RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 OBSCN-AS1Q96MR7 158 aa8.37□□□□□ -1.07
SMARCA1-201ENST00000371121 IGHV3-38A0A0C4DH36 116 aa8.37□□□□□ -1.07
SMARCA1-201ENST00000371121 RS1O15537 224 aa8.37□□□□□ -1.07
SMARCA1-201ENST00000371121 SS18Q15532 418 aa8.37□□□□□ -1.07
SMARCA1-201ENST00000371121 PIK3CD-AS1Q5SR53 167 aa8.37□□□□□ -1.07
SMARCA1-201ENST00000371121 LINC00242Q5T6M2 205 aa8.37□□□□□ -1.07
SMARCA1-201ENST00000371121 Q9H8V8 135 aa8.37□□□□□ -1.07
SMARCA1-201ENST00000371121 IGKV2-28A0A075B6P5 120 aa8.37□□□□□ -1.07
SMARCA1-201ENST00000371121 J3KT08 172 aa8.37□□□□□ -1.07
SMARCA1-201ENST00000371121 IGKV2D-28P01615 120 aa8.37□□□□□ -1.07
SMARCA1-201ENST00000371121 TRACP01848 142 aa8.37□□□□□ -1.07
SMARCA1-201ENST00000371121 RPS28P62857 69 aaKnown RBP8.37□□□□□ -1.07
SMARCA1-201ENST00000371121 SMIM1B2RUZ4 78 aa8.36□□□□□ -1.07
SMARCA1-201ENST00000371121 ADORA2A-AS1P86434 159 aa8.36□□□□□ -1.07
SMARCA1-201ENST00000371121 A0A087WYN8 130 aa8.36□□□□□ -1.07
SMARCA1-201ENST00000371121 F5H768 121 aa8.36□□□□□ -1.07
SMARCA1-201ENST00000371121 Q96MF0 132 aa8.36□□□□□ -1.07
SMARCA1-201ENST00000371121 FBN2P35556 2912 aa8.35□□□□□ -1.07
SMARCA1-201ENST00000371121 RBMY1BA6NDE4 496 aaKnown RBP8.35□□□□□ -1.07
SMARCA1-201ENST00000371121 RBMY1EA6NEQ0 496 aaKnown RBP8.35□□□□□ -1.07
SMARCA1-201ENST00000371121 ATP5G1P05496 136 aa8.35□□□□□ -1.07
SMARCA1-201ENST00000371121 RBMY1DP0C7P1 496 aaKnown RBP8.35□□□□□ -1.07
SMARCA1-201ENST00000371121 HOXD3P31249 432 aaPredicted RBP8.35□□□□□ -1.07
SMARCA1-201ENST00000371121 PIMREGQ9BSJ6 248 aa8.35□□□□□ -1.07
SMARCA1-201ENST00000371121 LINC00846Q9NV44 126 aa8.35□□□□□ -1.07
SMARCA1-201ENST00000371121 CCL21O00585 134 aa8.35□□□□□ -1.07
SMARCA1-201ENST00000371121 WIPF1O43516 503 aa8.35□□□□□ -1.07
SMARCA1-201ENST00000371121 FAM222AQ5U5X8 452 aa8.35□□□□□ -1.07
SMARCA1-201ENST00000371121 LINC00337Q8N6G1 96 aa8.35□□□□□ -1.07
SMARCA1-201ENST00000371121 PTPRQQ9UMZ3 2332 aa8.35□□□□□ -1.07
SMARCA1-201ENST00000371121 K7EQG2 157 aa8.35□□□□□ -1.07
SMARCA1-201ENST00000371121 C4orf26Q17RF5 130 aa8.34□□□□□ -1.07
SMARCA1-201ENST00000371121 BPESC1Q9GZL8 116 aa8.34□□□□□ -1.07
SMARCA1-201ENST00000371121 GAGE2AQ6NT46 116 aa8.34□□□□□ -1.07
SMARCA1-201ENST00000371121 TRAV13-1A0A0B4J241 112 aa8.33□□□□□ -1.08
SMARCA1-201ENST00000371121 USMG5Q96IX5 58 aa8.33□□□□□ -1.08
SMARCA1-201ENST00000371121 DSCR8Q96T75 97 aa8.33□□□□□ -1.08
SMARCA1-201ENST00000371121 UBTD1Q9HAC8 227 aa8.33□□□□□ -1.08
SMARCA1-201ENST00000371121 FAM19A3Q7Z5A8 133 aa8.33□□□□□ -1.08
SMARCA1-201ENST00000371121 IGHV4-38-2P0DP08 117 aa8.33□□□□□ -1.08
SMARCA1-201ENST00000371121 DEFB123Q8N688 67 aa8.33□□□□□ -1.08
SMARCA1-201ENST00000371121 K7EMT4 169 aa8.32□□□□□ -1.08
SMARCA1-201ENST00000371121 MALP21145 153 aa8.32□□□□□ -1.08
SMARCA1-201ENST00000371121 LY6EQ16553 131 aa8.32□□□□□ -1.08
SMARCA1-201ENST00000371121 AKAP6Q13023 2319 aa8.32□□□□□ -1.08
SMARCA1-201ENST00000371121 RPL18AQ02543 176 aaKnown RBP8.32□□□□□ -1.08
SMARCA1-201ENST00000371121 ATRXP46100 2492 aa8.32□□□□□ -1.08
SMARCA1-201ENST00000371121 PF4V1P10720 104 aa8.32□□□□□ -1.08
SMARCA1-201ENST00000371121 ZFHX2Q9C0A1 2572 aaPredicted RBP8.32□□□□□ -1.08
SMARCA1-201ENST00000371121 NBASA2RRP1 2371 aa8.32□□□□□ -1.08
SMARCA1-201ENST00000371121 C11orf72Q8NBR9 251 aa8.31□□□□□ -1.08
SMARCA1-201ENST00000371121 C14orf132Q9NPU4 83 aa8.31□□□□□ -1.08
SMARCA1-201ENST00000371121 IGKV3D-7A0A0C4DH55 119 aa8.31□□□□□ -1.08
SMARCA1-201ENST00000371121 RPL28P46779 137 aaKnown RBP8.31□□□□□ -1.08
SMARCA1-201ENST00000371121 FHL2Q14192 279 aa8.31□□□□□ -1.08
SMARCA1-201ENST00000371121 PRORYQ9H606 182 aa8.31□□□□□ -1.08
SMARCA1-201ENST00000371121 TTC28Q96AY4 2481 aa8.3□□□□□ -1.08
SMARCA1-201ENST00000371121 A6NDX4 124 aa8.3□□□□□ -1.08
SMARCA1-201ENST00000371121 H3BUA1 57 aa8.3□□□□□ -1.08
SMARCA1-201ENST00000371121 NTM-AS1Q6ZSK4 140 aa8.3□□□□□ -1.08
SMARCA1-201ENST00000371121 HTN1P15515 57 aa8.3□□□□□ -1.08
SMARCA1-201ENST00000371121 PSMB8P28062 276 aa8.3□□□□□ -1.08
SMARCA1-201ENST00000371121 PRIMA1Q86XR5 153 aa8.3□□□□□ -1.08
SMARCA1-201ENST00000371121 ATOX1O00244 68 aa8.29□□□□□ -1.08
SMARCA1-201ENST00000371121 SYNJ2BPP57105 145 aa8.29□□□□□ -1.08
SMARCA1-201ENST00000371121 CHD6Q8TD26 2715 aa8.29□□□□□ -1.08
SMARCA1-201ENST00000371121 HIST2H2BCQ6DN03 193 aa8.28□□□□□ -1.08
SMARCA1-201ENST00000371121 HIST2H2BDQ6DRA6 164 aa8.28□□□□□ -1.08
SMARCA1-201ENST00000371121 SETXQ7Z333 2677 aaKnown RBP8.28□□□□□ -1.08
SMARCA1-201ENST00000371121 HILS1P60008 231 aa8.28□□□□□ -1.08
SMARCA1-201ENST00000371121 TRAV25A0A0B4J276 109 aa8.28□□□□□ -1.08
SMARCA1-201ENST00000371121 H3BUX3 64 aa8.28□□□□□ -1.08
SMARCA1-201ENST00000371121 A8MTW9 85 aa8.27□□□□□ -1.08
SMARCA1-201ENST00000371121 SMIM11BQ8TCY0 68 aa8.27□□□□□ -1.08
SMARCA1-201ENST00000371121 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.27□□□□□ -1.093e-6■■■□□ 15
SMARCA1-201ENST00000371121 IGHV3-53P01767 116 aa8.27□□□□□ -1.09
SMARCA1-201ENST00000371121 SPTA1P02549 2419 aa8.27□□□□□ -1.09
SMARCA1-201ENST00000371121 SERP2Q8N6R1 65 aa8.27□□□□□ -1.09
SMARCA1-201ENST00000371121 ANK3Q12955 4377 aaKnown RBP8.26□□□□□ -1.09
SMARCA1-201ENST00000371121 Q6JHZ5 121 aa8.26□□□□□ -1.09
SMARCA1-201ENST00000371121 NCR3O14931 201 aa8.26□□□□□ -1.09
SMARCA1-201ENST00000371121 TMEM258P61165 79 aa8.26□□□□□ -1.09
SMARCA1-201ENST00000371121 KLRB1Q12918 225 aa8.25□□□□□ -1.09
SMARCA1-201ENST00000371121 K7ENP7 123 aa8.25□□□□□ -1.09
SMARCA1-201ENST00000371121 WFDC9Q8NEX5 89 aa8.25□□□□□ -1.09
SMARCA1-201ENST00000371121 USP17L23D6RBM5 183 aa8.25□□□□□ -1.09
SMARCA1-201ENST00000371121 AVPP01185 164 aa8.25□□□□□ -1.09
SMARCA1-201ENST00000371121 SLPIP03973 132 aa8.25□□□□□ -1.09
SMARCA1-201ENST00000371121 INAFM2P0DMQ5 153 aa8.24□□□□□ -1.09
SMARCA1-201ENST00000371121 CIRBPQ14011 172 aaKnown RBP8.24□□□□□ -1.09
SMARCA1-201ENST00000371121 HRCT1Q6UXD1 115 aa8.24□□□□□ -1.09
SMARCA1-201ENST00000371121 C10orf105Q8TEF2 133 aa8.24□□□□□ -1.09
SMARCA1-201ENST00000371121 EPM2AB3EWF7 344 aa8.24□□□□□ -1.09
SMARCA1-201ENST00000371121 HIVEP3Q5T1R4 2406 aa8.24□□□□□ -1.09
SMARCA1-201ENST00000371121 SNRPD3P62318 126 aaKnown RBP8.23□□□□□ -1.09
SMARCA1-201ENST00000371121 ZNF415Q09FC8 603 aa8.23□□□□□ -1.09
SMARCA1-201ENST00000371121 CDC42SE2Q9NRR3 84 aa8.23□□□□□ -1.09
SMARCA1-201ENST00000371121 RIF1Q5UIP0 2472 aaKnown RBP8.23□□□□□ -1.09
SMARCA1-201ENST00000371121 NF1P21359 2839 aa8.22□□□□□ -1.09
SMARCA1-201ENST00000371121 A0A096LNT2 108 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms