RNA–Protein interactions for RNA: ENST00000369091.6

PRDM1-202, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 2,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-202ENST00000369091 FAM222AQ5U5X8 452 aa13.59□□□□□ -0.23
PRDM1-202ENST00000369091 SERP2Q8N6R1 65 aa13.59□□□□□ -0.23
PRDM1-202ENST00000369091 Q8NA96 180 aa13.59□□□□□ -0.23
PRDM1-202ENST00000369091 Q6ZSN1 163 aa13.58□□□□□ -0.24
PRDM1-202ENST00000369091 F5H768 121 aa13.58□□□□□ -0.24
PRDM1-202ENST00000369091 LINC00846Q9NV44 126 aa13.57□□□□□ -0.24
PRDM1-202ENST00000369091 LINC01561Q8N1V8 128 aa13.57□□□□□ -0.24
PRDM1-202ENST00000369091 MOB4Q9Y3A3 225 aa13.57□□□□□ -0.24
PRDM1-202ENST00000369091 USP17L23D6RBM5 183 aa13.54□□□□□ -0.24
PRDM1-202ENST00000369091 IGF2RP11717 2491 aa13.54□□□□□ -0.24
PRDM1-202ENST00000369091 A0A087WYN8 130 aa13.54□□□□□ -0.24
PRDM1-202ENST00000369091 SYNJ2BPP57105 145 aa13.53□□□□□ -0.24
PRDM1-202ENST00000369091 C10orf105Q8TEF2 133 aa13.53□□□□□ -0.24
PRDM1-202ENST00000369091 DOPEY2Q9Y3R5 2298 aa13.53□□□□□ -0.24
PRDM1-202ENST00000369091 RBMY1A1P0DJD3 496 aaKnown RBP13.53□□□□□ -0.24
PRDM1-202ENST00000369091 RBMY1CP0DJD4 496 aa13.53□□□□□ -0.24
PRDM1-202ENST00000369091 RBMY1FQ15415 496 aaKnown RBP13.53□□□□□ -0.24
PRDM1-202ENST00000369091 LY6EQ16553 131 aa13.53□□□□□ -0.24
PRDM1-202ENST00000369091 SORL1Q92673 2214 aa13.53□□□□□ -0.24
PRDM1-202ENST00000369091 IGLV5-45A0A087WSX0 123 aa13.52□□□□□ -0.24
PRDM1-202ENST00000369091 Q6JHZ5 121 aa13.52□□□□□ -0.24
PRDM1-202ENST00000369091 COL6A6A6NMZ7 2263 aa13.52□□□□□ -0.24
PRDM1-202ENST00000369091 IGLV5-39A0A0G2JS06 123 aa13.52□□□□□ -0.25
PRDM1-202ENST00000369091 CACNA1AO00555 2505 aa13.52□□□□□ -0.25
PRDM1-202ENST00000369091 IGHV3OR16-12A0A075B7B8 117 aa13.51□□□□□ -0.25
PRDM1-202ENST00000369091 CDSNQ15517 529 aa13.51□□□□□ -0.25
PRDM1-202ENST00000369091 FHL2Q14192 279 aa13.51□□□□□ -0.25
PRDM1-202ENST00000369091 C11orf71Q6IPW1 123 aa13.51□□□□□ -0.25
PRDM1-202ENST00000369091 HILS1P60008 231 aa13.5□□□□□ -0.25
PRDM1-202ENST00000369091 LINC00242Q5T6M2 205 aa13.5□□□□□ -0.25
PRDM1-202ENST00000369091 BRD3OSQ6XYD6 125 aa13.5□□□□□ -0.25
PRDM1-202ENST00000369091 SMIM1B2RUZ4 78 aa13.49□□□□□ -0.25
PRDM1-202ENST00000369091 HIST2H2BCQ6DN03 193 aa13.49□□□□□ -0.25
PRDM1-202ENST00000369091 HIST2H2BDQ6DRA6 164 aa13.49□□□□□ -0.25
PRDM1-202ENST00000369091 USMG5Q96IX5 58 aa13.49□□□□□ -0.25
PRDM1-202ENST00000369091 NCR3O14931 201 aa13.48□□□□□ -0.25
PRDM1-202ENST00000369091 DGAT2L7PQ6IED9 249 aa13.48□□□□□ -0.25
PRDM1-202ENST00000369091 PTPRQQ9UMZ3 2332 aa13.48□□□□□ -0.25
PRDM1-202ENST00000369091 LINC00337Q8N6G1 96 aa13.48□□□□□ -0.25
PRDM1-202ENST00000369091 PIMREGQ9BSJ6 248 aa13.47□□□□□ -0.25
PRDM1-202ENST00000369091 WFDC9Q8NEX5 89 aa13.47□□□□□ -0.25
PRDM1-202ENST00000369091 RPL28P46779 137 aaKnown RBP13.46□□□□□ -0.25
PRDM1-202ENST00000369091 BLCAPP62952 87 aa13.46□□□□□ -0.25
PRDM1-202ENST00000369091 COPS9Q8WXC6 57 aa13.46□□□□□ -0.25
PRDM1-202ENST00000369091 CRPP02741 224 aa13.45□□□□□ -0.26
PRDM1-202ENST00000369091 AKAP6Q13023 2319 aa13.45□□□□□ -0.26
PRDM1-202ENST00000369091 SLPIP03973 132 aa13.45□□□□□ -0.26
PRDM1-202ENST00000369091 SNRPD3P62318 126 aaKnown RBP13.45□□□□□ -0.26
PRDM1-202ENST00000369091 IGKV2-28A0A075B6P5 120 aa13.44□□□□□ -0.26
PRDM1-202ENST00000369091 IGKV2D-28P01615 120 aa13.44□□□□□ -0.26
PRDM1-202ENST00000369091 ACACBO00763 2458 aa13.44□□□□□ -0.26
PRDM1-202ENST00000369091 ZNF415Q09FC8 603 aa13.43□□□□□ -0.26
PRDM1-202ENST00000369091 SMIM11BQ8TCY0 68 aa13.43□□□□□ -0.26
PRDM1-202ENST00000369091 SPTAN1Q13813 2472 aaKnown RBP13.43□□□□□ -0.26
PRDM1-202ENST00000369091 CCL21O00585 134 aa13.43□□□□□ -0.26
PRDM1-202ENST00000369091 TRAV13-2A0A0B4J235 113 aa13.42□□□□□ -0.26
PRDM1-202ENST00000369091 K7EQG2 157 aa13.42□□□□□ -0.26
PRDM1-202ENST00000369091 OBSCN-AS1Q96MR7 158 aa13.42□□□□□ -0.26
PRDM1-202ENST00000369091 COL12A1Q99715 3063 aa13.41□□□□□ -0.26
PRDM1-202ENST00000369091 LECT2O14960 151 aa13.41□□□□□ -0.26
PRDM1-202ENST00000369091 TRAV23DV6A0A075B6W5 121 aa13.41□□□□□ -0.26
PRDM1-202ENST00000369091 GHRHP01286 108 aa13.41□□□□□ -0.26
PRDM1-202ENST00000369091 NBASA2RRP1 2371 aa13.41□□□□□ -0.26
PRDM1-202ENST00000369091 BPESC1Q9GZL8 116 aa13.4□□□□□ -0.26
PRDM1-202ENST00000369091 SPTA1P02549 2419 aa13.4□□□□□ -0.26
PRDM1-202ENST00000369091 A0A1W2PPR1 153 aa13.4□□□□□ -0.26
PRDM1-202ENST00000369091 K7EMT4 169 aa13.4□□□□□ -0.26
PRDM1-202ENST00000369091 LMO4P61968 165 aa13.4□□□□□ -0.26
PRDM1-202ENST00000369091 MIR7-3HGQ8N6C7 128 aa13.4□□□□□ -0.26
PRDM1-202ENST00000369091 TLN1Q9Y490 2541 aaKnown RBP13.39□□□□□ -0.27
PRDM1-202ENST00000369091 PRORYQ9H606 182 aa13.39□□□□□ -0.27
PRDM1-202ENST00000369091 VPS13CQ709C8 3753 aa13.39□□□□□ -0.27
PRDM1-202ENST00000369091 Q96MF0 132 aa13.39□□□□□ -0.27
PRDM1-202ENST00000369091 SND1-IT1Q9HBX3 110 aa13.39□□□□□ -0.27
PRDM1-202ENST00000369091 EPG5Q9HCE0 2579 aa13.39□□□□□ -0.27
PRDM1-202ENST00000369091 H3BUA1 57 aa13.38□□□□□ -0.27
PRDM1-202ENST00000369091 C10orf99Q6UWK7 81 aa13.38□□□□□ -0.27
PRDM1-202ENST00000369091 H3BUX3 64 aa13.37□□□□□ -0.27
PRDM1-202ENST00000369091 FAM19A1Q7Z5A9 133 aa13.37□□□□□ -0.27
PRDM1-202ENST00000369091 C20orf197Q8N268 126 aa13.37□□□□□ -0.27
PRDM1-202ENST00000369091 IGLV1-40P01703 118 aa13.36□□□□□ -0.27
PRDM1-202ENST00000369091 TMEM243Q9BU79 118 aa13.36□□□□□ -0.27
PRDM1-202ENST00000369091 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.36□□□□□ -0.27
PRDM1-202ENST00000369091 PFN2P35080 140 aa13.36□□□□□ -0.27
PRDM1-202ENST00000369091 CFHR3Q02985 330 aa13.35□□□□□ -0.27
PRDM1-202ENST00000369091 OVOL2Q9BRP0 275 aa13.35□□□□□ -0.27
PRDM1-202ENST00000369091 IGHV3-53P01767 116 aa13.35□□□□□ -0.27
PRDM1-202ENST00000369091 PF4P02776 101 aa13.35□□□□□ -0.27
PRDM1-202ENST00000369091 K7ENP7 123 aa13.34□□□□□ -0.27
PRDM1-202ENST00000369091 SS18Q15532 418 aa13.34□□□□□ -0.27
PRDM1-202ENST00000369091 RPL36AP83881 106 aaKnown RBP13.34□□□□□ -0.27
PRDM1-202ENST00000369091 RPL36ALQ969Q0 106 aaKnown RBP13.34□□□□□ -0.27
PRDM1-202ENST00000369091 IGHV4-38-2P0DP08 117 aa13.33□□□□□ -0.28
PRDM1-202ENST00000369091 ENHOQ6UWT2 76 aa13.33□□□□□ -0.28
PRDM1-202ENST00000369091 MRAPQ8TCY5 172 aa13.33□□□□□ -0.28
PRDM1-202ENST00000369091 TOMM7Q9P0U1 55 aa13.33□□□□□ -0.28
PRDM1-202ENST00000369091 RBMY1BA6NDE4 496 aaKnown RBP13.32□□□□□ -0.28
PRDM1-202ENST00000369091 RBMY1EA6NEQ0 496 aaKnown RBP13.32□□□□□ -0.28
PRDM1-202ENST00000369091 RBMY1DP0C7P1 496 aaKnown RBP13.32□□□□□ -0.28
PRDM1-202ENST00000369091 FBXL19-AS1Q494R0 122 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms