RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 GAGE6Q13070 117 aa10.1□□□□□ -0.79
SMPDL3A-201ENST00000368440 CDPF1Q6NVV7 123 aa10.1□□□□□ -0.79
SMPDL3A-201ENST00000368440 NFE4Q86UQ8 179 aa10.1□□□□□ -0.79
SMPDL3A-201ENST00000368440 C12orf57Q99622 126 aa10.1□□□□□ -0.79
SMPDL3A-201ENST00000368440 COTL1Q14019 142 aa10.1□□□□□ -0.79
SMPDL3A-201ENST00000368440 LINC00518Q8N0U6 118 aa10.1□□□□□ -0.79
SMPDL3A-201ENST00000368440 Q8N976 141 aa10.1□□□□□ -0.79
SMPDL3A-201ENST00000368440 TMEM70Q9BUB7 260 aa10.1□□□□□ -0.79
SMPDL3A-201ENST00000368440 KLK12Q9UKR0 248 aa10.1□□□□□ -0.79
SMPDL3A-201ENST00000368440 BIRC6Q9NR09 4857 aa10.09□□□□□ -0.79
SMPDL3A-201ENST00000368440 A0A096LNJ9 63 aa10.09□□□□□ -0.79
SMPDL3A-201ENST00000368440 LAGE3Q14657 143 aa10.09□□□□□ -0.79
SMPDL3A-201ENST00000368440 CHCHD7Q9BUK0 85 aa10.09□□□□□ -0.79
SMPDL3A-201ENST00000368440 PRSS47A8MTI9 375 aa10.08□□□□□ -0.8
SMPDL3A-201ENST00000368440 HBDP02042 147 aa10.08□□□□□ -0.8
SMPDL3A-201ENST00000368440 C3orf79P0CE67 100 aa10.08□□□□□ -0.8
SMPDL3A-201ENST00000368440 SMIM6P0DI80 62 aa10.08□□□□□ -0.8
SMPDL3A-201ENST00000368440 TMEM243Q9BU79 118 aa10.08□□□□□ -0.8
SMPDL3A-201ENST00000368440 POLR2KP53803 58 aaKnown RBP10.07□□□□□ -0.8
SMPDL3A-201ENST00000368440 RBX1P62877 108 aa10.07□□□□□ -0.8
SMPDL3A-201ENST00000368440 JOSD1Q15040 202 aaPredicted RBP10.07□□□□□ -0.8
SMPDL3A-201ENST00000368440 PKHD1P08F94 4074 aa10.07□□□□□ -0.8
SMPDL3A-201ENST00000368440 FCER1GP30273 86 aa10.06□□□□□ -0.8
SMPDL3A-201ENST00000368440 UBE2WQ96B02 151 aa10.06□□□□□ -0.8
SMPDL3A-201ENST00000368440 LINC01546A6NGU7 62 aa10.06□□□□□ -0.8
SMPDL3A-201ENST00000368440 I3L3M4 83 aa10.06□□□□□ -0.8
SMPDL3A-201ENST00000368440 VCYO14598 125 aa10.06□□□□□ -0.8
SMPDL3A-201ENST00000368440 TSHBP01222 138 aa10.06□□□□□ -0.8
SMPDL3A-201ENST00000368440 ANGP03950 147 aaKnown RBP10.06□□□□□ -0.8
SMPDL3A-201ENST00000368440 HSPB8Q9UJY1 196 aa10.06□□□□□ -0.8
SMPDL3A-201ENST00000368440 TRAV8-3A0A0A6YYJ7 113 aa10.05□□□□□ -0.8
SMPDL3A-201ENST00000368440 PKIAP61925 76 aa10.05□□□□□ -0.8
SMPDL3A-201ENST00000368440 ENHOQ6UWT2 76 aa10.05□□□□□ -0.8
SMPDL3A-201ENST00000368440 KIR2DL4Q99706 377 aa10.05□□□□□ -0.8
SMPDL3A-201ENST00000368440 IGLV4-60A0A075B6I1 120 aa10.04□□□□□ -0.8
SMPDL3A-201ENST00000368440 TRBV27A0A0K0K1C4 114 aa10.04□□□□□ -0.8
SMPDL3A-201ENST00000368440 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.04□□□□□ -0.8
SMPDL3A-201ENST00000368440 A0A087WTM6 91 aa10.04□□□□□ -0.8
SMPDL3A-201ENST00000368440 IGKV2-29A2NJV5 120 aaPredicted RBP10.04□□□□□ -0.8
SMPDL3A-201ENST00000368440 PSCAO43653 123 aa10.04□□□□□ -0.8
SMPDL3A-201ENST00000368440 KRTAP10-2P60368 255 aa10.04□□□□□ -0.8
SMPDL3A-201ENST00000368440 ORMDL2Q53FV1 153 aa10.04□□□□□ -0.8
SMPDL3A-201ENST00000368440 CLPSL2Q6UWE3 100 aa10.04□□□□□ -0.8
SMPDL3A-201ENST00000368440 SPATA12Q7Z6I5 190 aa10.04□□□□□ -0.8
SMPDL3A-201ENST00000368440 C20orf203Q8NBC4 194 aa10.04□□□□□ -0.8
SMPDL3A-201ENST00000368440 MAP1LC3CQ9BXW4 147 aa10.04□□□□□ -0.8
SMPDL3A-201ENST00000368440 UBE2L6O14933 153 aa10.03□□□□□ -0.8
SMPDL3A-201ENST00000368440 LRCOL1A6NCL2 159 aa10.02□□□□□ -0.8
SMPDL3A-201ENST00000368440 FUSP35637 526 aaKnown RBP eCLIP10.02□□□□□ -0.8
SMPDL3A-201ENST00000368440 RPL32P62910 135 aaKnown RBP10.02□□□□□ -0.8
SMPDL3A-201ENST00000368440 ATOH7Q8N100 152 aa10.02□□□□□ -0.8
SMPDL3A-201ENST00000368440 LINC00269Q8N2A0 174 aa10.02□□□□□ -0.8
SMPDL3A-201ENST00000368440 MAPKAPK5-AS1Q8N8E1 139 aa10.02□□□□□ -0.8
SMPDL3A-201ENST00000368440 PMCHL2Q9BQD1 86 aa10.02□□□□□ -0.8
SMPDL3A-201ENST00000368440 IGKV2D-24A0A075B6R9 120 aa10.02□□□□□ -0.81
SMPDL3A-201ENST00000368440 SYS1-DBNDD2H3BUS1 97 aa10.02□□□□□ -0.81
SMPDL3A-201ENST00000368440 IFI27L1Q96BM0 104 aa10.02□□□□□ -0.81
SMPDL3A-201ENST00000368440 DYNC1H1Q14204 4646 aaKnown RBP10.01□□□□□ -0.81
SMPDL3A-201ENST00000368440 A0A1B0GUV1 79 aa10.01□□□□□ -0.81
SMPDL3A-201ENST00000368440 CRPP02741 224 aa10.01□□□□□ -0.81
SMPDL3A-201ENST00000368440 RPL39P62891 51 aaKnown RBP10.01□□□□□ -0.81
SMPDL3A-201ENST00000368440 WFDC2Q14508 124 aa10.01□□□□□ -0.81
SMPDL3A-201ENST00000368440 C2orf66Q6UXQ4 117 aa10.01□□□□□ -0.81
SMPDL3A-201ENST00000368440 TM2D2Q9BX73 214 aa10.01□□□□□ -0.81
SMPDL3A-201ENST00000368440 PRR34Q9NV39 138 aa10.01□□□□□ -0.81
SMPDL3A-201ENST00000368440 SCGB3A1Q96QR1 104 aa10□□□□□ -0.81
SMPDL3A-201ENST00000368440 K7EMI3 77 aa9.99□□□□□ -0.81
SMPDL3A-201ENST00000368440 FGF6P10767 208 aa9.99□□□□□ -0.81
SMPDL3A-201ENST00000368440 REG3AQ06141 175 aa9.99□□□□□ -0.81
SMPDL3A-201ENST00000368440 TOMM6Q96B49 74 aa9.99□□□□□ -0.81
SMPDL3A-201ENST00000368440 RMI2Q96E14 147 aa9.99□□□□□ -0.81
SMPDL3A-201ENST00000368440 PCP4L1A6NKN8 68 aa9.98□□□□□ -0.81
SMPDL3A-201ENST00000368440 LECT2O14960 151 aa9.98□□□□□ -0.81
SMPDL3A-201ENST00000368440 PRSS1P07477 247 aa9.98□□□□□ -0.81
SMPDL3A-201ENST00000368440 AMMECR1LQ6DCA0 310 aa9.98□□□□□ -0.81
SMPDL3A-201ENST00000368440 C1orf43Q9BWL3 253 aa9.98□□□□□ -0.81
SMPDL3A-201ENST00000368440 CYSLTR1Q9Y271 337 aa9.98□□□□□ -0.81
SMPDL3A-201ENST00000368440 H7C423 109 aa9.98□□□□□ -0.81
SMPDL3A-201ENST00000368440 EREGO14944 169 aa9.98□□□□□ -0.81
SMPDL3A-201ENST00000368440 MIAQ16674 131 aa9.98□□□□□ -0.81
SMPDL3A-201ENST00000368440 BAALCQ8WXS3 180 aa9.98□□□□□ -0.81
SMPDL3A-201ENST00000368440 DNAH5Q8TE73 4624 aa9.97□□□□□ -0.81
SMPDL3A-201ENST00000368440 IGLV10-54A0A075B6I4 117 aa9.97□□□□□ -0.81
SMPDL3A-201ENST00000368440 C16orf90A8MZG2 172 aa9.97□□□□□ -0.81
SMPDL3A-201ENST00000368440 S100A12P80511 92 aa9.97□□□□□ -0.81
SMPDL3A-201ENST00000368440 PET117Q6UWS5 81 aa9.97□□□□□ -0.81
SMPDL3A-201ENST00000368440 COX11Q9Y6N1 276 aa9.97□□□□□ -0.81
SMPDL3A-201ENST00000368440 C20orf202A1L168 122 aa9.96□□□□□ -0.81
SMPDL3A-201ENST00000368440 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.96□□□□□ -0.81
SMPDL3A-201ENST00000368440 ATP5LO75964 103 aa9.96□□□□□ -0.81
SMPDL3A-201ENST00000368440 KRTAP26-1Q6PEX3 210 aa9.96□□□□□ -0.81
SMPDL3A-201ENST00000368440 Q6ZN92 141 aa9.96□□□□□ -0.82
SMPDL3A-201ENST00000368440 Q8N814 137 aa9.96□□□□□ -0.82
SMPDL3A-201ENST00000368440 PAM16Q9Y3D7 125 aa9.96□□□□□ -0.82
SMPDL3A-201ENST00000368440 MAJINQ3KP22 176 aa9.95□□□□□ -0.82
SMPDL3A-201ENST00000368440 PRO1933Q9H354 126 aa9.95□□□□□ -0.82
SMPDL3A-201ENST00000368440 IGKV3OR2-268A0A0C4DH90 116 aa9.94□□□□□ -0.82
SMPDL3A-201ENST00000368440 ZNF25P17030 456 aaPredicted RBP9.94□□□□□ -0.82
SMPDL3A-201ENST00000368440 ZC2HC1BQ5TFG8 222 aa9.94□□□□□ -0.82
SMPDL3A-201ENST00000368440 TEX43Q6ZNM6 134 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms