RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 TRBV6-5A0A0K0K1A5 114 aa14.42□□□□□ -0.1
TRIM58-201ENST00000366481 NXPH4O95158 308 aa14.42□□□□□ -0.1
TRIM58-201ENST00000366481 DEFB136Q30KP8 78 aa14.42□□□□□ -0.1
TRIM58-201ENST00000366481 DGAT2L7PQ6IED9 249 aa14.41□□□□□ -0.1
TRIM58-201ENST00000366481 TMEM61Q8N0U2 210 aa14.41□□□□□ -0.1
TRIM58-201ENST00000366481 POM121L12Q8N7R1 296 aa14.41□□□□□ -0.1
TRIM58-201ENST00000366481 FAM19A4Q96LR4 140 aa14.41□□□□□ -0.1
TRIM58-201ENST00000366481 EDA2RQ9HAV5 297 aa14.41□□□□□ -0.1
TRIM58-201ENST00000366481 KLK5Q9Y337 293 aaPredicted RBP14.41□□□□□ -0.1
TRIM58-201ENST00000366481 LOC107984640A0A0U1RRK4 108 aa14.41□□□□□ -0.1
TRIM58-201ENST00000366481 PROK1P58294 105 aa14.41□□□□□ -0.1
TRIM58-201ENST00000366481 CIRBPQ14011 172 aaKnown RBP14.41□□□□□ -0.1
TRIM58-201ENST00000366481 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.4□□□□□ -0.1
TRIM58-201ENST00000366481 IGHV3-16A0A0C4DH30 117 aa14.4□□□□□ -0.1
TRIM58-201ENST00000366481 IGKV2-29A2NJV5 120 aaPredicted RBP14.4□□□□□ -0.1
TRIM58-201ENST00000366481 KLLNB2CW77 178 aa14.4□□□□□ -0.1
TRIM58-201ENST00000366481 IGLV1-40P01703 118 aa14.4□□□□□ -0.1
TRIM58-201ENST00000366481 IGHV3-38A0A0C4DH36 116 aa14.4□□□□□ -0.1
TRIM58-201ENST00000366481 A0A0J9YX75 114 aa14.39□□□□□ -0.11
TRIM58-201ENST00000366481 LINC01587Q99440 93 aa14.39□□□□□ -0.11
TRIM58-201ENST00000366481 LITAFQ99732 161 aa14.39□□□□□ -0.11
TRIM58-201ENST00000366481 GAGE2AQ6NT46 116 aa14.39□□□□□ -0.11
TRIM58-201ENST00000366481 APCP25054 2843 aa14.39□□□□□ -0.11
TRIM58-201ENST00000366481 C18orf65Q6ZTR6 163 aa14.38□□□□□ -0.11
TRIM58-201ENST00000366481 NBPF19A0A087WUL8 3843 aa14.38□□□□□ -0.11
TRIM58-201ENST00000366481 IGHV1OR15-1A0A075B7D0 117 aa14.38□□□□□ -0.11
TRIM58-201ENST00000366481 FAM240AA0A1B0GVK7 77 aa14.38□□□□□ -0.11
TRIM58-201ENST00000366481 VSIG2Q96IQ7 327 aa14.37□□□□□ -0.11
TRIM58-201ENST00000366481 KRTAP10-9P60411 292 aa14.37□□□□□ -0.11
TRIM58-201ENST00000366481 Q9UF83 564 aa14.37□□□□□ -0.11
TRIM58-201ENST00000366481 KHDC1LQ5JSQ8 128 aa14.36□□□□□ -0.11
TRIM58-201ENST00000366481 TRBV7-7A0A0K0K1E9 115 aa14.36□□□□□ -0.11
TRIM58-201ENST00000366481 HERVK_113P63121 156 aa14.36□□□□□ -0.11
TRIM58-201ENST00000366481 ZNF469Q96JG9 3925 aaPredicted RBP14.35□□□□□ -0.11
TRIM58-201ENST00000366481 SNRPD3P62318 126 aaKnown RBP14.35□□□□□ -0.11
TRIM58-201ENST00000366481 SPANXDQ9BXN6 97 aa14.35□□□□□ -0.11
TRIM58-201ENST00000366481 SPANXCQ9NY87 97 aa14.35□□□□□ -0.11
TRIM58-201ENST00000366481 B4DSR2 109 aa14.35□□□□□ -0.11
TRIM58-201ENST00000366481 NDUFA7O95182 113 aa14.35□□□□□ -0.11
TRIM58-201ENST00000366481 DAZ2Q13117 558 aaKnown RBP14.35□□□□□ -0.11
TRIM58-201ENST00000366481 DAZ4Q86SG3 579 aaKnown RBP14.35□□□□□ -0.11
TRIM58-201ENST00000366481 C3orf22Q8N5N4 141 aa14.35□□□□□ -0.11
TRIM58-201ENST00000366481 DAZ3Q9NR90 486 aaKnown RBP14.35□□□□□ -0.11
TRIM58-201ENST00000366481 BAALC-AS2P0C853 105 aa14.34□□□□□ -0.11
TRIM58-201ENST00000366481 PSMB8P28062 276 aa14.34□□□□□ -0.11
TRIM58-201ENST00000366481 APRG1Q8IVJ8 170 aa14.34□□□□□ -0.11
TRIM58-201ENST00000366481 FLNBO75369 2602 aaKnown RBP14.34□□□□□ -0.11
TRIM58-201ENST00000366481 MRPS36P82909 103 aaKnown RBP14.34□□□□□ -0.11
TRIM58-201ENST00000366481 CDKN2A-AS1Q9UH64 79 aa14.34□□□□□ -0.11
TRIM58-201ENST00000366481 C11orf44Q8N8P7 122 aa14.33□□□□□ -0.12
TRIM58-201ENST00000366481 Q9H8V8 135 aa14.33□□□□□ -0.12
TRIM58-201ENST00000366481 ACYP1P07311 99 aa14.33□□□□□ -0.12
TRIM58-201ENST00000366481 CFHR3Q02985 330 aa14.33□□□□□ -0.12
TRIM58-201ENST00000366481 C9orf85Q96MD7 179 aa14.33□□□□□ -0.12
TRIM58-201ENST00000366481 HOXD3P31249 432 aaPredicted RBP14.32□□□□□ -0.12
TRIM58-201ENST00000366481 LINC00643Q86TS7 51 aa14.32□□□□□ -0.12
TRIM58-201ENST00000366481 H3BUA1 57 aa14.32□□□□□ -0.12
TRIM58-201ENST00000366481 SMCR5Q8TEV8 140 aa14.32□□□□□ -0.12
TRIM58-201ENST00000366481 UQCRQO14949 82 aa14.31□□□□□ -0.12
TRIM58-201ENST00000366481 TRAV13-1A0A0B4J241 112 aa14.3□□□□□ -0.12
TRIM58-201ENST00000366481 SLURP1P55000 103 aa14.3□□□□□ -0.12
TRIM58-201ENST00000366481 Q9HAA7 133 aa14.3□□□□□ -0.12
TRIM58-201ENST00000366481 RBMY1A1P0DJD3 496 aaKnown RBP14.3□□□□□ -0.12
TRIM58-201ENST00000366481 RBMY1CP0DJD4 496 aa14.3□□□□□ -0.12
TRIM58-201ENST00000366481 RBMY1FQ15415 496 aaKnown RBP14.3□□□□□ -0.12
TRIM58-201ENST00000366481 DEFB131AP59861 70 aa14.28□□□□□ -0.12
TRIM58-201ENST00000366481 CITED2Q99967 270 aaPredicted RBP14.28□□□□□ -0.12
TRIM58-201ENST00000366481 TINCRA0A1B0GVN0 87 aa14.28□□□□□ -0.12
TRIM58-201ENST00000366481 COX7A2LO14548 114 aa14.28□□□□□ -0.12
TRIM58-201ENST00000366481 PRIMA1Q86XR5 153 aa14.28□□□□□ -0.12
TRIM58-201ENST00000366481 LINC00308Q8TCZ7 52 aa14.28□□□□□ -0.12
TRIM58-201ENST00000366481 IMUPQ9GZP8 106 aa14.27□□□□□ -0.12
TRIM58-201ENST00000366481 K7EQG2 157 aa14.27□□□□□ -0.13
TRIM58-201ENST00000366481 Q8N2B8 174 aa14.27□□□□□ -0.13
TRIM58-201ENST00000366481 DNAJC30Q96LL9 226 aa14.27□□□□□ -0.13
TRIM58-201ENST00000366481 AKAP9Q99996 3911 aa14.27□□□□□ -0.13
TRIM58-201ENST00000366481 LINC00467Q9BRT7 94 aa14.26□□□□□ -0.13
TRIM58-201ENST00000366481 GCN1Q92616 2671 aaKnown RBP14.26□□□□□ -0.13
TRIM58-201ENST00000366481 K7EMT4 169 aa14.26□□□□□ -0.13
TRIM58-201ENST00000366481 PYGO1Q9Y3Y4 419 aa14.26□□□□□ -0.13
TRIM58-201ENST00000366481 hADV29S1A0JD25 119 aa14.26□□□□□ -0.13
TRIM58-201ENST00000366481 DEFB121Q5J5C9 76 aa14.26□□□□□ -0.13
TRIM58-201ENST00000366481 LINC01600Q96MT4 127 aa14.26□□□□□ -0.13
TRIM58-201ENST00000366481 CSDC2Q9Y534 153 aaKnown RBP14.26□□□□□ -0.13
TRIM58-201ENST00000366481 TENM4Q6N022 2769 aa14.26□□□□□ -0.13
TRIM58-201ENST00000366481 IGKV3D-7A0A0C4DH55 119 aa14.25□□□□□ -0.13
TRIM58-201ENST00000366481 TIRAPP58753 221 aa14.25□□□□□ -0.13
TRIM58-201ENST00000366481 SDIM1Q6ZPB5 146 aa14.25□□□□□ -0.13
TRIM58-201ENST00000366481 DNAL4O96015 105 aa14.24□□□□□ -0.13
TRIM58-201ENST00000366481 J3KT08 172 aa14.24□□□□□ -0.13
TRIM58-201ENST00000366481 IGHV3OR16-12A0A075B7B8 117 aa14.23□□□□□ -0.13
TRIM58-201ENST00000366481 LINC00526Q96FQ7 95 aa14.22□□□□□ -0.13
TRIM58-201ENST00000366481 UBE2D4Q9Y2X8 147 aa14.22□□□□□ -0.13
TRIM58-201ENST00000366481 FAM19A5Q7Z5A7 132 aaPredicted RBP14.22□□□□□ -0.13
TRIM58-201ENST00000366481 PIK3CD-AS1Q5SR53 167 aa14.21□□□□□ -0.13
TRIM58-201ENST00000366481 Q6ZSN1 163 aa14.21□□□□□ -0.13
TRIM58-201ENST00000366481 LINC01356Q8N9X3 169 aa14.21□□□□□ -0.13
TRIM58-201ENST00000366481 NDUFA1O15239 70 aa14.2□□□□□ -0.14
TRIM58-201ENST00000366481 INAFM2P0DMQ5 153 aa14.2□□□□□ -0.14
TRIM58-201ENST00000366481 COX7CP15954 63 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms