RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 TIMM17AQ99595 171 aa9.86□□□□□ -0.83
HMGCS2-201ENST00000369406 IGLV4-3A0A075B6K6 122 aa9.85□□□□□ -0.83
HMGCS2-201ENST00000369406 SPART-AS1P0CW21 52 aa9.85□□□□□ -0.83
HMGCS2-201ENST00000369406 GYPEP15421 78 aa9.85□□□□□ -0.83
HMGCS2-201ENST00000369406 UBE2D4Q9Y2X8 147 aa9.85□□□□□ -0.83
HMGCS2-201ENST00000369406 IGLV4-69A0A075B6H9 119 aa9.84□□□□□ -0.83
HMGCS2-201ENST00000369406 A0A096LPF7 62 aa9.84□□□□□ -0.83
HMGCS2-201ENST00000369406 TRAV12-1A0A0B4J245 112 aa9.84□□□□□ -0.83
HMGCS2-201ENST00000369406 HTN3P15516 51 aa9.84□□□□□ -0.83
HMGCS2-201ENST00000369406 DAZ4Q86SG3 579 aaKnown RBP9.84□□□□□ -0.83
HMGCS2-201ENST00000369406 DAZ3Q9NR90 486 aaKnown RBP9.84□□□□□ -0.83
HMGCS2-201ENST00000369406 A0A0J9YWU9 116 aa9.84□□□□□ -0.83
HMGCS2-201ENST00000369406 DEFB121Q5J5C9 76 aa9.84□□□□□ -0.83
HMGCS2-201ENST00000369406 TMEM141Q96I45 108 aa9.83□□□□□ -0.84
HMGCS2-201ENST00000369406 PRADC1Q9BSG0 188 aa9.83□□□□□ -0.84
HMGCS2-201ENST00000369406 PRO0255Q9UI72 69 aa9.83□□□□□ -0.84
HMGCS2-201ENST00000369406 Q6ZUT4 128 aa9.83□□□□□ -0.84
HMGCS2-201ENST00000369406 TRAV26-1A0A087WT03 109 aa9.82□□□□□ -0.84
HMGCS2-201ENST00000369406 IGKCP01834 107 aa9.82□□□□□ -0.84
HMGCS2-201ENST00000369406 IGKV2D-26A0A0A0MRZ7 120 aa9.82□□□□□ -0.84
HMGCS2-201ENST00000369406 F5H768 121 aa9.82□□□□□ -0.84
HMGCS2-201ENST00000369406 F8VRH5 84 aa9.82□□□□□ -0.84
HMGCS2-201ENST00000369406 TAX1BP3O14907 124 aa9.82□□□□□ -0.84
HMGCS2-201ENST00000369406 DPM2O94777 84 aa9.82□□□□□ -0.84
HMGCS2-201ENST00000369406 ATP5G1P05496 136 aa9.82□□□□□ -0.84
HMGCS2-201ENST00000369406 TM2D3Q9BRN9 247 aa9.82□□□□□ -0.84
HMGCS2-201ENST00000369406 PAX4O43316 350 aa9.81□□□□□ -0.84
HMGCS2-201ENST00000369406 PMVKQ15126 192 aa9.81□□□□□ -0.84
HMGCS2-201ENST00000369406 Q6ZTC4 211 aa9.81□□□□□ -0.84
HMGCS2-201ENST00000369406 C11orf68Q9H3H3 251 aaKnown RBP9.81□□□□□ -0.84
HMGCS2-201ENST00000369406 PYGO1Q9Y3Y4 419 aa9.81□□□□□ -0.84
HMGCS2-201ENST00000369406 C11orf86A6NJI1 115 aa9.81□□□□□ -0.84
HMGCS2-201ENST00000369406 K7ERU9 68 aa9.8□□□□□ -0.84
HMGCS2-201ENST00000369406 AMMECR1LQ6DCA0 310 aa9.8□□□□□ -0.84
HMGCS2-201ENST00000369406 TTTY13Q9BZ97 58 aa9.8□□□□□ -0.84
HMGCS2-201ENST00000369406 NANOS2P60321 138 aaKnown RBP9.8□□□□□ -0.84
HMGCS2-201ENST00000369406 AMELXQ99217 191 aa9.8□□□□□ -0.84
HMGCS2-201ENST00000369406 GTSF1LQ9H1H1 148 aa9.8□□□□□ -0.84
HMGCS2-201ENST00000369406 MPV17L2Q567V2 206 aa9.79□□□□□ -0.84
HMGCS2-201ENST00000369406 FGF6P10767 208 aa9.78□□□□□ -0.84
HMGCS2-201ENST00000369406 ATP6V0E2Q8NHE4 81 aa9.78□□□□□ -0.84
HMGCS2-201ENST00000369406 CSMD3Q7Z407 3707 aa9.78□□□□□ -0.84
HMGCS2-201ENST00000369406 TRBV6-8A0A0A6YYG3 113 aa9.78□□□□□ -0.84
HMGCS2-201ENST00000369406 TMEM238LA0A1B0GVL6 79 aa9.78□□□□□ -0.84
HMGCS2-201ENST00000369406 PCP2Q8IVA1 136 aa9.78□□□□□ -0.84
HMGCS2-201ENST00000369406 A0A0J9YXV3 536 aa9.77□□□□□ -0.84
HMGCS2-201ENST00000369406 LINC01549A6NIU2 74 aa9.77□□□□□ -0.84
HMGCS2-201ENST00000369406 SPANXA1Q9NS26 97 aa9.77□□□□□ -0.84
HMGCS2-201ENST00000369406 GAGE6Q13070 117 aa9.77□□□□□ -0.85
HMGCS2-201ENST00000369406 LYSTQ99698 3801 aa9.77□□□□□ -0.85
HMGCS2-201ENST00000369406 SPATA25Q9BR10 227 aa9.77□□□□□ -0.85
HMGCS2-201ENST00000369406 TMEM243Q9BU79 118 aa9.77□□□□□ -0.85
HMGCS2-201ENST00000369406 DYNC2H1Q8NCM8 4307 aaKnown RBP9.77□□□□□ -0.85
HMGCS2-201ENST00000369406 PLNP26678 52 aa9.76□□□□□ -0.85
HMGCS2-201ENST00000369406 Q8N3U1 123 aa9.76□□□□□ -0.85
HMGCS2-201ENST00000369406 VCX2Q9H322 139 aa9.76□□□□□ -0.85
HMGCS2-201ENST00000369406 TRBV25-1A0A075B6N4 114 aa9.75□□□□□ -0.85
HMGCS2-201ENST00000369406 BVES-AS1Q5T3Y7 98 aa9.75□□□□□ -0.85
HMGCS2-201ENST00000369406 IGLV4-60A0A075B6I1 120 aa9.75□□□□□ -0.85
HMGCS2-201ENST00000369406 TIMM21Q9BVV7 248 aa9.75□□□□□ -0.85
HMGCS2-201ENST00000369406 DNAH7Q8WXX0 4024 aa9.74□□□□□ -0.85
HMGCS2-201ENST00000369406 COX8AP10176 69 aa9.74□□□□□ -0.85
HMGCS2-201ENST00000369406 NMUP48645 174 aa9.74□□□□□ -0.85
HMGCS2-201ENST00000369406 CHAC1Q9BUX1 264 aa9.74□□□□□ -0.85
HMGCS2-201ENST00000369406 TRAV8-6A0A0B4J262 113 aa9.74□□□□□ -0.85
HMGCS2-201ENST00000369406 MRPS36P82909 103 aaKnown RBP9.74□□□□□ -0.85
HMGCS2-201ENST00000369406 CDC42SE2Q9NRR3 84 aa9.74□□□□□ -0.85
HMGCS2-201ENST00000369406 TEX48A0A1B0GUV7 120 aa9.73□□□□□ -0.85
HMGCS2-201ENST00000369406 NFE4Q86UQ8 179 aa9.73□□□□□ -0.85
HMGCS2-201ENST00000369406 MAPKAPK5-AS1Q8N8E1 139 aa9.73□□□□□ -0.85
HMGCS2-201ENST00000369406 C11orf45Q8TAV5 145 aa9.73□□□□□ -0.85
HMGCS2-201ENST00000369406 CHCHD5Q9BSY4 110 aa9.73□□□□□ -0.85
HMGCS2-201ENST00000369406 ZNF22P17026 224 aaPredicted RBP9.73□□□□□ -0.85
HMGCS2-201ENST00000369406 C2orf91Q6ZV80 131 aa9.73□□□□□ -0.85
HMGCS2-201ENST00000369406 UBE2D1P51668 147 aa9.72□□□□□ -0.85
HMGCS2-201ENST00000369406 UBE2L6O14933 153 aa9.72□□□□□ -0.85
HMGCS2-201ENST00000369406 TSPEAR-AS2P59090 65 aa9.72□□□□□ -0.85
HMGCS2-201ENST00000369406 COX6A2Q02221 97 aa9.72□□□□□ -0.85
HMGCS2-201ENST00000369406 CSDC2Q9Y534 153 aaKnown RBP9.72□□□□□ -0.85
HMGCS2-201ENST00000369406 DGAT2L7PQ6IED9 249 aa9.71□□□□□ -0.85
HMGCS2-201ENST00000369406 SLC25A34Q6PIV7 304 aa9.71□□□□□ -0.85
HMGCS2-201ENST00000369406 BOD1L2Q8IYS8 172 aa9.71□□□□□ -0.85
HMGCS2-201ENST00000369406 PLECQ15149 4684 aaKnown RBP9.71□□□□□ -0.86
HMGCS2-201ENST00000369406 TMEM170BQ5T4T1 132 aa9.71□□□□□ -0.86
HMGCS2-201ENST00000369406 OR5A1Q8NGJ0 315 aa9.71□□□□□ -0.86
HMGCS2-201ENST00000369406 ICOSQ9Y6W8 199 aa9.7□□□□□ -0.86
HMGCS2-201ENST00000369406 TENM2Q9NT68 2774 aa9.7□□□□□ -0.86
HMGCS2-201ENST00000369406 IGHV3-64A0A075B6Q5 118 aa9.69□□□□□ -0.86
HMGCS2-201ENST00000369406 DEFB131BA0A096LNP1 70 aa9.69□□□□□ -0.86
HMGCS2-201ENST00000369406 MRPL23Q16540 153 aaKnown RBP9.69□□□□□ -0.86
HMGCS2-201ENST00000369406 PAPPA-AS1Q5QFB9 102 aa9.69□□□□□ -0.86
HMGCS2-201ENST00000369406 LINC00242Q5T6M2 205 aa9.69□□□□□ -0.86
HMGCS2-201ENST00000369406 TRAV13-1A0A0B4J241 112 aa9.68□□□□□ -0.86
HMGCS2-201ENST00000369406 TMEM223A0PJW6 202 aa9.68□□□□□ -0.86
HMGCS2-201ENST00000369406 H7C423 109 aa9.68□□□□□ -0.86
HMGCS2-201ENST00000369406 E9PLD3 99 aa9.68□□□□□ -0.86
HMGCS2-201ENST00000369406 STARD9Q9P2P6 4700 aa9.68□□□□□ -0.86
HMGCS2-201ENST00000369406 IGKV3OR2-268A0A0C4DH90 116 aa9.67□□□□□ -0.86
HMGCS2-201ENST00000369406 GAGE10A6NGK3 116 aa9.67□□□□□ -0.86
HMGCS2-201ENST00000369406 DNAH1Q9P2D7 4330 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms