7Q9BUK0 85 aa12.07□□□□□ -0.48
VPS37B-202ENST00000371248 SPINK8P0C7L1 97 aa12.07□□□□□ -0.48
VPS37B-202ENST00000371248 CHCHD5Q9BSY4 110 aa12.07□□□□□ -0.48
VPS37B-202ENST00000371248 LAGE3Q14657 143 aa12.06□□□□□ -0.48
VPS37B-202ENST00000371248 WFDC10BQ8IUB3 73 aa12.06□□□□□ -0.48
VPS37B-202ENST00000371248 TMEM243Q9BU79 118 aa12.06□□□□□ -0.48
VPS37B-202ENST00000371248 CDIP1Q9H305 208 aa12.06□□□□□ -0.48
VPS37B-202ENST00000371248 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.05□□□□□ -0.48
VPS37B-202ENST00000371248 IGKV2-29A2NJV5 120 aaPredicted RBP12.05□□□□□ -0.48
VPS37B-202ENST00000371248 E9PLD3 99 aa12.05□□□□□ -0.48
VPS37B-202ENST00000371248 K7EMI3 77 aa12.05□□□□□ -0.48
VPS37B-202ENST00000371248 UPK3BQ9BT76 320 aa12.05□□□□□ -0.48
VPS37B-202ENST00000371248 ORMDL2Q53FV1 153 aa12.04□□□□□ -0.48
VPS37B-202ENST00000371248 LGALS9CQ6DKI2 356 aa12.04□□□□□ -0.48
VPS37B-202ENST00000371248 LINC01546A6NGU7 62 aa12.04□□□□□ -0.48
VPS37B-202ENST00000371248 TMEM262E9PQX1 116 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms