RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 LOC105371267A0A1B0GV96 52 aa7.89□□□□□ -1.15
PTPRK-205ENST00000368213 ANAPC13Q9BS18 74 aa7.89□□□□□ -1.15
PTPRK-205ENST00000368213 Q6ZTC4 211 aa7.89□□□□□ -1.15
PTPRK-205ENST00000368213 BRCA2P51587 3418 aa7.88□□□□□ -1.15
PTPRK-205ENST00000368213 KRTAP24-1Q3LI83 254 aa7.88□□□□□ -1.15
PTPRK-205ENST00000368213 NDUFC2O95298 119 aa7.88□□□□□ -1.15
PTPRK-205ENST00000368213 PCP4P48539 62 aa7.88□□□□□ -1.15
PTPRK-205ENST00000368213 SIGMAR1Q99720 223 aa7.88□□□□□ -1.15
PTPRK-205ENST00000368213 C12orf74Q32Q52 190 aa7.88□□□□□ -1.15
PTPRK-205ENST00000368213 FASNP49327 2511 aaKnown RBP7.88□□□□□ -1.15
PTPRK-205ENST00000368213 CRIP2P52943 208 aaPredicted RBP7.88□□□□□ -1.15
PTPRK-205ENST00000368213 LINC00173Q6ZV60 143 aa7.88□□□□□ -1.15
PTPRK-205ENST00000368213 M0QY20 66 aa7.88□□□□□ -1.15
PTPRK-205ENST00000368213 C1orf134Q5TEV5 83 aa7.88□□□□□ -1.15
PTPRK-205ENST00000368213 A4D1N5 150 aa7.87□□□□□ -1.15
PTPRK-205ENST00000368213 LRRK2Q5S007 2527 aa7.87□□□□□ -1.15
PTPRK-205ENST00000368213 LAMA3Q16787 3333 aa7.87□□□□□ -1.15
PTPRK-205ENST00000368213 IGLV5-52A0A0A0MRZ9 124 aa7.87□□□□□ -1.15
PTPRK-205ENST00000368213 C9orf118A6NHY6 69 aa7.87□□□□□ -1.15
PTPRK-205ENST00000368213 XAGE1AQ9HD64 81 aa7.87□□□□□ -1.15
PTPRK-205ENST00000368213 ANKRD29Q8N6D5 301 aa7.87□□□□□ -1.15
PTPRK-205ENST00000368213 KLLNB2CW77 178 aa7.86□□□□□ -1.15
PTPRK-205ENST00000368213 LINC00474Q9P2X8 69 aa7.86□□□□□ -1.15
PTPRK-205ENST00000368213 LOC107984640A0A0U1RRK4 108 aa7.86□□□□□ -1.15
PTPRK-205ENST00000368213 H0Y9J4 135 aa7.85□□□□□ -1.15
PTPRK-205ENST00000368213 NPSP0C0P6 89 aa7.85□□□□□ -1.15
PTPRK-205ENST00000368213 UBE2D4Q9Y2X8 147 aa7.85□□□□□ -1.15
PTPRK-205ENST00000368213 ABCA12Q86UK0 2595 aa7.85□□□□□ -1.15
PTPRK-205ENST00000368213 IGLV4-69A0A075B6H9 119 aa7.85□□□□□ -1.15
PTPRK-205ENST00000368213 E9PLD3 99 aa7.85□□□□□ -1.15
PTPRK-205ENST00000368213 NREPQ16612 68 aa7.85□□□□□ -1.15
PTPRK-205ENST00000368213 MRPL52Q86TS9 123 aaKnown RBP7.85□□□□□ -1.15
PTPRK-205ENST00000368213 ZNF580Q9UK33 172 aa7.85□□□□□ -1.15
PTPRK-205ENST00000368213 HTTP42858 3142 aa7.85□□□□□ -1.15
PTPRK-205ENST00000368213 FSHBP01225 129 aa7.85□□□□□ -1.15
PTPRK-205ENST00000368213 CD164L2Q6UWJ8 174 aa7.84□□□□□ -1.15
PTPRK-205ENST00000368213 MYO9AB2RTY4 2548 aa7.84□□□□□ -1.15
PTPRK-205ENST00000368213 PRR9Q5T870 116 aa7.84□□□□□ -1.15
PTPRK-205ENST00000368213 LINC00526Q96FQ7 95 aa7.84□□□□□ -1.15
PTPRK-205ENST00000368213 CDKN2A-AS1Q9UH64 79 aa7.84□□□□□ -1.15
PTPRK-205ENST00000368213 PPDPFLQ8WWR9 84 aa7.83□□□□□ -1.16
PTPRK-205ENST00000368213 MLST8Q9BVC4 326 aa7.83□□□□□ -1.16
PTPRK-205ENST00000368213 IGLV2-8P01709 118 aa7.83□□□□□ -1.16
PTPRK-205ENST00000368213 ZNF706Q9Y5V0 76 aaPredicted RBP7.83□□□□□ -1.16
PTPRK-205ENST00000368213 RNASE3P12724 160 aaKnown RBP7.83□□□□□ -1.16
PTPRK-205ENST00000368213 DOPEY1Q5JWR5 2465 aa7.83□□□□□ -1.16
PTPRK-205ENST00000368213 IGLV4-3A0A075B6K6 122 aa7.82□□□□□ -1.16
PTPRK-205ENST00000368213 CRIP1P50238 77 aa7.82□□□□□ -1.16
PTPRK-205ENST00000368213 ANKRD39Q53RE8 183 aa7.82□□□□□ -1.16
PTPRK-205ENST00000368213 TNRC6BQ9UPQ9 1833 aaKnown RBP7.82□□□□□ -1.16
PTPRK-205ENST00000368213 FHL3Q13643 280 aa7.82□□□□□ -1.16
PTPRK-205ENST00000368213 LAMA2P24043 3122 aaKnown RBP7.82□□□□□ -1.16
PTPRK-205ENST00000368213 UBE2D3P61077 147 aa7.81□□□□□ -1.16
PTPRK-205ENST00000368213 ODF1Q14990 250 aa7.81□□□□□ -1.16
PTPRK-205ENST00000368213 A0A1W2PPM0 123 aa7.81□□□□□ -1.16
PTPRK-205ENST00000368213 UBE2V1Q13404 147 aa7.81□□□□□ -1.16
PTPRK-205ENST00000368213 NTN5Q8WTR8 489 aaPredicted RBP7.81□□□□□ -1.16
PTPRK-205ENST00000368213 PRRC2CQ9Y520 2896 aaKnown RBP7.81□□□□□ -1.16
PTPRK-205ENST00000368213 IGKV2D-26A0A0A0MRZ7 120 aa7.81□□□□□ -1.16
PTPRK-205ENST00000368213 H3BMG7 143 aa7.81□□□□□ -1.16
PTPRK-205ENST00000368213 IGKV2-28A0A075B6P5 120 aa7.81□□□□□ -1.16
PTPRK-205ENST00000368213 LINC00959A0A1B0GUT2 108 aa7.81□□□□□ -1.16
PTPRK-205ENST00000368213 IGKV2D-28P01615 120 aa7.81□□□□□ -1.16
PTPRK-205ENST00000368213 TDRG1Q3Y452 100 aa7.81□□□□□ -1.16
PTPRK-205ENST00000368213 FOXI1Q12951 378 aa7.8□□□□□ -1.16
PTPRK-205ENST00000368213 TTTY13Q9BZ97 58 aa7.8□□□□□ -1.16
PTPRK-205ENST00000368213 TANC2Q9HCD6 1990 aa7.8□□□□□ -1.16
PTPRK-205ENST00000368213 PLXNB1O43157 2135 aa7.8□□□□□ -1.16
PTPRK-205ENST00000368213 F8W1H4 67 aa7.8□□□□□ -1.16
PTPRK-205ENST00000368213 EML5Q05BV3 1969 aa7.8□□□□□ -1.16
PTPRK-205ENST00000368213 A0A1B0GXF2 115 aa7.79□□□□□ -1.16
PTPRK-205ENST00000368213 IBA57-AS1B1ANH7 110 aa7.79□□□□□ -1.16
PTPRK-205ENST00000368213 PPDPFQ9H3Y8 114 aa7.79□□□□□ -1.16
PTPRK-205ENST00000368213 ETDBQ3ZM63 59 aa7.79□□□□□ -1.16
PTPRK-205ENST00000368213 PLAC8L1A1L4L8 177 aa7.79□□□□□ -1.16
PTPRK-205ENST00000368213 UBE2D2P62837 147 aa7.79□□□□□ -1.16
PTPRK-205ENST00000368213 RBM3P98179 157 aaKnown RBP7.79□□□□□ -1.16
PTPRK-205ENST00000368213 Q8N2B8 174 aa7.79□□□□□ -1.16
PTPRK-205ENST00000368213 TLN2Q9Y4G6 2542 aa7.79□□□□□ -1.16
PTPRK-205ENST00000368213 C1orf158Q8N1D5 194 aa7.79□□□□□ -1.16
PTPRK-205ENST00000368213 COL4A2P08572 1712 aa7.78□□□□□ -1.16
PTPRK-205ENST00000368213 K7EP34 96 aa7.78□□□□□ -1.16
PTPRK-205ENST00000368213 CHD7Q9P2D1 2997 aa7.78□□□□□ -1.16
PTPRK-205ENST00000368213 CHKB-CPT1BH3BT56 60 aa7.78□□□□□ -1.16
PTPRK-205ENST00000368213 C11orf21Q9P2W6 132 aa7.78□□□□□ -1.16
PTPRK-205ENST00000368213 TMEM256-PLSCR3K7ERE1 68 aa7.78□□□□□ -1.16
PTPRK-205ENST00000368213 NUPR1O60356 82 aa7.78□□□□□ -1.16
PTPRK-205ENST00000368213 IGLV2-11P01706 119 aa7.78□□□□□ -1.16
PTPRK-205ENST00000368213 TRBV6-5A0A0K0K1A5 114 aa7.77□□□□□ -1.16
PTPRK-205ENST00000368213 JMJD7-PLA2G4BH0Y9G9 81 aa7.77□□□□□ -1.16
PTPRK-205ENST00000368213 CHCHD7Q9BUK0 85 aa7.77□□□□□ -1.16
PTPRK-205ENST00000368213 A0A0J9YXY3 114 aa7.77□□□□□ -1.17
PTPRK-205ENST00000368213 TRBV27A0A0K0K1C4 114 aa7.77□□□□□ -1.17
PTPRK-205ENST00000368213 TSHBP01222 138 aa7.77□□□□□ -1.17
PTPRK-205ENST00000368213 PIK3CD-AS1Q5SR53 167 aa7.77□□□□□ -1.17
PTPRK-205ENST00000368213 SPANXB1Q9NS25 103 aaPredicted RBP7.77□□□□□ -1.17
PTPRK-205ENST00000368213 C5orf42Q9H799 3197 aa7.77□□□□□ -1.17
PTPRK-205ENST00000368213 DLEU1O43261 78 aa7.76□□□□□ -1.17
PTPRK-205ENST00000368213 ZNF22P17026 224 aaPredicted RBP7.76□□□□□ -1.17
PTPRK-205ENST00000368213 RPL37AP8A6NKH3 93 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms