RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 IGHV4-28A0A0C4DH34 117 aa4.61□□□□□ -1.67
VPS13B-203ENST00000358544 CLPSL1A2RUU4 121 aa4.61□□□□□ -1.67
VPS13B-203ENST00000358544 ELANEP08246 267 aa4.61□□□□□ -1.67
VPS13B-203ENST00000358544 UBE2D1P51668 147 aa4.61□□□□□ -1.67
VPS13B-203ENST00000358544 RUSC1-AS1Q66K80 236 aa4.61□□□□□ -1.67
VPS13B-203ENST00000358544 HOXB4P17483 251 aaPredicted RBP4.61□□□□□ -1.67
VPS13B-203ENST00000358544 MIR7-3HGQ8N6C7 128 aa4.61□□□□□ -1.67
VPS13B-203ENST00000358544 DEFB1P60022 68 aa4.6□□□□□ -1.67
VPS13B-203ENST00000358544 NRACQ8N912 160 aa4.6□□□□□ -1.67
VPS13B-203ENST00000358544 WT1P19544 449 aaPredicted RBP4.6□□□□□ -1.67
VPS13B-203ENST00000358544 KALRNO60229 2985 aa4.6□□□□□ -1.67
VPS13B-203ENST00000358544 SLPIP03973 132 aa4.6□□□□□ -1.67
VPS13B-203ENST00000358544 PCSK5Q92824 1860 aa4.6□□□□□ -1.67
VPS13B-203ENST00000358544 UBE2BP63146 152 aa4.6□□□□□ -1.67
VPS13B-203ENST00000358544 CLPSL2Q6UWE3 100 aa4.6□□□□□ -1.67
VPS13B-203ENST00000358544 COX6B1P14854 86 aa4.6□□□□□ -1.67
VPS13B-203ENST00000358544 LRBAP50851 2863 aa4.6□□□□□ -1.67
VPS13B-203ENST00000358544 A0A0G2JNJ9 132 aa4.6□□□□□ -1.67
VPS13B-203ENST00000358544 ZNF561-AS1K7EIQ3 104 aa4.6□□□□□ -1.67
VPS13B-203ENST00000358544 ODF3Q96PU9 254 aa4.6□□□□□ -1.67
VPS13B-203ENST00000358544 Q9UFV3 132 aa4.6□□□□□ -1.67
VPS13B-203ENST00000358544 CEMP1Q6PRD7 247 aaPredicted RBP4.6□□□□□ -1.67
VPS13B-203ENST00000358544 SCXQ7RTU7 201 aa4.6□□□□□ -1.67
VPS13B-203ENST00000358544 CHKB-CPT1BH3BT56 60 aa4.6□□□□□ -1.67
VPS13B-203ENST00000358544 LOC107984640A0A0U1RRK4 108 aa4.6□□□□□ -1.67
VPS13B-203ENST00000358544 SPRNQ5BIV9 151 aa4.59□□□□□ -1.67
VPS13B-203ENST00000358544 PRORYQ9H606 182 aa4.59□□□□□ -1.67
VPS13B-203ENST00000358544 CTSZQ9UBR2 303 aa4.59□□□□□ -1.67
VPS13B-203ENST00000358544 CHD7Q9P2D1 2997 aa4.59□□□□□ -1.67
VPS13B-203ENST00000358544 CCDC140Q96MF4 163 aa4.59□□□□□ -1.67
VPS13B-203ENST00000358544 MIFP14174 115 aa4.59□□□□□ -1.67
VPS13B-203ENST00000358544 DAZAP2Q15038 168 aaPredicted RBP4.59□□□□□ -1.67
VPS13B-203ENST00000358544 NF1P21359 2839 aa4.59□□□□□ -1.67
VPS13B-203ENST00000358544 LY6HO94772 140 aa4.59□□□□□ -1.67
VPS13B-203ENST00000358544 NOP10Q9NPE3 64 aaKnown RBP4.59□□□□□ -1.67
VPS13B-203ENST00000358544 Q6ZS46 218 aa4.59□□□□□ -1.67
VPS13B-203ENST00000358544 ETDCA0A1B0GVM5 59 aa4.59□□□□□ -1.68
VPS13B-203ENST00000358544 E7EUB6 86 aa4.59□□□□□ -1.68
VPS13B-203ENST00000358544 COX7BP24311 80 aa4.59□□□□□ -1.68
VPS13B-203ENST00000358544 C5orf38Q86SI9 138 aa4.59□□□□□ -1.68
VPS13B-203ENST00000358544 Q8N7P7 452 aa4.59□□□□□ -1.68
VPS13B-203ENST00000358544 FAM19A3Q7Z5A8 133 aa4.58□□□□□ -1.68
VPS13B-203ENST00000358544 CDKN2A-AS1Q9UH64 79 aa4.58□□□□□ -1.68
VPS13B-203ENST00000358544 RPS28P62857 69 aaKnown RBP4.58□□□□□ -1.68
VPS13B-203ENST00000358544 LY6DQ14210 128 aa4.58□□□□□ -1.68
VPS13B-203ENST00000358544 BPY2O14599 106 aa4.58□□□□□ -1.68
VPS13B-203ENST00000358544 J3QLI3 93 aa4.58□□□□□ -1.68
VPS13B-203ENST00000358544 GAS8-AS1O95177 125 aa4.58□□□□□ -1.68
VPS13B-203ENST00000358544 C1orf229Q6ZS94 237 aaPredicted RBP4.58□□□□□ -1.68
VPS13B-203ENST00000358544 SOSTDC1Q6X4U4 206 aa4.58□□□□□ -1.68
VPS13B-203ENST00000358544 DIRC1Q969H9 104 aa4.58□□□□□ -1.68
VPS13B-203ENST00000358544 IGLV4-3A0A075B6K6 122 aa4.58□□□□□ -1.68
VPS13B-203ENST00000358544 M0QY20 66 aa4.58□□□□□ -1.68
VPS13B-203ENST00000358544 IGF1P05019 195 aa4.58□□□□□ -1.68
VPS13B-203ENST00000358544 PMAIP1Q13794 54 aa4.58□□□□□ -1.68
VPS13B-203ENST00000358544 RMI2Q96E14 147 aa4.58□□□□□ -1.68
VPS13B-203ENST00000358544 FAM215AQ9Y5M1 114 aa4.58□□□□□ -1.68
VPS13B-203ENST00000358544 TRAV7A0A075B6U4 112 aa4.58□□□□□ -1.68
VPS13B-203ENST00000358544 CGB3P0DN86 165 aa4.58□□□□□ -1.68
VPS13B-203ENST00000358544 CGB7P0DN87 165 aa4.58□□□□□ -1.68
VPS13B-203ENST00000358544 A0A096LNJ9 63 aa4.57□□□□□ -1.68
VPS13B-203ENST00000358544 GNLYP22749 145 aa4.57□□□□□ -1.68
VPS13B-203ENST00000358544 RETNQ9HD89 108 aa4.57□□□□□ -1.68
VPS13B-203ENST00000358544 A0A087WVE0 104 aa4.57□□□□□ -1.68
VPS13B-203ENST00000358544 TSPEAR-AS2P59090 65 aa4.57□□□□□ -1.68
VPS13B-203ENST00000358544 NIPBLQ6KC79 2804 aaeCLIP4.57□□□□□ -1.682e-7■■■□□ 16.1
VPS13B-203ENST00000358544 C11orf21Q9P2W6 132 aa4.57□□□□□ -1.68
VPS13B-203ENST00000358544 TRBV27A0A0K0K1C4 114 aa4.57□□□□□ -1.68
VPS13B-203ENST00000358544 B4DSR2 109 aa4.57□□□□□ -1.68
VPS13B-203ENST00000358544 IGLV4-69A0A075B6H9 119 aa4.57□□□□□ -1.68
VPS13B-203ENST00000358544 CRIP2P52943 208 aaPredicted RBP4.56□□□□□ -1.68
VPS13B-203ENST00000358544 DEFB105AQ8NG35 78 aa4.56□□□□□ -1.68
VPS13B-203ENST00000358544 CNFNQ9BYD5 112 aa4.56□□□□□ -1.68
VPS13B-203ENST00000358544 MUC7Q8TAX7 377 aa4.56□□□□□ -1.68
VPS13B-203ENST00000358544 BPESC1Q9GZL8 116 aa4.56□□□□□ -1.68
VPS13B-203ENST00000358544 PRR4Q16378 134 aa4.56□□□□□ -1.68
VPS13B-203ENST00000358544 GYPEP15421 78 aa4.56□□□□□ -1.68
VPS13B-203ENST00000358544 C4orf26Q17RF5 130 aa4.56□□□□□ -1.68
VPS13B-203ENST00000358544 IBA57-AS1B1ANH7 110 aa4.55□□□□□ -1.68
VPS13B-203ENST00000358544 NDUFS5O43920 106 aa4.55□□□□□ -1.68
VPS13B-203ENST00000358544 ANGP03950 147 aaKnown RBP4.55□□□□□ -1.68
VPS13B-203ENST00000358544 ZFAND2AQ8N6M9 145 aa4.55□□□□□ -1.68
VPS13B-203ENST00000358544 TRBV10-1A0A0K0K1A3 114 aa4.55□□□□□ -1.68
VPS13B-203ENST00000358544 CCKP06307 115 aa4.55□□□□□ -1.68
VPS13B-203ENST00000358544 LINC00467Q9BRT7 94 aa4.55□□□□□ -1.68
VPS13B-203ENST00000358544 C16orf74Q96GX8 76 aa4.55□□□□□ -1.68
VPS13B-203ENST00000358544 TSHBP01222 138 aa4.54□□□□□ -1.68
VPS13B-203ENST00000358544 SMCPP49901 116 aaPredicted RBP4.54□□□□□ -1.68
VPS13B-203ENST00000358544 PYGO1Q9Y3Y4 419 aa4.54□□□□□ -1.68
VPS13B-203ENST00000358544 KMT2BQ9UMN6 2715 aaPredicted RBP4.54□□□□□ -1.68
VPS13B-203ENST00000358544 K7EMT4 169 aa4.54□□□□□ -1.68
VPS13B-203ENST00000358544 PRR15LQ9BU68 103 aa4.54□□□□□ -1.68
VPS13B-203ENST00000358544 POM121L12Q8N7R1 296 aa4.53□□□□□ -1.68
VPS13B-203ENST00000358544 CAMK2N2Q96S95 79 aa4.53□□□□□ -1.68
VPS13B-203ENST00000358544 KIR2DL5BQ8NHK3 375 aa4.53□□□□□ -1.68
VPS13B-203ENST00000358544 A0A096LPF7 62 aa4.53□□□□□ -1.68
VPS13B-203ENST00000358544 PRR9Q5T870 116 aa4.53□□□□□ -1.68
VPS13B-203ENST00000358544 IGIPA6NJ69 53 aa4.53□□□□□ -1.68
VPS13B-203ENST00000358544 A8MZ25 164 aa4.53□□□□□ -1.68
VPS13B-203ENST00000358544 IGLV1-47P01700 117 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms