RNA–Protein interactions for RNA: ENST00000359680.9

TRAPPC2-201, Transcript of trafficking protein particle complex 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-201ENST00000359680 LINC00242Q5T6M2 205 aa7.17□□□□□ -1.26
TRAPPC2-201ENST00000359680 SOSTDC1Q6X4U4 206 aa7.17□□□□□ -1.26
TRAPPC2-201ENST00000359680 C3orf22Q8N5N4 141 aa7.17□□□□□ -1.26
TRAPPC2-201ENST00000359680 CCL19Q99731 98 aa7.17□□□□□ -1.26
TRAPPC2-201ENST00000359680 PRORYQ9H606 182 aa7.17□□□□□ -1.26
TRAPPC2-201ENST00000359680 CREBBPQ92793 2442 aa7.17□□□□□ -1.26
TRAPPC2-201ENST00000359680 INAFM2P0DMQ5 153 aa7.17□□□□□ -1.26
TRAPPC2-201ENST00000359680 CSPG4Q6UVK1 2322 aa7.17□□□□□ -1.26
TRAPPC2-201ENST00000359680 IGHV4-30-2A0A087WSY4 118 aa7.16□□□□□ -1.26
TRAPPC2-201ENST00000359680 ATP5G1P05496 136 aa7.16□□□□□ -1.26
TRAPPC2-201ENST00000359680 PEMTQ9UBM1 199 aa7.16□□□□□ -1.26
TRAPPC2-201ENST00000359680 TRAV13-1A0A0B4J241 112 aa7.16□□□□□ -1.26
TRAPPC2-201ENST00000359680 RBMY1BA6NDE4 496 aaKnown RBP7.16□□□□□ -1.26
TRAPPC2-201ENST00000359680 RBMY1EA6NEQ0 496 aaKnown RBP7.16□□□□□ -1.26
TRAPPC2-201ENST00000359680 SMIM1B2RUZ4 78 aa7.16□□□□□ -1.26
TRAPPC2-201ENST00000359680 UQCRQO14949 82 aa7.16□□□□□ -1.26
TRAPPC2-201ENST00000359680 AVPP01185 164 aa7.16□□□□□ -1.26
TRAPPC2-201ENST00000359680 RBMY1DP0C7P1 496 aaKnown RBP7.16□□□□□ -1.26
TRAPPC2-201ENST00000359680 ATP5J2P56134 94 aa7.16□□□□□ -1.26
TRAPPC2-201ENST00000359680 LY6DQ14210 128 aa7.15□□□□□ -1.26
TRAPPC2-201ENST00000359680 BEAN1Q3B7T3 259 aa7.15□□□□□ -1.26
TRAPPC2-201ENST00000359680 GAGE2AQ6NT46 116 aa7.15□□□□□ -1.26
TRAPPC2-201ENST00000359680 VPS13CQ709C8 3753 aa7.15□□□□□ -1.26
TRAPPC2-201ENST00000359680 CXCL5P42830 114 aa7.15□□□□□ -1.26
TRAPPC2-201ENST00000359680 DEFB112Q30KQ8 113 aa7.15□□□□□ -1.26
TRAPPC2-201ENST00000359680 FAM222AQ5U5X8 452 aa7.15□□□□□ -1.26
TRAPPC2-201ENST00000359680 A8MTW9 85 aa7.14□□□□□ -1.27
TRAPPC2-201ENST00000359680 RS1O15537 224 aa7.14□□□□□ -1.27
TRAPPC2-201ENST00000359680 NDUFA7O95182 113 aa7.14□□□□□ -1.27
TRAPPC2-201ENST00000359680 C11orf72Q8NBR9 251 aa7.14□□□□□ -1.27
TRAPPC2-201ENST00000359680 CRYBG3Q68DQ2 2970 aa7.14□□□□□ -1.27
TRAPPC2-201ENST00000359680 B4DSR2 109 aa7.14□□□□□ -1.27
TRAPPC2-201ENST00000359680 FAM218AQ96MZ4 157 aa7.14□□□□□ -1.27
TRAPPC2-201ENST00000359680 VPREB3Q9UKI3 123 aa7.14□□□□□ -1.27
TRAPPC2-201ENST00000359680 LINC00694P0DN24 101 aa7.14□□□□□ -1.27
TRAPPC2-201ENST00000359680 LCE2DQ5TA82 110 aaPredicted RBP7.14□□□□□ -1.27
TRAPPC2-201ENST00000359680 HIST2H2BCQ6DN03 193 aa7.14□□□□□ -1.27
TRAPPC2-201ENST00000359680 HIST2H2BDQ6DRA6 164 aa7.14□□□□□ -1.27
TRAPPC2-201ENST00000359680 SDIM1Q6ZPB5 146 aa7.14□□□□□ -1.27
TRAPPC2-201ENST00000359680 UBE2E2Q96LR5 201 aa7.14□□□□□ -1.27
TRAPPC2-201ENST00000359680 MAP1AP78559 2803 aaPredicted RBP7.13□□□□□ -1.27
TRAPPC2-201ENST00000359680 TRAV13-2A0A0B4J235 113 aa7.13□□□□□ -1.27
TRAPPC2-201ENST00000359680 INSP01308 110 aa7.13□□□□□ -1.27
TRAPPC2-201ENST00000359680 CRPP02741 224 aa7.13□□□□□ -1.27
TRAPPC2-201ENST00000359680 LINC00526Q96FQ7 95 aa7.13□□□□□ -1.27
TRAPPC2-201ENST00000359680 Q9HAA7 133 aa7.13□□□□□ -1.27
TRAPPC2-201ENST00000359680 MALP21145 153 aa7.13□□□□□ -1.27
TRAPPC2-201ENST00000359680 SLURP1P55000 103 aa7.13□□□□□ -1.27
TRAPPC2-201ENST00000359680 FAM19A3Q7Z5A8 133 aa7.13□□□□□ -1.27
TRAPPC2-201ENST00000359680 C5orf38Q86SI9 138 aa7.13□□□□□ -1.27
TRAPPC2-201ENST00000359680 DNAL4O96015 105 aa7.12□□□□□ -1.27
TRAPPC2-201ENST00000359680 PF4P02776 101 aa7.12□□□□□ -1.27
TRAPPC2-201ENST00000359680 RPL36AP83881 106 aaKnown RBP7.12□□□□□ -1.27
TRAPPC2-201ENST00000359680 RPL36ALQ969Q0 106 aaKnown RBP7.12□□□□□ -1.27
TRAPPC2-201ENST00000359680 PPDPFQ9H3Y8 114 aa7.12□□□□□ -1.27
TRAPPC2-201ENST00000359680 DEFB136Q30KP8 78 aa7.12□□□□□ -1.27
TRAPPC2-201ENST00000359680 C22orf24Q9Y442 160 aa7.12□□□□□ -1.27
TRAPPC2-201ENST00000359680 CSDC2Q9Y534 153 aaKnown RBP7.12□□□□□ -1.27
TRAPPC2-201ENST00000359680 OVOL2Q9BRP0 275 aa7.11□□□□□ -1.27
TRAPPC2-201ENST00000359680 F5H768 121 aa7.11□□□□□ -1.27
TRAPPC2-201ENST00000359680 COX7CP15954 63 aa7.11□□□□□ -1.27
TRAPPC2-201ENST00000359680 RPL28P46779 137 aaKnown RBP7.11□□□□□ -1.27
TRAPPC2-201ENST00000359680 MAP6D1Q9H9H5 199 aa7.11□□□□□ -1.27
TRAPPC2-201ENST00000359680 SPG11Q96JI7 2443 aa7.11□□□□□ -1.27
TRAPPC2-201ENST00000359680 TRGV1A0A0A0MS02 117 aa7.1□□□□□ -1.27
TRAPPC2-201ENST00000359680 DYNLRB2Q8TF09 96 aa7.1□□□□□ -1.27
TRAPPC2-201ENST00000359680 ATOX1O00244 68 aa7.1□□□□□ -1.27
TRAPPC2-201ENST00000359680 CDC42SE2Q9NRR3 84 aa7.1□□□□□ -1.27
TRAPPC2-201ENST00000359680 K7EQD1 137 aa7.09□□□□□ -1.27
TRAPPC2-201ENST00000359680 UBE2L6O14933 153 aa7.09□□□□□ -1.27
TRAPPC2-201ENST00000359680 GNLYP22749 145 aa7.09□□□□□ -1.27
TRAPPC2-201ENST00000359680 NTM-AS1Q6ZSK4 140 aa7.09□□□□□ -1.27
TRAPPC2-201ENST00000359680 MIR7-3HGQ8N6C7 128 aa7.09□□□□□ -1.27
TRAPPC2-201ENST00000359680 SND1-IT1Q9HBX3 110 aa7.09□□□□□ -1.27
TRAPPC2-201ENST00000359680 XCL2Q9UBD3 114 aa7.09□□□□□ -1.27
TRAPPC2-201ENST00000359680 TRBV10-1A0A0K0K1A3 114 aa7.08□□□□□ -1.28
TRAPPC2-201ENST00000359680 C18orf65Q6ZTR6 163 aa7.08□□□□□ -1.28
TRAPPC2-201ENST00000359680 LINC00337Q8N6G1 96 aa7.08□□□□□ -1.28
TRAPPC2-201ENST00000359680 NRGNQ92686 78 aa7.08□□□□□ -1.28
TRAPPC2-201ENST00000359680 ZNF702PQ9H963 129 aa7.08□□□□□ -1.28
TRAPPC2-201ENST00000359680 TOMM7Q9P0U1 55 aa7.08□□□□□ -1.28
TRAPPC2-201ENST00000359680 KLK5Q9Y337 293 aaPredicted RBP7.08□□□□□ -1.28
TRAPPC2-201ENST00000359680 COX7B2Q8TF08 81 aa7.07□□□□□ -1.28
TRAPPC2-201ENST00000359680 Q96MF0 132 aa7.07□□□□□ -1.28
TRAPPC2-201ENST00000359680 C14orf132Q9NPU4 83 aa7.07□□□□□ -1.28
TRAPPC2-201ENST00000359680 J3KT08 172 aa7.07□□□□□ -1.28
TRAPPC2-201ENST00000359680 LINC00158P58513 81 aa7.07□□□□□ -1.28
TRAPPC2-201ENST00000359680 HIST1H4AP62805 103 aaKnown RBP7.07□□□□□ -1.28
TRAPPC2-201ENST00000359680 KRTAP3-3Q9BYR6 98 aa7.07□□□□□ -1.28
TRAPPC2-201ENST00000359680 KRTAP3-2Q9BYR7 98 aa7.07□□□□□ -1.28
TRAPPC2-201ENST00000359680 A0A087WYN8 130 aa7.07□□□□□ -1.28
TRAPPC2-201ENST00000359680 H0YGX0 51 aa7.07□□□□□ -1.28
TRAPPC2-201ENST00000359680 CRYGAP11844 174 aa7.07□□□□□ -1.28
TRAPPC2-201ENST00000359680 KHDC1LQ5JSQ8 128 aa7.07□□□□□ -1.28
TRAPPC2-201ENST00000359680 LINC01356Q8N9X3 169 aa7.07□□□□□ -1.28
TRAPPC2-201ENST00000359680 SMIM11BQ8TCY0 68 aa7.07□□□□□ -1.28
TRAPPC2-201ENST00000359680 C2orf48Q96LS8 159 aa7.07□□□□□ -1.28
TRAPPC2-201ENST00000359680 TMEM243Q9BU79 118 aa7.07□□□□□ -1.28
TRAPPC2-201ENST00000359680 IGKV2-28A0A075B6P5 120 aa7.06□□□□□ -1.28
TRAPPC2-201ENST00000359680 IGKV2D-28P01615 120 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms