RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 GAGE12BA1L429 117 aa6.15□□□□□ -1.43
SNX27-201ENST00000368838 GAGE7O76087 117 aa6.15□□□□□ -1.43
SNX27-201ENST00000368838 ATP5G1P05496 136 aa6.15□□□□□ -1.43
SNX27-201ENST00000368838 GAGE12FP0CL80 117 aa6.15□□□□□ -1.43
SNX27-201ENST00000368838 GAGE12GP0CL81 117 aa6.15□□□□□ -1.43
SNX27-201ENST00000368838 GAGE12IP0CL82 117 aa6.15□□□□□ -1.43
SNX27-201ENST00000368838 P0DMU3 169 aa6.15□□□□□ -1.43
SNX27-201ENST00000368838 FAM231AP0DMU4 169 aa6.15□□□□□ -1.43
SNX27-201ENST00000368838 FAM231CP0DMU5 169 aa6.15□□□□□ -1.43
SNX27-201ENST00000368838 GCSHP23434 173 aa6.15□□□□□ -1.43
SNX27-201ENST00000368838 S100A12P80511 92 aa6.15□□□□□ -1.43
SNX27-201ENST00000368838 SMAGPQ0VAQ4 97 aa6.15□□□□□ -1.43
SNX27-201ENST00000368838 PAPPA-AS1Q5QFB9 102 aa6.15□□□□□ -1.43
SNX27-201ENST00000368838 FAM222AQ5U5X8 452 aa6.15□□□□□ -1.43
SNX27-201ENST00000368838 C2orf66Q6UXQ4 117 aa6.15□□□□□ -1.43
SNX27-201ENST00000368838 SH2D6Q7Z4S9 175 aa6.15□□□□□ -1.43
SNX27-201ENST00000368838 PRADC1Q9BSG0 188 aa6.15□□□□□ -1.43
SNX27-201ENST00000368838 H0Y8G0 127 aa6.14□□□□□ -1.43
SNX27-201ENST00000368838 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.14□□□□□ -1.43
SNX27-201ENST00000368838 NUDT3O95989 172 aa6.14□□□□□ -1.43
SNX27-201ENST00000368838 TIRAPP58753 221 aa6.14□□□□□ -1.43
SNX27-201ENST00000368838 MRPL52Q86TS9 123 aaKnown RBP6.14□□□□□ -1.43
SNX27-201ENST00000368838 HHLA3Q9XRX5 114 aa6.14□□□□□ -1.43
SNX27-201ENST00000368838 CBY1Q9Y3M2 126 aa6.14□□□□□ -1.43
SNX27-201ENST00000368838 KRTAP9-6A0A140TA67 174 aa6.13□□□□□ -1.43
SNX27-201ENST00000368838 C9orf118A6NHY6 69 aa6.13□□□□□ -1.43
SNX27-201ENST00000368838 IGLL5B9A064 214 aa6.13□□□□□ -1.43
SNX27-201ENST00000368838 KRTDAPP60985 99 aa6.13□□□□□ -1.43
SNX27-201ENST00000368838 MRPS36P82909 103 aaKnown RBP6.13□□□□□ -1.43
SNX27-201ENST00000368838 Q8N3U1 123 aa6.13□□□□□ -1.43
SNX27-201ENST00000368838 SPANXA1Q9NS26 97 aa6.13□□□□□ -1.43
SNX27-201ENST00000368838 KIAA1109Q2LD37 5005 aa6.13□□□□□ -1.43
SNX27-201ENST00000368838 DNAH17Q9UFH2 4485 aa6.12□□□□□ -1.43
SNX27-201ENST00000368838 TRGV4A0A0C4DH28 118 aa6.12□□□□□ -1.43
SNX27-201ENST00000368838 ZNRF2Q8NHG8 242 aa6.12□□□□□ -1.43
SNX27-201ENST00000368838 CHCHD7Q9BUK0 85 aa6.12□□□□□ -1.43
SNX27-201ENST00000368838 DNAH2Q9P225 4427 aa6.12□□□□□ -1.43
SNX27-201ENST00000368838 FAT2Q9NYQ8 4349 aa6.11□□□□□ -1.43
SNX27-201ENST00000368838 PCLOQ9Y6V0 5065 aa6.11□□□□□ -1.43
SNX27-201ENST00000368838 TRAV9-2A0A087WT02 112 aa6.11□□□□□ -1.43
SNX27-201ENST00000368838 A0A087WX48 190 aa6.11□□□□□ -1.43
SNX27-201ENST00000368838 IGHV3-73A0A0B4J1V6 119 aa6.11□□□□□ -1.43
SNX27-201ENST00000368838 ZNF25P17030 456 aaPredicted RBP6.11□□□□□ -1.43
SNX27-201ENST00000368838 DAD1P61803 113 aa6.11□□□□□ -1.43
SNX27-201ENST00000368838 LINC00173Q6ZV60 143 aa6.11□□□□□ -1.43
SNX27-201ENST00000368838 FAM19A3Q7Z5A8 133 aa6.11□□□□□ -1.43
SNX27-201ENST00000368838 SCGB3A1Q96QR1 104 aa6.11□□□□□ -1.43
SNX27-201ENST00000368838 APLNQ9ULZ1 77 aa6.11□□□□□ -1.43
SNX27-201ENST00000368838 F8VRH5 84 aa6.1□□□□□ -1.43
SNX27-201ENST00000368838 DEFB130BP0DP73 79 aa6.1□□□□□ -1.43
SNX27-201ENST00000368838 DEFB130AP0DP74 79 aa6.1□□□□□ -1.43
SNX27-201ENST00000368838 PLNP26678 52 aa6.1□□□□□ -1.43
SNX27-201ENST00000368838 PMVKQ15126 192 aa6.1□□□□□ -1.43
SNX27-201ENST00000368838 DGAT2L7PQ6IED9 249 aa6.1□□□□□ -1.43
SNX27-201ENST00000368838 Q6ZN92 141 aa6.1□□□□□ -1.43
SNX27-201ENST00000368838 Q6ZTC4 211 aa6.1□□□□□ -1.43
SNX27-201ENST00000368838 AMELXQ99217 191 aa6.1□□□□□ -1.43
SNX27-201ENST00000368838 Q9UF83 564 aa6.1□□□□□ -1.43
SNX27-201ENST00000368838 CELA1Q9UNI1 258 aa6.1□□□□□ -1.43
SNX27-201ENST00000368838 TRBV6-8A0A0A6YYG3 113 aa6.09□□□□□ -1.43
SNX27-201ENST00000368838 A0A1B0GUV1 79 aa6.09□□□□□ -1.43
SNX27-201ENST00000368838 PKIAP61925 76 aa6.09□□□□□ -1.43
SNX27-201ENST00000368838 MRPL23Q16540 153 aaKnown RBP6.09□□□□□ -1.43
SNX27-201ENST00000368838 C12orf74Q32Q52 190 aa6.09□□□□□ -1.43
SNX27-201ENST00000368838 NFE4Q86UQ8 179 aa6.09□□□□□ -1.43
SNX27-201ENST00000368838 ZNF664Q8N3J9 261 aa6.09□□□□□ -1.43
SNX27-201ENST00000368838 BAALCQ8WXS3 180 aa6.09□□□□□ -1.43
SNX27-201ENST00000368838 VSIG2Q96IQ7 327 aa6.09□□□□□ -1.43
SNX27-201ENST00000368838 VAMP8Q9BV40 100 aa6.09□□□□□ -1.43
SNX27-201ENST00000368838 VCX2Q9H322 139 aa6.09□□□□□ -1.43
SNX27-201ENST00000368838 UBE2D4Q9Y2X8 147 aa6.09□□□□□ -1.43
SNX27-201ENST00000368838 PKHD1P08F94 4074 aa6.09□□□□□ -1.43
SNX27-201ENST00000368838 F8WDY8 70 aa6.08□□□□□ -1.44
SNX27-201ENST00000368838 PRSS1P07477 247 aa6.08□□□□□ -1.44
SNX27-201ENST00000368838 PCP4P48539 62 aa6.08□□□□□ -1.44
SNX27-201ENST00000368838 EMP1P54849 157 aa6.08□□□□□ -1.44
SNX27-201ENST00000368838 NTM-AS1Q6ZSK4 140 aa6.08□□□□□ -1.44
SNX27-201ENST00000368838 NEGR1Q7Z3B1 354 aa6.08□□□□□ -1.44
SNX27-201ENST00000368838 ATP6V0E2Q8NHE4 81 aa6.08□□□□□ -1.44
SNX27-201ENST00000368838 FAM104AQ969W3 186 aa6.08□□□□□ -1.44
SNX27-201ENST00000368838 PKD1P98161 4303 aa6.07□□□□□ -1.44
SNX27-201ENST00000368838 DYNC1H1Q14204 4646 aaKnown RBP6.07□□□□□ -1.44
SNX27-201ENST00000368838 TRBV25-1A0A075B6N4 114 aa6.07□□□□□ -1.44
SNX27-201ENST00000368838 TSTD3H0UI37 97 aa6.07□□□□□ -1.44
SNX27-201ENST00000368838 M0R2N4 97 aa6.07□□□□□ -1.44
SNX27-201ENST00000368838 CCL25O15444 150 aa6.07□□□□□ -1.44
SNX27-201ENST00000368838 DLEU1O43261 78 aa6.07□□□□□ -1.44
SNX27-201ENST00000368838 PAX4O43316 350 aa6.07□□□□□ -1.44
SNX27-201ENST00000368838 DPM2O94777 84 aa6.07□□□□□ -1.44
SNX27-201ENST00000368838 CST9LQ9H4G1 147 aa6.07□□□□□ -1.44
SNX27-201ENST00000368838 IGLV4-3A0A075B6K6 122 aa6.06□□□□□ -1.44
SNX27-201ENST00000368838 TRAV10A0A0B4J240 114 aa6.06□□□□□ -1.44
SNX27-201ENST00000368838 GAGE12JA6NER3 117 aa6.06□□□□□ -1.44
SNX27-201ENST00000368838 IGKCP01834 107 aa6.06□□□□□ -1.44
SNX27-201ENST00000368838 RPL39P62891 51 aaKnown RBP6.06□□□□□ -1.44
SNX27-201ENST00000368838 SEC11AP67812 179 aa6.06□□□□□ -1.44
SNX27-201ENST00000368838 GAGE1Q13065 139 aa6.06□□□□□ -1.44
SNX27-201ENST00000368838 GAGE4Q13068 117 aa6.06□□□□□ -1.44
SNX27-201ENST00000368838 GAGE5Q13069 117 aa6.06□□□□□ -1.44
SNX27-201ENST00000368838 TMEM243Q9BU79 118 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms