RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 GCSHP23434 173 aa12.23□□□□□ -0.45
UBE3D-203ENST00000369747 FXYD2P54710 66 aa12.23□□□□□ -0.45
UBE3D-203ENST00000369747 SPATA25Q9BR10 227 aa12.23□□□□□ -0.45
UBE3D-203ENST00000369747 GAGE12BA1L429 117 aa12.22□□□□□ -0.45
UBE3D-203ENST00000369747 K7EP13 123 aa12.22□□□□□ -0.45
UBE3D-203ENST00000369747 GAGE7O76087 117 aa12.22□□□□□ -0.45
UBE3D-203ENST00000369747 GAGE12FP0CL80 117 aa12.22□□□□□ -0.45
UBE3D-203ENST00000369747 GAGE12GP0CL81 117 aa12.22□□□□□ -0.45
UBE3D-203ENST00000369747 GAGE12IP0CL82 117 aa12.22□□□□□ -0.45
UBE3D-203ENST00000369747 CRYBA4P53673 196 aa12.22□□□□□ -0.45
UBE3D-203ENST00000369747 SLC25A29Q8N8R3 303 aa12.22□□□□□ -0.45
UBE3D-203ENST00000369747 CEND1Q8N111 149 aa12.21□□□□□ -0.45
UBE3D-203ENST00000369747 B9D2Q9BPU9 175 aa12.21□□□□□ -0.45
UBE3D-203ENST00000369747 TM2D2Q9BX73 214 aa12.21□□□□□ -0.45
UBE3D-203ENST00000369747 SPANXA1Q9NS26 97 aa12.21□□□□□ -0.45
UBE3D-203ENST00000369747 A0A0J9YXV3 536 aa12.21□□□□□ -0.46
UBE3D-203ENST00000369747 ZNF815PA8K554 130 aa12.21□□□□□ -0.46
UBE3D-203ENST00000369747 H3BRM9 83 aa12.21□□□□□ -0.46
UBE3D-203ENST00000369747 TAL2Q16559 108 aa12.21□□□□□ -0.46
UBE3D-203ENST00000369747 STAB2Q8WWQ8 2551 aa12.21□□□□□ -0.46
UBE3D-203ENST00000369747 TRGV2A0A075B6R0 118 aa12.2□□□□□ -0.46
UBE3D-203ENST00000369747 ZNF22P17026 224 aaPredicted RBP12.2□□□□□ -0.46
UBE3D-203ENST00000369747 TSPEAR-AS2P59090 65 aa12.2□□□□□ -0.46
UBE3D-203ENST00000369747 RPL36AP83881 106 aaKnown RBP12.2□□□□□ -0.46
UBE3D-203ENST00000369747 RPL36ALQ969Q0 106 aaKnown RBP12.2□□□□□ -0.46
UBE3D-203ENST00000369747 TMEM223A0PJW6 202 aa12.19□□□□□ -0.46
UBE3D-203ENST00000369747 RNASE13Q5GAN3 156 aaKnown RBP12.19□□□□□ -0.46
UBE3D-203ENST00000369747 CCL25O15444 150 aa12.19□□□□□ -0.46
UBE3D-203ENST00000369747 UBE2D3P61077 147 aa12.19□□□□□ -0.46
UBE3D-203ENST00000369747 UBE2D2P62837 147 aa12.19□□□□□ -0.46
UBE3D-203ENST00000369747 UBE2V1Q13404 147 aa12.19□□□□□ -0.46
UBE3D-203ENST00000369747 VAMP3Q15836 100 aa12.19□□□□□ -0.46
UBE3D-203ENST00000369747 FAM222AQ5U5X8 452 aa12.19□□□□□ -0.46
UBE3D-203ENST00000369747 PLEKHB2Q96CS7 222 aa12.19□□□□□ -0.46
UBE3D-203ENST00000369747 CELA1Q9UNI1 258 aa12.18□□□□□ -0.46
UBE3D-203ENST00000369747 MRPS36P82909 103 aaKnown RBP12.17□□□□□ -0.46
UBE3D-203ENST00000369747 Q6ZUT4 128 aa12.17□□□□□ -0.46
UBE3D-203ENST00000369747 HIST1H4GQ99525 98 aa12.17□□□□□ -0.46
UBE3D-203ENST00000369747 GAGE12JA6NER3 117 aa12.17□□□□□ -0.46
UBE3D-203ENST00000369747 C9orf118A6NHY6 69 aa12.17□□□□□ -0.46
UBE3D-203ENST00000369747 CIDEAO60543 219 aa12.17□□□□□ -0.46
UBE3D-203ENST00000369747 DEFB130BP0DP73 79 aa12.17□□□□□ -0.46
UBE3D-203ENST00000369747 DEFB130AP0DP74 79 aa12.17□□□□□ -0.46
UBE3D-203ENST00000369747 GAGE4Q13068 117 aa12.17□□□□□ -0.46
UBE3D-203ENST00000369747 GAGE5Q13069 117 aa12.17□□□□□ -0.46
UBE3D-203ENST00000369747 GAGE13Q4V321 117 aa12.17□□□□□ -0.46
UBE3D-203ENST00000369747 NTM-AS1Q6ZSK4 140 aa12.17□□□□□ -0.46
UBE3D-203ENST00000369747 DAZ4Q86SG3 579 aaKnown RBP12.17□□□□□ -0.46
UBE3D-203ENST00000369747 DAZ3Q9NR90 486 aaKnown RBP12.17□□□□□ -0.46
UBE3D-203ENST00000369747 A0A0J9YWU9 116 aa12.16□□□□□ -0.46
UBE3D-203ENST00000369747 PTTG1IPP53801 180 aa12.16□□□□□ -0.46
UBE3D-203ENST00000369747 J3QQQ9 107 aa12.15□□□□□ -0.46
UBE3D-203ENST00000369747 AMMECR1LQ6DCA0 310 aa12.15□□□□□ -0.46
UBE3D-203ENST00000369747 RAB37Q96AX2 223 aa12.15□□□□□ -0.46
UBE3D-203ENST00000369747 TIMM21Q9BVV7 248 aa12.15□□□□□ -0.46
UBE3D-203ENST00000369747 TRBV6-4A0A1B0GX49 114 aa12.15□□□□□ -0.46
UBE3D-203ENST00000369747 LEPROTO15243 131 aa12.15□□□□□ -0.46
UBE3D-203ENST00000369747 SMIM13P0DJ93 91 aa12.15□□□□□ -0.46
UBE3D-203ENST00000369747 SCGB1D4Q6XE38 83 aa12.15□□□□□ -0.46
UBE3D-203ENST00000369747 LOC100131303A0A0U1RQF7 123 aa12.14□□□□□ -0.47
UBE3D-203ENST00000369747 FHL2Q14192 279 aa12.14□□□□□ -0.47
UBE3D-203ENST00000369747 LINC00612Q8N6U2 182 aa12.14□□□□□ -0.47
UBE3D-203ENST00000369747 C11orf68Q9H3H3 251 aaKnown RBP12.14□□□□□ -0.47
UBE3D-203ENST00000369747 LYRM9A8MSI8 78 aa12.13□□□□□ -0.47
UBE3D-203ENST00000369747 K7ERJ3 54 aa12.13□□□□□ -0.47
UBE3D-203ENST00000369747 LINC00694P0DN24 101 aa12.13□□□□□ -0.47
UBE3D-203ENST00000369747 NHP2Q9NX24 153 aaKnown RBP12.13□□□□□ -0.47
UBE3D-203ENST00000369747 TRGV4A0A0C4DH28 118 aa12.13□□□□□ -0.47
UBE3D-203ENST00000369747 A0A0J9YY99 117 aa12.13□□□□□ -0.47
UBE3D-203ENST00000369747 TINCRA0A1B0GVN0 87 aa12.13□□□□□ -0.47
UBE3D-203ENST00000369747 H3BUT2 72 aa12.13□□□□□ -0.47
UBE3D-203ENST00000369747 LGALS3P17931 250 aaKnown RBP12.13□□□□□ -0.47
UBE3D-203ENST00000369747 NAA38Q9BRA0 125 aaKnown RBP12.13□□□□□ -0.47
UBE3D-203ENST00000369747 TGP01266 2768 aa12.13□□□□□ -0.47
UBE3D-203ENST00000369747 IGHV3-64A0A075B6Q5 118 aa12.12□□□□□ -0.47
UBE3D-203ENST00000369747 SPART-AS1P0CW21 52 aa12.12□□□□□ -0.47
UBE3D-203ENST00000369747 UBE2D1P51668 147 aa12.11□□□□□ -0.47
UBE3D-203ENST00000369747 DGAT2L7PQ6IED9 249 aa12.11□□□□□ -0.47
UBE3D-203ENST00000369747 OR5A1Q8NGJ0 315 aa12.11□□□□□ -0.47
UBE3D-203ENST00000369747 GTSF1LQ9H1H1 148 aa12.11□□□□□ -0.47
UBE3D-203ENST00000369747 DAD1P61803 113 aa12.09□□□□□ -0.47
UBE3D-203ENST00000369747 CSDC2Q9Y534 153 aaKnown RBP12.09□□□□□ -0.47
UBE3D-203ENST00000369747 NHLRC4P0CG21 123 aaPredicted RBP12.09□□□□□ -0.47
UBE3D-203ENST00000369747 IGHV3-30-3P0DP02 117 aa12.09□□□□□ -0.47
UBE3D-203ENST00000369747 C12orf74Q32Q52 190 aa12.09□□□□□ -0.47
UBE3D-203ENST00000369747 TRAV8-3A0A0A6YYJ7 113 aa12.08□□□□□ -0.48
UBE3D-203ENST00000369747 SRSF9Q13242 221 aaKnown RBP eCLIP12.08□□□□□ -0.48
UBE3D-203ENST00000369747 SPANXB1Q9NS25 103 aaPredicted RBP12.08□□□□□ -0.48
UBE3D-203ENST00000369747 A0A1B0GWB2 263 aa12.07□□□□□ -0.48
UBE3D-203ENST00000369747 A0A1W2PPM0 123 aa12.07□□□□□ -0.48
UBE3D-203ENST00000369747 IGHV1-58A0A0C4DH39 117 aa12.07□□□□□ -0.48
UBE3D-203ENST00000369747 NANOS2P60321 138 aaKnown RBP12.07□□□□□ -0.48
UBE3D-203ENST00000369747 TMEM243Q9BU79 118 aa12.07□□□□□ -0.48
UBE3D-203ENST00000369747 TIRAPP58753 221 aa12.06□□□□□ -0.48
UBE3D-203ENST00000369747 C11orf45Q8TAV5 145 aa12.06□□□□□ -0.48
UBE3D-203ENST00000369747 GEMIN7Q9H840 131 aaKnown RBP12.06□□□□□ -0.48
UBE3D-203ENST00000369747 IGLV5-45A0A087WSX0 123 aa12.05□□□□□ -0.48
UBE3D-203ENST00000369747 TEX48A0A1B0GUV7 120 aa12.05□□□□□ -0.48
UBE3D-203ENST00000369747 Q6ZTC4 211 aa12.05□□□□□ -0.48
UBE3D-203ENST00000369747 C10orf126Q8N4M7 172 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms