RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 A6NDX4 124 aa9.97□□□□□ -0.81
CCDC144A-203ENST00000360495 C9orf85Q96MD7 179 aa9.97□□□□□ -0.81
CCDC144A-203ENST00000360495 GAS8-AS1O95177 125 aa9.97□□□□□ -0.81
CCDC144A-203ENST00000360495 EBI3Q14213 229 aa9.97□□□□□ -0.81
CCDC144A-203ENST00000360495 RETNQ9HD89 108 aa9.97□□□□□ -0.81
CCDC144A-203ENST00000360495 TRBV6-8A0A0A6YYG3 113 aa9.96□□□□□ -0.81
CCDC144A-203ENST00000360495 CRIP2P52943 208 aaPredicted RBP9.96□□□□□ -0.81
CCDC144A-203ENST00000360495 CSDC2Q9Y534 153 aaKnown RBP9.96□□□□□ -0.81
CCDC144A-203ENST00000360495 KLK5Q9Y337 293 aaPredicted RBP9.96□□□□□ -0.82
CCDC144A-203ENST00000360495 ODF3BA8MYP8 253 aa9.96□□□□□ -0.82
CCDC144A-203ENST00000360495 DENND4CQ5VZ89 1909 aa9.95□□□□□ -0.82
CCDC144A-203ENST00000360495 URB1-AS1Q96HZ7 61 aa9.95□□□□□ -0.82
CCDC144A-203ENST00000360495 COL4A3Q01955 1670 aa9.95□□□□□ -0.82
CCDC144A-203ENST00000360495 KIAA1671Q9BY89 1806 aa9.95□□□□□ -0.82
CCDC144A-203ENST00000360495 POM121L12Q8N7R1 296 aa9.95□□□□□ -0.82
CCDC144A-203ENST00000360495 CELA1Q9UNI1 258 aa9.95□□□□□ -0.82
CCDC144A-203ENST00000360495 LOC107984640A0A0U1RRK4 108 aa9.94□□□□□ -0.82
CCDC144A-203ENST00000360495 RNASE3P12724 160 aaKnown RBP9.94□□□□□ -0.82
CCDC144A-203ENST00000360495 MGAMO43451 1857 aa9.93□□□□□ -0.82
CCDC144A-203ENST00000360495 PLXNB1O43157 2135 aa9.93□□□□□ -0.82
CCDC144A-203ENST00000360495 POLR2KP53803 58 aaKnown RBP9.93□□□□□ -0.82
CCDC144A-203ENST00000360495 C11orf21Q9P2W6 132 aa9.93□□□□□ -0.82
CCDC144A-203ENST00000360495 UBE2D4Q9Y2X8 147 aa9.93□□□□□ -0.82
CCDC144A-203ENST00000360495 DEFB113Q30KQ7 82 aa9.93□□□□□ -0.82
CCDC144A-203ENST00000360495 ANAPC1Q9H1A4 1944 aa9.93□□□□□ -0.82
CCDC144A-203ENST00000360495 UBE2D1P51668 147 aa9.93□□□□□ -0.82
CCDC144A-203ENST00000360495 UBE2D3P61077 147 aa9.92□□□□□ -0.82
CCDC144A-203ENST00000360495 UBE2D2P62837 147 aa9.92□□□□□ -0.82
CCDC144A-203ENST00000360495 NTM-AS1Q6ZSK4 140 aa9.92□□□□□ -0.82
CCDC144A-203ENST00000360495 IGKV2-28A0A075B6P5 120 aa9.91□□□□□ -0.82
CCDC144A-203ENST00000360495 IGKV2D-28P01615 120 aa9.91□□□□□ -0.82
CCDC144A-203ENST00000360495 TRBV6-4A0A1B0GX49 114 aa9.91□□□□□ -0.82
CCDC144A-203ENST00000360495 FRMPD3Q5JV73 1810 aa9.91□□□□□ -0.82
CCDC144A-203ENST00000360495 PRR9Q5T870 116 aa9.91□□□□□ -0.82
CCDC144A-203ENST00000360495 A0A087WZ39 114 aa9.9□□□□□ -0.82
CCDC144A-203ENST00000360495 PRYO14603 147 aa9.9□□□□□ -0.82
CCDC144A-203ENST00000360495 PIP4P1Q86T03 277 aa9.9□□□□□ -0.82
CCDC144A-203ENST00000360495 PPDPFQ9H3Y8 114 aa9.9□□□□□ -0.82
CCDC144A-203ENST00000360495 DHRS4-AS1Q9P1J3 65 aa9.9□□□□□ -0.82
CCDC144A-203ENST00000360495 PLXNB3Q9ULL4 1909 aa9.9□□□□□ -0.83
CCDC144A-203ENST00000360495 TANC1Q9C0D5 1861 aa9.9□□□□□ -0.83
CCDC144A-203ENST00000360495 C14orf177Q52M58 125 aa9.9□□□□□ -0.83
CCDC144A-203ENST00000360495 WFDC10AQ9H1F0 79 aa9.9□□□□□ -0.83
CCDC144A-203ENST00000360495 M0R378 163 aa9.89□□□□□ -0.83
CCDC144A-203ENST00000360495 NANOS2P60321 138 aaKnown RBP9.89□□□□□ -0.83
CCDC144A-203ENST00000360495 NCOA6Q14686 2063 aaPredicted RBP9.89□□□□□ -0.83
CCDC144A-203ENST00000360495 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.89□□□□□ -0.83
CCDC144A-203ENST00000360495 ADORA2A-AS1P86434 159 aa9.89□□□□□ -0.83
CCDC144A-203ENST00000360495 IGIPA6NJ69 53 aa9.89□□□□□ -0.83
CCDC144A-203ENST00000360495 PSPHP1O15172 72 aa9.89□□□□□ -0.83
CCDC144A-203ENST00000360495 SYCNQ0VAF6 134 aa9.88□□□□□ -0.83
CCDC144A-203ENST00000360495 KIR2DL5BQ8NHK3 375 aa9.88□□□□□ -0.83
CCDC144A-203ENST00000360495 CD164L2Q6UWJ8 174 aa9.88□□□□□ -0.83
CCDC144A-203ENST00000360495 NRGNQ92686 78 aa9.88□□□□□ -0.83
CCDC144A-203ENST00000360495 DEFB114Q30KQ6 69 aa9.88□□□□□ -0.83
CCDC144A-203ENST00000360495 ZNF73O43830 326 aaPredicted RBP9.87□□□□□ -0.83
CCDC144A-203ENST00000360495 Q6ZSV7 163 aa9.87□□□□□ -0.83
CCDC144A-203ENST00000360495 CNFNQ9BYD5 112 aa9.87□□□□□ -0.83
CCDC144A-203ENST00000360495 CRYGDP07320 174 aa9.87□□□□□ -0.83
CCDC144A-203ENST00000360495 WISP2O76076 250 aa9.87□□□□□ -0.83
CCDC144A-203ENST00000360495 IGHV4-30-4P0DP06 118 aa9.87□□□□□ -0.83
CCDC144A-203ENST00000360495 IGHV4-31P0DP07 118 aa9.87□□□□□ -0.83
CCDC144A-203ENST00000360495 LINC00959A0A1B0GUT2 108 aa9.86□□□□□ -0.83
CCDC144A-203ENST00000360495 LINC00208Q96KT6 92 aa9.86□□□□□ -0.83
CCDC144A-203ENST00000360495 TNFRSF13BO14836 293 aaPredicted RBP9.85□□□□□ -0.83
CCDC144A-203ENST00000360495 SHISA2Q6UWI4 295 aa9.85□□□□□ -0.83
CCDC144A-203ENST00000360495 IGLV4-69A0A075B6H9 119 aa9.85□□□□□ -0.83
CCDC144A-203ENST00000360495 TSPEAR-AS2P59090 65 aa9.85□□□□□ -0.83
CCDC144A-203ENST00000360495 SPINK6Q6UWN8 80 aa9.85□□□□□ -0.83
CCDC144A-203ENST00000360495 Q8N3U1 123 aa9.85□□□□□ -0.83
CCDC144A-203ENST00000360495 NOTCH4Q99466 2003 aa9.85□□□□□ -0.83
CCDC144A-203ENST00000360495 C11orf45Q8TAV5 145 aa9.84□□□□□ -0.83
CCDC144A-203ENST00000360495 RPL28P46779 137 aaKnown RBP9.84□□□□□ -0.83
CCDC144A-203ENST00000360495 COX17Q14061 63 aa9.84□□□□□ -0.83
CCDC144A-203ENST00000360495 LY6LH3BQJ8 138 aa9.84□□□□□ -0.83
CCDC144A-203ENST00000360495 PRO0628Q9UI54 55 aa9.84□□□□□ -0.83
CCDC144A-203ENST00000360495 A0A087WYN8 130 aa9.84□□□□□ -0.83
CCDC144A-203ENST00000360495 KLLNB2CW77 178 aa9.84□□□□□ -0.83
CCDC144A-203ENST00000360495 CDIP1Q9H305 208 aa9.84□□□□□ -0.83
CCDC144A-203ENST00000360495 Q8N814 137 aa9.84□□□□□ -0.83
CCDC144A-203ENST00000360495 DAZAP2Q15038 168 aaPredicted RBP9.83□□□□□ -0.84
CCDC144A-203ENST00000360495 LMO4P61968 165 aa9.83□□□□□ -0.84
CCDC144A-203ENST00000360495 TRBV7-7A0A0K0K1E9 115 aa9.83□□□□□ -0.84
CCDC144A-203ENST00000360495 BBC3Q96PG8 261 aaPredicted RBP9.82□□□□□ -0.84
CCDC144A-203ENST00000360495 PTPRQQ9UMZ3 2332 aa9.82□□□□□ -0.84
CCDC144A-203ENST00000360495 LOC100131303A0A0U1RQF7 123 aa9.82□□□□□ -0.84
CCDC144A-203ENST00000360495 SORL1Q92673 2214 aa9.81□□□□□ -0.84
CCDC144A-203ENST00000360495 J3QKU1 62 aa9.81□□□□□ -0.84
CCDC144A-203ENST00000360495 Q8IZM0 81 aa9.81□□□□□ -0.84
CCDC144A-203ENST00000360495 PRR14LQ5THK1 2151 aa9.81□□□□□ -0.84
CCDC144A-203ENST00000360495 LINC00242Q5T6M2 205 aa9.81□□□□□ -0.84
CCDC144A-203ENST00000360495 CDC42SE2Q9NRR3 84 aa9.81□□□□□ -0.84
CCDC144A-203ENST00000360495 MED12LQ86YW9 2145 aa9.81□□□□□ -0.84
CCDC144A-203ENST00000360495 TRBV7-6A0A0J9YX20 115 aa9.81□□□□□ -0.84
CCDC144A-203ENST00000360495 DNAJC9-AS1A6NH13 148 aa9.8□□□□□ -0.84
CCDC144A-203ENST00000360495 RPL37AP8A6NKH3 93 aa9.8□□□□□ -0.84
CCDC144A-203ENST00000360495 ADAMTSL4-AS1Q5T5F5 129 aa9.8□□□□□ -0.84
CCDC144A-203ENST00000360495 FBXL19-AS1Q494R0 122 aa9.79□□□□□ -0.84
CCDC144A-203ENST00000360495 IGF2-ASQ6U949 168 aa9.79□□□□□ -0.84
CCDC144A-203ENST00000360495 A0A096LNJ9 63 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms