RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 PRM2P04554 102 aa11.92□□□□□ -0.5
COL18A1-203ENST00000359759 C10orf99Q6UWK7 81 aa11.92□□□□□ -0.5
COL18A1-203ENST00000359759 K7EQG2 157 aa11.91□□□□□ -0.5
COL18A1-203ENST00000359759 BRWD1-AS2P59051 145 aa11.91□□□□□ -0.5
COL18A1-203ENST00000359759 NANOS2P60321 138 aaKnown RBP11.91□□□□□ -0.5
COL18A1-203ENST00000359759 SYCNQ0VAF6 134 aa11.91□□□□□ -0.5
COL18A1-203ENST00000359759 UBE2D4Q9Y2X8 147 aa11.91□□□□□ -0.5
COL18A1-203ENST00000359759 ODF3BA8MYP8 253 aa11.91□□□□□ -0.5
COL18A1-203ENST00000359759 CELA1Q9UNI1 258 aa11.91□□□□□ -0.5
COL18A1-203ENST00000359759 NDUFC1O43677 76 aa11.9□□□□□ -0.5
COL18A1-203ENST00000359759 TANC2Q9HCD6 1990 aa11.9□□□□□ -0.5
COL18A1-203ENST00000359759 PCNX2A6NKB5 2137 aa11.9□□□□□ -0.5
COL18A1-203ENST00000359759 P0C879 139 aa11.9□□□□□ -0.5
COL18A1-203ENST00000359759 Q6ZS46 218 aa11.89□□□□□ -0.51
COL18A1-203ENST00000359759 RBX1P62877 108 aa11.89□□□□□ -0.51
COL18A1-203ENST00000359759 U3KQK5 164 aa11.89□□□□□ -0.51
COL18A1-203ENST00000359759 SOSTDC1Q6X4U4 206 aa11.89□□□□□ -0.51
COL18A1-203ENST00000359759 Q6ZPA2 131 aa11.89□□□□□ -0.51
COL18A1-203ENST00000359759 ZNF295-AS1Q8N0V1 137 aa11.89□□□□□ -0.51
COL18A1-203ENST00000359759 COX7CP15954 63 aa11.88□□□□□ -0.51
COL18A1-203ENST00000359759 SHANK1Q9Y566 2161 aa11.88□□□□□ -0.51
COL18A1-203ENST00000359759 A0A1W2PNU3 283 aaPredicted RBP11.88□□□□□ -0.51
COL18A1-203ENST00000359759 XGP55808 180 aa11.88□□□□□ -0.51
COL18A1-203ENST00000359759 UBE2D3P61077 147 aa11.88□□□□□ -0.51
COL18A1-203ENST00000359759 C7orf33Q8WU49 177 aa11.88□□□□□ -0.51
COL18A1-203ENST00000359759 TSHBP01222 138 aa11.88□□□□□ -0.51
COL18A1-203ENST00000359759 TNFRSF13BO14836 293 aaPredicted RBP11.88□□□□□ -0.51
COL18A1-203ENST00000359759 Q6YL49 198 aa11.88□□□□□ -0.51
COL18A1-203ENST00000359759 RETNLBQ9BQ08 111 aa11.88□□□□□ -0.51
COL18A1-203ENST00000359759 C2orf91Q6ZV80 131 aa11.87□□□□□ -0.51
COL18A1-203ENST00000359759 NOTCH4Q99466 2003 aa11.87□□□□□ -0.51
COL18A1-203ENST00000359759 Q6Q795 121 aa11.87□□□□□ -0.51
COL18A1-203ENST00000359759 KIAA1549Q9HCM3 1950 aa11.87□□□□□ -0.51
COL18A1-203ENST00000359759 NCOA6Q14686 2063 aaPredicted RBP11.87□□□□□ -0.51
COL18A1-203ENST00000359759 C19orf84I3L1E1 186 aa11.87□□□□□ -0.51
COL18A1-203ENST00000359759 IL17DQ8TAD2 202 aa11.87□□□□□ -0.51
COL18A1-203ENST00000359759 SMIM9A6NGZ8 99 aa11.86□□□□□ -0.51
COL18A1-203ENST00000359759 CLUHP3Q96NS8 147 aa11.85□□□□□ -0.51
COL18A1-203ENST00000359759 WFDC10AQ9H1F0 79 aa11.85□□□□□ -0.51
COL18A1-203ENST00000359759 INAFM1C9JVW0 142 aa11.85□□□□□ -0.51
COL18A1-203ENST00000359759 M0R378 163 aa11.85□□□□□ -0.51
COL18A1-203ENST00000359759 LST1O00453 97 aa11.85□□□□□ -0.51
COL18A1-203ENST00000359759 M0QXV9 152 aa11.84□□□□□ -0.51
COL18A1-203ENST00000359759 TMEM131Q92545 1883 aa11.84□□□□□ -0.51
COL18A1-203ENST00000359759 LMO4P61968 165 aa11.84□□□□□ -0.51
COL18A1-203ENST00000359759 DHRS4-AS1Q9P1J3 65 aa11.84□□□□□ -0.51
COL18A1-203ENST00000359759 PLAC8L1A1L4L8 177 aa11.83□□□□□ -0.52
COL18A1-203ENST00000359759 GAS8-AS1O95177 125 aa11.83□□□□□ -0.52
COL18A1-203ENST00000359759 EBI3Q14213 229 aa11.83□□□□□ -0.52
COL18A1-203ENST00000359759 TRBV6-4A0A1B0GX49 114 aa11.83□□□□□ -0.52
COL18A1-203ENST00000359759 NRACQ8N912 160 aa11.83□□□□□ -0.52
COL18A1-203ENST00000359759 MIFP14174 115 aa11.83□□□□□ -0.52
COL18A1-203ENST00000359759 C18orf65Q6ZTR6 163 aa11.83□□□□□ -0.52
COL18A1-203ENST00000359759 LINC00959A0A1B0GUT2 108 aa11.82□□□□□ -0.52
COL18A1-203ENST00000359759 PRR9Q5T870 116 aa11.82□□□□□ -0.52
COL18A1-203ENST00000359759 Q6ZVQ6 151 aa11.82□□□□□ -0.52
COL18A1-203ENST00000359759 Q8NA96 180 aa11.81□□□□□ -0.52
COL18A1-203ENST00000359759 SPTAN1Q13813 2472 aaKnown RBP11.81□□□□□ -0.52
COL18A1-203ENST00000359759 CD164L2Q6UWJ8 174 aa11.81□□□□□ -0.52
COL18A1-203ENST00000359759 IMUPQ9GZP8 106 aa11.81□□□□□ -0.52
COL18A1-203ENST00000359759 ESRGQ1W209 222 aa11.81□□□□□ -0.52
COL18A1-203ENST00000359759 GPR179Q6PRD1 2367 aa11.81□□□□□ -0.52
COL18A1-203ENST00000359759 TNCP24821 2201 aa11.8□□□□□ -0.52
COL18A1-203ENST00000359759 IGLV2-11P01706 119 aa11.8□□□□□ -0.52
COL18A1-203ENST00000359759 PMAIP1Q13794 54 aa11.8□□□□□ -0.52
COL18A1-203ENST00000359759 ZNF706Q9Y5V0 76 aaPredicted RBP11.8□□□□□ -0.52
COL18A1-203ENST00000359759 RNASE3P12724 160 aaKnown RBP11.8□□□□□ -0.52
COL18A1-203ENST00000359759 UBE2D2P62837 147 aa11.8□□□□□ -0.52
COL18A1-203ENST00000359759 MUC6Q6W4X9 2439 aa11.8□□□□□ -0.52
COL18A1-203ENST00000359759 PCNX1Q96RV3 2341 aa11.79□□□□□ -0.52
COL18A1-203ENST00000359759 KIAA1549LQ6ZVL6 1849 aa11.79□□□□□ -0.52
COL18A1-203ENST00000359759 LRRC75A-AS1Q8N1F1 130 aa11.79□□□□□ -0.52
COL18A1-203ENST00000359759 X6R8D5 127 aa11.79□□□□□ -0.52
COL18A1-203ENST00000359759 EIF4EBP1Q13541 118 aaPredicted RBP11.79□□□□□ -0.52
COL18A1-203ENST00000359759 IGLV4-69A0A075B6H9 119 aa11.79□□□□□ -0.52
COL18A1-203ENST00000359759 IGF2-ASQ6U949 168 aa11.79□□□□□ -0.52
COL18A1-203ENST00000359759 COL4A3Q01955 1670 aa11.79□□□□□ -0.52
COL18A1-203ENST00000359759 ZNF73O43830 326 aaPredicted RBP11.79□□□□□ -0.52
COL18A1-203ENST00000359759 YPEL4Q96NS1 127 aa11.79□□□□□ -0.52
COL18A1-203ENST00000359759 KPRPQ5T749 579 aaPredicted RBP11.78□□□□□ -0.52
COL18A1-203ENST00000359759 A0A087WVE0 104 aa11.78□□□□□ -0.52
COL18A1-203ENST00000359759 Q6ZSV7 163 aa11.78□□□□□ -0.52
COL18A1-203ENST00000359759 PYGO1Q9Y3Y4 419 aa11.78□□□□□ -0.52
COL18A1-203ENST00000359759 C11orf21Q9P2W6 132 aa11.77□□□□□ -0.53
COL18A1-203ENST00000359759 NUP210LQ5VU65 1888 aa11.77□□□□□ -0.53
COL18A1-203ENST00000359759 LOC107984640A0A0U1RRK4 108 aa11.77□□□□□ -0.53
COL18A1-203ENST00000359759 Q6JHZ5 121 aa11.77□□□□□ -0.53
COL18A1-203ENST00000359759 PSPHP1O15172 72 aa11.76□□□□□ -0.53
COL18A1-203ENST00000359759 LINC00208Q96KT6 92 aa11.76□□□□□ -0.53
COL18A1-203ENST00000359759 C10orf25Q5T742 122 aa11.76□□□□□ -0.53
COL18A1-203ENST00000359759 TRAV10A0A0B4J240 114 aa11.76□□□□□ -0.53
COL18A1-203ENST00000359759 C2orf16Q68DN1 1984 aa11.75□□□□□ -0.53
COL18A1-203ENST00000359759 LY6G6CO95867 125 aa11.75□□□□□ -0.53
COL18A1-203ENST00000359759 LINC00574Q9H8X3 128 aa11.75□□□□□ -0.53
COL18A1-203ENST00000359759 C9orf116Q5BN46 136 aaPredicted RBP11.75□□□□□ -0.53
COL18A1-203ENST00000359759 SMIM26A0A096LP01 95 aa11.75□□□□□ -0.53
COL18A1-203ENST00000359759 CRIP2P52943 208 aaPredicted RBP11.75□□□□□ -0.53
COL18A1-203ENST00000359759 ZFHX2Q9C0A1 2572 aaPredicted RBP11.74□□□□□ -0.53
COL18A1-203ENST00000359759 CRIP3Q6Q6R5 217 aa11.74□□□□□ -0.53
COL18A1-203ENST00000359759 CIRBP-AS1Q8TBR5 109 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms