RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 IGHV3-30-3P0DP02 117 aa4.02□□□□□ -1.77
CDC42BPA-204ENST00000366767 PSCAO43653 123 aa4.02□□□□□ -1.77
CDC42BPA-204ENST00000366767 LINC01548A6NM66 108 aa4.02□□□□□ -1.77
CDC42BPA-204ENST00000366767 IGLV1-40P01703 118 aa4.02□□□□□ -1.77
CDC42BPA-204ENST00000366767 C5orf38Q86SI9 138 aa4.02□□□□□ -1.77
CDC42BPA-204ENST00000366767 TRBV27A0A0K0K1C4 114 aa4.02□□□□□ -1.77
CDC42BPA-204ENST00000366767 SCXQ7RTU7 201 aa4.02□□□□□ -1.77
CDC42BPA-204ENST00000366767 Q6JHZ5 121 aa4.02□□□□□ -1.77
CDC42BPA-204ENST00000366767 MIR7-3HGQ8N6C7 128 aa4.02□□□□□ -1.77
CDC42BPA-204ENST00000366767 IGHV3-33P01772 117 aa4.01□□□□□ -1.77
CDC42BPA-204ENST00000366767 ANGP03950 147 aaKnown RBP4.01□□□□□ -1.77
CDC42BPA-204ENST00000366767 C4orf3Q8WVX3 66 aa4.01□□□□□ -1.77
CDC42BPA-204ENST00000366767 Q96MF0 132 aa4.01□□□□□ -1.77
CDC42BPA-204ENST00000366767 ETDCA0A1B0GVM5 59 aa4.01□□□□□ -1.77
CDC42BPA-204ENST00000366767 DIRC1Q969H9 104 aa4.01□□□□□ -1.77
CDC42BPA-204ENST00000366767 A0A0J9YY99 117 aa4.01□□□□□ -1.77
CDC42BPA-204ENST00000366767 KLLNB2CW77 178 aa4.01□□□□□ -1.77
CDC42BPA-204ENST00000366767 Q6YL49 198 aa4.01□□□□□ -1.77
CDC42BPA-204ENST00000366767 PYGO1Q9Y3Y4 419 aa4.01□□□□□ -1.77
CDC42BPA-204ENST00000366767 C11orf44Q8N8P7 122 aa4.01□□□□□ -1.77
CDC42BPA-204ENST00000366767 TRBV10-1A0A0K0K1A3 114 aa4.01□□□□□ -1.77
CDC42BPA-204ENST00000366767 TMEM223A0PJW6 202 aa4.01□□□□□ -1.77
CDC42BPA-204ENST00000366767 IGHV3-30P01768 117 aa4□□□□□ -1.77
CDC42BPA-204ENST00000366767 IGHV3-30-5P0DP03 117 aa4□□□□□ -1.77
CDC42BPA-204ENST00000366767 SOSTDC1Q6X4U4 206 aa4□□□□□ -1.77
CDC42BPA-204ENST00000366767 C19orf84I3L1E1 186 aa4□□□□□ -1.77
CDC42BPA-204ENST00000366767 K7EQD1 137 aa4□□□□□ -1.77
CDC42BPA-204ENST00000366767 POLR2KP53803 58 aaKnown RBP4□□□□□ -1.77
CDC42BPA-204ENST00000366767 C11orf21Q9P2W6 132 aa4□□□□□ -1.77
CDC42BPA-204ENST00000366767 HHLA3Q9XRX5 114 aa4□□□□□ -1.77
CDC42BPA-204ENST00000366767 KLK5Q9Y337 293 aaPredicted RBP4□□□□□ -1.77
CDC42BPA-204ENST00000366767 H7C423 109 aa4□□□□□ -1.77
CDC42BPA-204ENST00000366767 A0A096LPF7 62 aa4□□□□□ -1.77
CDC42BPA-204ENST00000366767 SLPIP03973 132 aa4□□□□□ -1.77
CDC42BPA-204ENST00000366767 RNASE3P12724 160 aaKnown RBP4□□□□□ -1.77
CDC42BPA-204ENST00000366767 MIFP14174 115 aa4□□□□□ -1.77
CDC42BPA-204ENST00000366767 TIRAPP58753 221 aa4□□□□□ -1.77
CDC42BPA-204ENST00000366767 A0A096LNJ9 63 aa3.99□□□□□ -1.77
CDC42BPA-204ENST00000366767 C16orf74Q96GX8 76 aa3.99□□□□□ -1.77
CDC42BPA-204ENST00000366767 IGLV2-18A0A075B6J9 118 aa3.99□□□□□ -1.77
CDC42BPA-204ENST00000366767 VPREB1P12018 145 aa3.99□□□□□ -1.77
CDC42BPA-204ENST00000366767 C9orf85Q96MD7 179 aa3.99□□□□□ -1.77
CDC42BPA-204ENST00000366767 CCL24O00175 119 aa3.99□□□□□ -1.77
CDC42BPA-204ENST00000366767 LST1O00453 97 aa3.99□□□□□ -1.77
CDC42BPA-204ENST00000366767 APRG1Q8IVJ8 170 aa3.99□□□□□ -1.77
CDC42BPA-204ENST00000366767 TRAV7A0A075B6U4 112 aa3.99□□□□□ -1.77
CDC42BPA-204ENST00000366767 COX7BP24311 80 aa3.99□□□□□ -1.77
CDC42BPA-204ENST00000366767 Q6ZQT7 251 aa3.99□□□□□ -1.77
CDC42BPA-204ENST00000366767 TMEM263Q8WUH6 116 aaKnown RBP3.99□□□□□ -1.77
CDC42BPA-204ENST00000366767 TRBV7-3A0A075B6L6 115 aa3.98□□□□□ -1.77
CDC42BPA-204ENST00000366767 FAM19A3Q7Z5A8 133 aa3.98□□□□□ -1.77
CDC42BPA-204ENST00000366767 HTTP42858 3142 aa3.98□□□□□ -1.77
CDC42BPA-204ENST00000366767 M0QY20 66 aa3.98□□□□□ -1.77
CDC42BPA-204ENST00000366767 IGKV4-1P06312 121 aa3.98□□□□□ -1.77
CDC42BPA-204ENST00000366767 SLURP1P55000 103 aa3.98□□□□□ -1.77
CDC42BPA-204ENST00000366767 C5orf42Q9H799 3197 aa3.98□□□□□ -1.77
CDC42BPA-204ENST00000366767 GPR179Q6PRD1 2367 aa3.98□□□□□ -1.77
CDC42BPA-204ENST00000366767 DCANP1Q8TF63 244 aa3.98□□□□□ -1.77
CDC42BPA-204ENST00000366767 H0Y9J4 135 aa3.98□□□□□ -1.77
CDC42BPA-204ENST00000366767 MAP6D1Q9H9H5 199 aa3.98□□□□□ -1.77
CDC42BPA-204ENST00000366767 K7ERS5 55 aa3.97□□□□□ -1.77
CDC42BPA-204ENST00000366767 NOP10Q9NPE3 64 aaKnown RBP3.97□□□□□ -1.77
CDC42BPA-204ENST00000366767 SONP18583 2426 aaKnown RBP3.97□□□□□ -1.77
CDC42BPA-204ENST00000366767 LINC00308Q8TCZ7 52 aa3.97□□□□□ -1.77
CDC42BPA-204ENST00000366767 CDSNQ15517 529 aa3.97□□□□□ -1.77
CDC42BPA-204ENST00000366767 PRR9Q5T870 116 aa3.97□□□□□ -1.77
CDC42BPA-204ENST00000366767 IGLV4-3A0A075B6K6 122 aa3.97□□□□□ -1.77
CDC42BPA-204ENST00000366767 IGHV4-31P0DP07 118 aa3.97□□□□□ -1.77
CDC42BPA-204ENST00000366767 CAMK2N2Q96S95 79 aa3.97□□□□□ -1.77
CDC42BPA-204ENST00000366767 CCDC168Q8NDH2 2452 aa3.97□□□□□ -1.77
CDC42BPA-204ENST00000366767 IGIPA6NJ69 53 aa3.97□□□□□ -1.77
CDC42BPA-204ENST00000366767 LRCOL1A6NCL2 159 aa3.97□□□□□ -1.77
CDC42BPA-204ENST00000366767 C4orf26Q17RF5 130 aa3.97□□□□□ -1.77
CDC42BPA-204ENST00000366767 FAM208BQ5VWN6 2430 aa3.96□□□□□ -1.77
CDC42BPA-204ENST00000366767 COL27A1Q8IZC6 1860 aaPredicted RBP3.96□□□□□ -1.77
CDC42BPA-204ENST00000366767 ZNF22P17026 224 aaPredicted RBP3.96□□□□□ -1.77
CDC42BPA-204ENST00000366767 RMI2Q96E14 147 aa3.96□□□□□ -1.77
CDC42BPA-204ENST00000366767 CRYGDP07320 174 aa3.96□□□□□ -1.78
CDC42BPA-204ENST00000366767 FAM30AQ9NZY2 134 aa3.96□□□□□ -1.78
CDC42BPA-204ENST00000366767 APOC4P55056 127 aa3.96□□□□□ -1.78
CDC42BPA-204ENST00000366767 FAM19A4Q96LR4 140 aa3.96□□□□□ -1.78
CDC42BPA-204ENST00000366767 NDUFA1O15239 70 aa3.96□□□□□ -1.78
CDC42BPA-204ENST00000366767 ZNF702PQ9H963 129 aa3.96□□□□□ -1.78
CDC42BPA-204ENST00000366767 DEFB1P60022 68 aa3.96□□□□□ -1.78
CDC42BPA-204ENST00000366767 PRR4Q16378 134 aa3.96□□□□□ -1.78
CDC42BPA-204ENST00000366767 CEMP1Q6PRD7 247 aaPredicted RBP3.96□□□□□ -1.78
CDC42BPA-204ENST00000366767 LINC00467Q9BRT7 94 aa3.96□□□□□ -1.78
CDC42BPA-204ENST00000366767 MAPK1IP1LQ8NDC0 245 aa3.96□□□□□ -1.78
CDC42BPA-204ENST00000366767 DEFB114Q30KQ6 69 aa3.95□□□□□ -1.78
CDC42BPA-204ENST00000366767 DOPEY1Q5JWR5 2465 aa3.95□□□□□ -1.78
CDC42BPA-204ENST00000366767 CDIP1Q9H305 208 aa3.95□□□□□ -1.78
CDC42BPA-204ENST00000366767 CEP350Q5VT06 3117 aa3.95□□□□□ -1.78
CDC42BPA-204ENST00000366767 PRYO14603 147 aa3.95□□□□□ -1.78
CDC42BPA-204ENST00000366767 CCKP06307 115 aa3.95□□□□□ -1.78
CDC42BPA-204ENST00000366767 WFDC10BQ8IUB3 73 aa3.95□□□□□ -1.78
CDC42BPA-204ENST00000366767 IGLV10-54A0A075B6I4 117 aa3.95□□□□□ -1.78
CDC42BPA-204ENST00000366767 IGKV2D-24A0A075B6R9 120 aa3.95□□□□□ -1.78
CDC42BPA-204ENST00000366767 TRBV7-6A0A0J9YX20 115 aa3.95□□□□□ -1.78
CDC42BPA-204ENST00000366767 PSPHP1O15172 72 aa3.95□□□□□ -1.78
CDC42BPA-204ENST00000366767 TSHBP01222 138 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms