RNA–Protein interactions for RNA: ENST00000366516.5

SMYD3-201, Transcript of SET and MYND domain containing 3, humanhuman

TSL 1 (best)

Gene SMYD3, Length 1,863 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMYD3-201ENST00000366516 CEMP1Q6PRD7 247 aaPredicted RBP6.61□□□□□ -1.35
SMYD3-201ENST00000366516 PRRC2AP48634 2157 aaKnown RBP6.61□□□□□ -1.35
SMYD3-201ENST00000366516 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.6□□□□□ -1.35
SMYD3-201ENST00000366516 IGKV2-29A2NJV5 120 aaPredicted RBP6.6□□□□□ -1.35
SMYD3-201ENST00000366516 BAALC-AS2P0C853 105 aa6.6□□□□□ -1.35
SMYD3-201ENST00000366516 HIST2H2BCQ6DN03 193 aa6.6□□□□□ -1.35
SMYD3-201ENST00000366516 HIST2H2BDQ6DRA6 164 aa6.6□□□□□ -1.35
SMYD3-201ENST00000366516 C5orf38Q86SI9 138 aa6.6□□□□□ -1.35
SMYD3-201ENST00000366516 LRRC75A-AS1Q8N1F1 130 aa6.6□□□□□ -1.35
SMYD3-201ENST00000366516 PTPRQQ9UMZ3 2332 aa6.6□□□□□ -1.35
SMYD3-201ENST00000366516 A0A1W2PPR1 153 aa6.6□□□□□ -1.35
SMYD3-201ENST00000366516 J3KT08 172 aa6.6□□□□□ -1.35
SMYD3-201ENST00000366516 DNAL4O96015 105 aa6.6□□□□□ -1.35
SMYD3-201ENST00000366516 COX7CP15954 63 aa6.6□□□□□ -1.35
SMYD3-201ENST00000366516 RNASE13Q5GAN3 156 aaKnown RBP6.6□□□□□ -1.35
SMYD3-201ENST00000366516 Q6ZSV7 163 aa6.6□□□□□ -1.35
SMYD3-201ENST00000366516 PRIMA1Q86XR5 153 aa6.6□□□□□ -1.35
SMYD3-201ENST00000366516 DUX5Q96PT3 197 aa6.6□□□□□ -1.35
SMYD3-201ENST00000366516 VPREB3Q9UKI3 123 aa6.6□□□□□ -1.35
SMYD3-201ENST00000366516 COL6A6A6NMZ7 2263 aa6.59□□□□□ -1.35
SMYD3-201ENST00000366516 IGHV3-73A0A0B4J1V6 119 aa6.59□□□□□ -1.35
SMYD3-201ENST00000366516 CRPP02741 224 aa6.59□□□□□ -1.35
SMYD3-201ENST00000366516 IGHV4-38-2P0DP08 117 aa6.59□□□□□ -1.35
SMYD3-201ENST00000366516 NRGNQ92686 78 aa6.59□□□□□ -1.35
SMYD3-201ENST00000366516 CRYGAP11844 174 aa6.58□□□□□ -1.36
SMYD3-201ENST00000366516 RPL28P46779 137 aaKnown RBP6.58□□□□□ -1.36
SMYD3-201ENST00000366516 BEAN1Q3B7T3 259 aa6.58□□□□□ -1.36
SMYD3-201ENST00000366516 TRBV10-1A0A0K0K1A3 114 aa6.58□□□□□ -1.36
SMYD3-201ENST00000366516 A8MZ25 164 aa6.58□□□□□ -1.36
SMYD3-201ENST00000366516 SMIM1B2RUZ4 78 aa6.58□□□□□ -1.36
SMYD3-201ENST00000366516 RS1O15537 224 aa6.58□□□□□ -1.36
SMYD3-201ENST00000366516 MSMBP08118 114 aa6.58□□□□□ -1.36
SMYD3-201ENST00000366516 EDN2P20800 178 aa6.58□□□□□ -1.36
SMYD3-201ENST00000366516 MALP21145 153 aa6.58□□□□□ -1.36
SMYD3-201ENST00000366516 TNP2Q05952 138 aa6.58□□□□□ -1.36
SMYD3-201ENST00000366516 TACC2O95359 2948 aa6.57□□□□□ -1.36
SMYD3-201ENST00000366516 H0YGX0 51 aa6.57□□□□□ -1.36
SMYD3-201ENST00000366516 INSP01308 110 aa6.57□□□□□ -1.36
SMYD3-201ENST00000366516 HTN1P15515 57 aa6.57□□□□□ -1.36
SMYD3-201ENST00000366516 SYNJ2BPP57105 145 aa6.57□□□□□ -1.36
SMYD3-201ENST00000366516 HIST1H4AP62805 103 aaKnown RBP6.57□□□□□ -1.36
SMYD3-201ENST00000366516 RPS28P62857 69 aaKnown RBP6.57□□□□□ -1.36
SMYD3-201ENST00000366516 LINC00242Q5T6M2 205 aa6.57□□□□□ -1.36
SMYD3-201ENST00000366516 C10orf105Q8TEF2 133 aa6.57□□□□□ -1.36
SMYD3-201ENST00000366516 SMCR5Q8TEV8 140 aa6.57□□□□□ -1.36
SMYD3-201ENST00000366516 ZNF625Q96I27 306 aaPredicted RBP6.57□□□□□ -1.36
SMYD3-201ENST00000366516 USP9XQ93008 2570 aaPredicted RBP6.56□□□□□ -1.36
SMYD3-201ENST00000366516 IGHV4-61A0A0C4DH41 118 aa6.56□□□□□ -1.36
SMYD3-201ENST00000366516 RPL36AP83881 106 aaKnown RBP6.56□□□□□ -1.36
SMYD3-201ENST00000366516 GAGE2AQ6NT46 116 aa6.56□□□□□ -1.36
SMYD3-201ENST00000366516 RPL36ALQ969Q0 106 aaKnown RBP6.56□□□□□ -1.36
SMYD3-201ENST00000366516 UBE2E2Q96LR5 201 aa6.56□□□□□ -1.36
SMYD3-201ENST00000366516 IGHV3OR16-12A0A075B7B8 117 aa6.56□□□□□ -1.36
SMYD3-201ENST00000366516 RBMY1A1P0DJD3 496 aaKnown RBP6.56□□□□□ -1.36
SMYD3-201ENST00000366516 RBMY1CP0DJD4 496 aa6.56□□□□□ -1.36
SMYD3-201ENST00000366516 HOXD3P31249 432 aaPredicted RBP6.56□□□□□ -1.36
SMYD3-201ENST00000366516 PROK1P58294 105 aa6.56□□□□□ -1.36
SMYD3-201ENST00000366516 RBMY1FQ15415 496 aaKnown RBP6.56□□□□□ -1.36
SMYD3-201ENST00000366516 TEX15Q9BXT5 2789 aa6.55□□□□□ -1.36
SMYD3-201ENST00000366516 PTPN13Q12923 2485 aa6.55□□□□□ -1.36
SMYD3-201ENST00000366516 KNCNA6PVL3 124 aa6.55□□□□□ -1.36
SMYD3-201ENST00000366516 B4DSR2 109 aa6.55□□□□□ -1.36
SMYD3-201ENST00000366516 DEFB131AP59861 70 aa6.55□□□□□ -1.36
SMYD3-201ENST00000366516 S100A7L2Q5SY68 101 aa6.55□□□□□ -1.36
SMYD3-201ENST00000366516 Q6JHZ5 121 aa6.55□□□□□ -1.36
SMYD3-201ENST00000366516 LINC00694P0DN24 101 aa6.54□□□□□ -1.36
SMYD3-201ENST00000366516 TMEM258P61165 79 aa6.54□□□□□ -1.36
SMYD3-201ENST00000366516 RPL18AQ02543 176 aaKnown RBP6.54□□□□□ -1.36
SMYD3-201ENST00000366516 C11orf72Q8NBR9 251 aa6.54□□□□□ -1.36
SMYD3-201ENST00000366516 OR13C6PQ8NH95 151 aa6.54□□□□□ -1.36
SMYD3-201ENST00000366516 CCL19Q99731 98 aa6.54□□□□□ -1.36
SMYD3-201ENST00000366516 IGHV3-38A0A0C4DH36 116 aa6.53□□□□□ -1.36
SMYD3-201ENST00000366516 UBE2L6O14933 153 aa6.53□□□□□ -1.36
SMYD3-201ENST00000366516 DSCR9P59020 149 aa6.53□□□□□ -1.36
SMYD3-201ENST00000366516 COX6A2Q02221 97 aa6.53□□□□□ -1.36
SMYD3-201ENST00000366516 C5orf47Q569G3 176 aa6.53□□□□□ -1.36
SMYD3-201ENST00000366516 LCE2CQ5TA81 110 aa6.53□□□□□ -1.36
SMYD3-201ENST00000366516 SOSTDC1Q6X4U4 206 aa6.53□□□□□ -1.36
SMYD3-201ENST00000366516 ATP5EP2Q5VTU8 51 aa6.53□□□□□ -1.36
SMYD3-201ENST00000366516 Q6ZSN1 163 aa6.53□□□□□ -1.36
SMYD3-201ENST00000366516 Q8N2B8 174 aa6.53□□□□□ -1.36
SMYD3-201ENST00000366516 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.53□□□□□ -1.36
SMYD3-201ENST00000366516 UBR5O95071 2799 aaPredicted RBP6.53□□□□□ -1.36
SMYD3-201ENST00000366516 RBMY1BA6NDE4 496 aaKnown RBP6.52□□□□□ -1.37
SMYD3-201ENST00000366516 RBMY1EA6NEQ0 496 aaKnown RBP6.52□□□□□ -1.37
SMYD3-201ENST00000366516 F5H768 121 aa6.52□□□□□ -1.37
SMYD3-201ENST00000366516 J3QLI3 93 aa6.52□□□□□ -1.37
SMYD3-201ENST00000366516 K7EQD1 137 aa6.52□□□□□ -1.37
SMYD3-201ENST00000366516 RBMY1DP0C7P1 496 aaKnown RBP6.52□□□□□ -1.37
SMYD3-201ENST00000366516 TRAV13-1A0A0B4J241 112 aa6.51□□□□□ -1.37
SMYD3-201ENST00000366516 SERP2Q8N6R1 65 aa6.51□□□□□ -1.37
SMYD3-201ENST00000366516 OBSCN-AS1Q96MR7 158 aa6.51□□□□□ -1.37
SMYD3-201ENST00000366516 SND1-IT1Q9HBX3 110 aa6.51□□□□□ -1.37
SMYD3-201ENST00000366516 CDC42SE2Q9NRR3 84 aa6.51□□□□□ -1.37
SMYD3-201ENST00000366516 CSMD1Q96PZ7 3565 aa6.51□□□□□ -1.37
SMYD3-201ENST00000366516 A0A0U1RRA0 63 aa6.51□□□□□ -1.37
SMYD3-201ENST00000366516 LCE2AQ5TA79 106 aaPredicted RBP6.51□□□□□ -1.37
SMYD3-201ENST00000366516 COX7B2Q8TF08 81 aa6.51□□□□□ -1.37
SMYD3-201ENST00000366516 C2orf48Q96LS8 159 aa6.51□□□□□ -1.37
SMYD3-201ENST00000366516 FAM218AQ96MZ4 157 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms