RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 RPL39P62891 51 aaKnown RBP8.44□□□□□ -1.06
USF1-201ENST00000368019 TMEM95Q3KNT9 176 aa8.44□□□□□ -1.06
USF1-201ENST00000368019 ZFAND6Q6FIF0 208 aa8.44□□□□□ -1.06
USF1-201ENST00000368019 IGHV1OR15-1A0A075B7D0 117 aa8.43□□□□□ -1.06
USF1-201ENST00000368019 TRBV10-2A0A0K0K1G8 114 aa8.43□□□□□ -1.06
USF1-201ENST00000368019 H3BT86 120 aa8.43□□□□□ -1.06
USF1-201ENST00000368019 K7EIL1 84 aa8.43□□□□□ -1.06
USF1-201ENST00000368019 TIMM17BO60830 172 aa8.43□□□□□ -1.06
USF1-201ENST00000368019 PF4V1P10720 104 aa8.43□□□□□ -1.06
USF1-201ENST00000368019 RPL11P62913 178 aaKnown RBP8.43□□□□□ -1.06
USF1-201ENST00000368019 MRPS36P82909 103 aaKnown RBP8.43□□□□□ -1.06
USF1-201ENST00000368019 LINC01620Q4KN68 170 aa8.43□□□□□ -1.06
USF1-201ENST00000368019 IGLV4-3A0A075B6K6 122 aa8.42□□□□□ -1.06
USF1-201ENST00000368019 K7EQG2 157 aa8.42□□□□□ -1.06
USF1-201ENST00000368019 ZNF56Q15929 161 aa8.42□□□□□ -1.06
USF1-201ENST00000368019 TRAV26-1A0A087WT03 109 aa8.41□□□□□ -1.06
USF1-201ENST00000368019 A0A087WWL8 130 aa8.41□□□□□ -1.06
USF1-201ENST00000368019 TRAV12-3A0A0B4J271 114 aa8.41□□□□□ -1.06
USF1-201ENST00000368019 A0A0J9YXY3 114 aa8.41□□□□□ -1.06
USF1-201ENST00000368019 A8MTW9 85 aa8.41□□□□□ -1.06
USF1-201ENST00000368019 C9JAW5 83 aa8.41□□□□□ -1.06
USF1-201ENST00000368019 SPRY2O43597 315 aa8.41□□□□□ -1.06
USF1-201ENST00000368019 IFITM1P13164 125 aa8.41□□□□□ -1.06
USF1-201ENST00000368019 SNRPD3P62318 126 aaKnown RBP8.41□□□□□ -1.06
USF1-201ENST00000368019 IGHV1-58A0A0C4DH39 117 aa8.4□□□□□ -1.06
USF1-201ENST00000368019 FAM240AA0A1B0GVK7 77 aa8.4□□□□□ -1.06
USF1-201ENST00000368019 A0A1W2PRX2 142 aa8.4□□□□□ -1.06
USF1-201ENST00000368019 EIF4EBP3O60516 100 aaPredicted RBP8.4□□□□□ -1.06
USF1-201ENST00000368019 EMP1P54849 157 aa8.4□□□□□ -1.06
USF1-201ENST00000368019 DEFB1P60022 68 aa8.4□□□□□ -1.06
USF1-201ENST00000368019 KRTAP10-11P60412 298 aa8.4□□□□□ -1.06
USF1-201ENST00000368019 MUSTN1Q8IVN3 82 aa8.4□□□□□ -1.06
USF1-201ENST00000368019 PPDPFQ9H3Y8 114 aa8.4□□□□□ -1.06
USF1-201ENST00000368019 JPT2Q9H910 190 aa8.4□□□□□ -1.06
USF1-201ENST00000368019 LINC00527Q9UJ94 153 aa8.4□□□□□ -1.06
USF1-201ENST00000368019 TRAV2A0A0B4J234 112 aa8.39□□□□□ -1.07
USF1-201ENST00000368019 TINCRA0A1B0GVN0 87 aa8.39□□□□□ -1.07
USF1-201ENST00000368019 IGHV3-11P01762 117 aa8.39□□□□□ -1.07
USF1-201ENST00000368019 EGFEM1PQ0D2K5 195 aa8.39□□□□□ -1.07
USF1-201ENST00000368019 DEFB121Q5J5C9 76 aa8.39□□□□□ -1.07
USF1-201ENST00000368019 Q8N1Y9 231 aa8.39□□□□□ -1.07
USF1-201ENST00000368019 LITAFQ99732 161 aa8.39□□□□□ -1.07
USF1-201ENST00000368019 TIMM21Q9BVV7 248 aa8.39□□□□□ -1.07
USF1-201ENST00000368019 COX6CP09669 75 aa8.38□□□□□ -1.07
USF1-201ENST00000368019 IGHV3-30-3P0DP02 117 aa8.38□□□□□ -1.07
USF1-201ENST00000368019 PSMB8P28062 276 aa8.38□□□□□ -1.07
USF1-201ENST00000368019 FAM74A4Q5TZK3 123 aa8.38□□□□□ -1.07
USF1-201ENST00000368019 C10orf99Q6UWK7 81 aa8.38□□□□□ -1.07
USF1-201ENST00000368019 DNAJC30Q96LL9 226 aa8.38□□□□□ -1.07
USF1-201ENST00000368019 LINC00467Q9BRT7 94 aa8.38□□□□□ -1.07
USF1-201ENST00000368019 A0A0J9YXV3 536 aa8.37□□□□□ -1.07
USF1-201ENST00000368019 SNCGO76070 127 aa8.37□□□□□ -1.07
USF1-201ENST00000368019 MIAQ16674 131 aa8.37□□□□□ -1.07
USF1-201ENST00000368019 LINC00482Q8N8I6 264 aa8.37□□□□□ -1.07
USF1-201ENST00000368019 ANAPC13Q9BS18 74 aa8.37□□□□□ -1.07
USF1-201ENST00000368019 RYR3Q15413 4870 aa8.37□□□□□ -1.07
USF1-201ENST00000368019 TRAV8-4A0A0B4J246 113 aa8.36□□□□□ -1.07
USF1-201ENST00000368019 H3BMM0 161 aa8.36□□□□□ -1.07
USF1-201ENST00000368019 PF4P02776 101 aa8.36□□□□□ -1.07
USF1-201ENST00000368019 TIRAPP58753 221 aa8.36□□□□□ -1.07
USF1-201ENST00000368019 GAGE2BQ13066 116 aa8.36□□□□□ -1.07
USF1-201ENST00000368019 GAGE5Q13069 117 aa8.36□□□□□ -1.07
USF1-201ENST00000368019 GAGE6Q13070 117 aa8.36□□□□□ -1.07
USF1-201ENST00000368019 Q1RN00 199 aa8.36□□□□□ -1.07
USF1-201ENST00000368019 GAGE2EQ4V326 116 aa8.36□□□□□ -1.07
USF1-201ENST00000368019 SFTA2Q6UW10 78 aa8.36□□□□□ -1.07
USF1-201ENST00000368019 NTN5Q8WTR8 489 aaPredicted RBP8.36□□□□□ -1.07
USF1-201ENST00000368019 UBE2WQ96B02 151 aa8.36□□□□□ -1.07
USF1-201ENST00000368019 GAGE2DQ9UEU5 116 aa8.36□□□□□ -1.07
USF1-201ENST00000368019 ICOSQ9Y6W8 199 aa8.36□□□□□ -1.07
USF1-201ENST00000368019 IGLV5-45A0A087WSX0 123 aa8.35□□□□□ -1.07
USF1-201ENST00000368019 COPS9Q8WXC6 57 aa8.35□□□□□ -1.07
USF1-201ENST00000368019 VSIG2Q96IQ7 327 aa8.35□□□□□ -1.07
USF1-201ENST00000368019 RAX2Q96IS3 184 aa8.35□□□□□ -1.07
USF1-201ENST00000368019 STAB2Q8WWQ8 2551 aa8.34□□□□□ -1.07
USF1-201ENST00000368019 IGKV3-7A0A075B6H7 116 aa8.34□□□□□ -1.07
USF1-201ENST00000368019 TRIAP1O43715 76 aa8.34□□□□□ -1.07
USF1-201ENST00000368019 HOXD3P31249 432 aaPredicted RBP8.34□□□□□ -1.07
USF1-201ENST00000368019 FAM19A3Q7Z5A8 133 aa8.34□□□□□ -1.07
USF1-201ENST00000368019 FAM104AQ969W3 186 aa8.34□□□□□ -1.07
USF1-201ENST00000368019 CLUHP3Q96NS8 147 aa8.34□□□□□ -1.07
USF1-201ENST00000368019 B9D2Q9BPU9 175 aa8.34□□□□□ -1.07
USF1-201ENST00000368019 NDUFA12Q9UI09 145 aa8.34□□□□□ -1.07
USF1-201ENST00000368019 LST1O00453 97 aa8.33□□□□□ -1.08
USF1-201ENST00000368019 ELANEP08246 267 aa8.33□□□□□ -1.08
USF1-201ENST00000368019 ZNF415Q09FC8 603 aa8.33□□□□□ -1.08
USF1-201ENST00000368019 WWC2-AS2Q96NR7 200 aa8.33□□□□□ -1.08
USF1-201ENST00000368019 OPRPNQ99935 248 aaPredicted RBP8.33□□□□□ -1.08
USF1-201ENST00000368019 NDUFA1O15239 70 aa8.32□□□□□ -1.08
USF1-201ENST00000368019 ACYP1P07311 99 aa8.32□□□□□ -1.08
USF1-201ENST00000368019 NDUFV3P56181 108 aaKnown RBP8.32□□□□□ -1.08
USF1-201ENST00000368019 SPINK13Q1W4C9 94 aa8.32□□□□□ -1.08
USF1-201ENST00000368019 C2orf82Q6UX34 121 aa8.32□□□□□ -1.08
USF1-201ENST00000368019 C18orf65Q6ZTR6 163 aa8.32□□□□□ -1.08
USF1-201ENST00000368019 TMEM61Q8N0U2 210 aa8.32□□□□□ -1.08
USF1-201ENST00000368019 SPXQ9BT56 116 aa8.32□□□□□ -1.08
USF1-201ENST00000368019 CHCHD7Q9BUK0 85 aa8.32□□□□□ -1.08
USF1-201ENST00000368019 UBE2D4Q9Y2X8 147 aa8.32□□□□□ -1.08
USF1-201ENST00000368019 TNFRSF18Q9Y5U5 241 aa8.32□□□□□ -1.08
USF1-201ENST00000368019 NHLRC4P0CG21 123 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms