RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 TMEM243Q9BU79 118 aa6.86□□□□□ -1.31
CALD1-202ENST00000361901 PRO0628Q9UI54 55 aa6.86□□□□□ -1.31
CALD1-202ENST00000361901 F8WDY8 70 aa6.85□□□□□ -1.31
CALD1-202ENST00000361901 PRM2P04554 102 aa6.85□□□□□ -1.31
CALD1-202ENST00000361901 ACYP1P07311 99 aa6.85□□□□□ -1.31
CALD1-202ENST00000361901 C2orf66Q6UXQ4 117 aa6.85□□□□□ -1.31
CALD1-202ENST00000361901 MXRA5Q9NR99 2828 aa6.85□□□□□ -1.31
CALD1-202ENST00000361901 K7EMT4 169 aa6.85□□□□□ -1.31
CALD1-202ENST00000361901 PRR9Q5T870 116 aa6.85□□□□□ -1.31
CALD1-202ENST00000361901 CIRBPQ14011 172 aaKnown RBP6.85□□□□□ -1.31
CALD1-202ENST00000361901 RHOHQ15669 191 aa6.85□□□□□ -1.31
CALD1-202ENST00000361901 C9orf47Q6ZRZ4 202 aa6.85□□□□□ -1.31
CALD1-202ENST00000361901 ESM1Q9NQ30 184 aa6.85□□□□□ -1.31
CALD1-202ENST00000361901 C11orf21Q9P2W6 132 aa6.85□□□□□ -1.31
CALD1-202ENST00000361901 IGHV3-16A0A0C4DH30 117 aa6.84□□□□□ -1.31
CALD1-202ENST00000361901 LINC01006Q8NI28 216 aa6.84□□□□□ -1.31
CALD1-202ENST00000361901 CLEC2BQ92478 149 aa6.84□□□□□ -1.31
CALD1-202ENST00000361901 UBE2D1P51668 147 aa6.84□□□□□ -1.31
CALD1-202ENST00000361901 A0A096LNT2 108 aa6.84□□□□□ -1.31
CALD1-202ENST00000361901 H3BT86 120 aa6.84□□□□□ -1.31
CALD1-202ENST00000361901 MALP21145 153 aa6.83□□□□□ -1.32
CALD1-202ENST00000361901 CFHR3Q02985 330 aa6.83□□□□□ -1.32
CALD1-202ENST00000361901 S100A7L2Q5SY68 101 aa6.83□□□□□ -1.32
CALD1-202ENST00000361901 J3QQQ9 107 aa6.83□□□□□ -1.32
CALD1-202ENST00000361901 RBM3P98179 157 aaKnown RBP6.83□□□□□ -1.32
CALD1-202ENST00000361901 MUSTN1Q8IVN3 82 aa6.83□□□□□ -1.32
CALD1-202ENST00000361901 IMUPQ9GZP8 106 aa6.83□□□□□ -1.32
CALD1-202ENST00000361901 IGHV1OR15-1A0A075B7D0 117 aa6.83□□□□□ -1.32
CALD1-202ENST00000361901 RPS28P62857 69 aaKnown RBP6.83□□□□□ -1.32
CALD1-202ENST00000361901 DGAT2L7PQ6IED9 249 aa6.83□□□□□ -1.32
CALD1-202ENST00000361901 DPH3P1Q9H4G8 78 aa6.83□□□□□ -1.32
CALD1-202ENST00000361901 TRGV1A0A0A0MS02 117 aa6.82□□□□□ -1.32
CALD1-202ENST00000361901 A0A0U1RRA0 63 aa6.82□□□□□ -1.32
CALD1-202ENST00000361901 MRPL53Q96EL3 112 aaKnown RBP6.82□□□□□ -1.32
CALD1-202ENST00000361901 A0A0B4J2C4 111 aa6.82□□□□□ -1.32
CALD1-202ENST00000361901 C4orf3Q8WVX3 66 aa6.82□□□□□ -1.32
CALD1-202ENST00000361901 U3KQE9 123 aa6.82□□□□□ -1.32
CALD1-202ENST00000361901 TRGV2A0A075B6R0 118 aa6.82□□□□□ -1.32
CALD1-202ENST00000361901 IGHV3-33P01772 117 aa6.82□□□□□ -1.32
CALD1-202ENST00000361901 NDUFC2O95298 119 aa6.82□□□□□ -1.32
CALD1-202ENST00000361901 DPH3Q96FX2 82 aa6.82□□□□□ -1.32
CALD1-202ENST00000361901 TENM4Q6N022 2769 aa6.81□□□□□ -1.32
CALD1-202ENST00000361901 A0A0J9YX75 114 aa6.81□□□□□ -1.32
CALD1-202ENST00000361901 TMEM89A2RUT3 159 aa6.81□□□□□ -1.32
CALD1-202ENST00000361901 ADARB2-AS1A8MUL3 147 aa6.81□□□□□ -1.32
CALD1-202ENST00000361901 GAS8-AS1O95177 125 aa6.81□□□□□ -1.32
CALD1-202ENST00000361901 ZFAND2AQ8N6M9 145 aa6.81□□□□□ -1.32
CALD1-202ENST00000361901 RPL39LQ96EH5 51 aaKnown RBP6.81□□□□□ -1.32
CALD1-202ENST00000361901 A0A0J9YY99 117 aa6.81□□□□□ -1.32
CALD1-202ENST00000361901 K7EQG2 157 aa6.81□□□□□ -1.32
CALD1-202ENST00000361901 SDIM1Q6ZPB5 146 aa6.81□□□□□ -1.32
CALD1-202ENST00000361901 ZNRF2Q8NHG8 242 aa6.81□□□□□ -1.32
CALD1-202ENST00000361901 SMIM2Q9BVW6 85 aa6.81□□□□□ -1.32
CALD1-202ENST00000361901 ZMAT4Q9H898 229 aa6.81□□□□□ -1.32
CALD1-202ENST00000361901 CUBNO60494 3623 aa6.81□□□□□ -1.32
CALD1-202ENST00000361901 PYGO1Q9Y3Y4 419 aa6.81□□□□□ -1.32
CALD1-202ENST00000361901 ICOSQ9Y6W8 199 aa6.81□□□□□ -1.32
CALD1-202ENST00000361901 IGKV3OR2-268A0A0C4DH90 116 aa6.8□□□□□ -1.32
CALD1-202ENST00000361901 COPS9Q8WXC6 57 aa6.8□□□□□ -1.32
CALD1-202ENST00000361901 WFDC10AQ9H1F0 79 aa6.8□□□□□ -1.32
CALD1-202ENST00000361901 RBMY1BA6NDE4 496 aaKnown RBP6.8□□□□□ -1.32
CALD1-202ENST00000361901 RBMY1EA6NEQ0 496 aaKnown RBP6.8□□□□□ -1.32
CALD1-202ENST00000361901 RBMY1DP0C7P1 496 aaKnown RBP6.8□□□□□ -1.32
CALD1-202ENST00000361901 RBMY1A1P0DJD3 496 aaKnown RBP6.8□□□□□ -1.32
CALD1-202ENST00000361901 RBMY1CP0DJD4 496 aa6.8□□□□□ -1.32
CALD1-202ENST00000361901 RBMY1FQ15415 496 aaKnown RBP6.8□□□□□ -1.32
CALD1-202ENST00000361901 TMEM86BQ8N661 226 aa6.8□□□□□ -1.32
CALD1-202ENST00000361901 DCANP1Q8TF63 244 aa6.8□□□□□ -1.32
CALD1-202ENST00000361901 TRBV6-1A0A0K0K1D8 114 aa6.8□□□□□ -1.32
CALD1-202ENST00000361901 INSP01308 110 aa6.8□□□□□ -1.32
CALD1-202ENST00000361901 ZNF625Q96I27 306 aaPredicted RBP6.8□□□□□ -1.32
CALD1-202ENST00000361901 CR1P17927 2039 aa6.79□□□□□ -1.32
CALD1-202ENST00000361901 TRIAP1O43715 76 aa6.79□□□□□ -1.32
CALD1-202ENST00000361901 INAFM2P0DMQ5 153 aa6.79□□□□□ -1.32
CALD1-202ENST00000361901 HTN3P15516 51 aa6.79□□□□□ -1.32
CALD1-202ENST00000361901 SUMO2P61956 95 aaKnown RBP6.79□□□□□ -1.32
CALD1-202ENST00000361901 BAALCQ8WXS3 180 aa6.79□□□□□ -1.32
CALD1-202ENST00000361901 LENEPQ9Y5L5 61 aa6.79□□□□□ -1.32
CALD1-202ENST00000361901 DEFB114Q30KQ6 69 aa6.79□□□□□ -1.32
CALD1-202ENST00000361901 C19orf54Q5BKX5 351 aa6.79□□□□□ -1.32
CALD1-202ENST00000361901 RETNQ9HD89 108 aa6.79□□□□□ -1.32
CALD1-202ENST00000361901 U3KQK5 164 aa6.79□□□□□ -1.32
CALD1-202ENST00000361901 C11orf86A6NJI1 115 aa6.79□□□□□ -1.32
CALD1-202ENST00000361901 DEFB130BP0DP73 79 aa6.79□□□□□ -1.32
CALD1-202ENST00000361901 DEFB130AP0DP74 79 aa6.79□□□□□ -1.32
CALD1-202ENST00000361901 C20orf197Q8N268 126 aa6.79□□□□□ -1.32
CALD1-202ENST00000361901 TP53TG1Q9Y2A0 90 aa6.79□□□□□ -1.32
CALD1-202ENST00000361901 TRAV12-1A0A0B4J245 112 aa6.78□□□□□ -1.32
CALD1-202ENST00000361901 TRBV7-7A0A0K0K1E9 115 aa6.78□□□□□ -1.32
CALD1-202ENST00000361901 KRTAP1-3Q8IUG1 177 aa6.78□□□□□ -1.32
CALD1-202ENST00000361901 IGHV3-38A0A0C4DH36 116 aa6.78□□□□□ -1.32
CALD1-202ENST00000361901 SERP2Q8N6R1 65 aa6.78□□□□□ -1.32
CALD1-202ENST00000361901 MAP6D1Q9H9H5 199 aa6.78□□□□□ -1.32
CALD1-202ENST00000361901 NIPBLQ6KC79 2804 aaeCLIP6.78□□□□□ -1.32
CALD1-202ENST00000361901 IGHV3-30P01768 117 aa6.78□□□□□ -1.32
CALD1-202ENST00000361901 P0DMU3 169 aa6.78□□□□□ -1.32
CALD1-202ENST00000361901 FAM231AP0DMU4 169 aa6.78□□□□□ -1.32
CALD1-202ENST00000361901 FAM231CP0DMU5 169 aa6.78□□□□□ -1.32
CALD1-202ENST00000361901 IGHV3-30-5P0DP03 117 aa6.78□□□□□ -1.32
CALD1-202ENST00000361901 SBSPONQ8IVN8 264 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms