RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 VSIG2Q96IQ7 327 aa4.82□□□□□ -1.64
CSDE1-203ENST00000358528 HIVEP2P31629 2446 aa4.82□□□□□ -1.64
CSDE1-203ENST00000358528 IGLV1-40P01703 118 aa4.82□□□□□ -1.64
CSDE1-203ENST00000358528 H7C423 109 aa4.82□□□□□ -1.64
CSDE1-203ENST00000358528 RPL32P62910 135 aaKnown RBP4.82□□□□□ -1.64
CSDE1-203ENST00000358528 Q6ZSN1 163 aa4.82□□□□□ -1.64
CSDE1-203ENST00000358528 Q9HAA7 133 aa4.82□□□□□ -1.64
CSDE1-203ENST00000358528 TRGV4A0A0C4DH28 118 aa4.82□□□□□ -1.64
CSDE1-203ENST00000358528 FAM236AA0A1B0GUQ0 79 aa4.82□□□□□ -1.64
CSDE1-203ENST00000358528 FAM236BA0A1B0GV22 79 aa4.82□□□□□ -1.64
CSDE1-203ENST00000358528 PAX4O43316 350 aa4.82□□□□□ -1.64
CSDE1-203ENST00000358528 CRPP02741 224 aa4.82□□□□□ -1.64
CSDE1-203ENST00000358528 LINC01356Q8N9X3 169 aa4.82□□□□□ -1.64
CSDE1-203ENST00000358528 SPANXA1Q9NS26 97 aa4.82□□□□□ -1.64
CSDE1-203ENST00000358528 NXPH4O95158 308 aa4.81□□□□□ -1.64
CSDE1-203ENST00000358528 BAALC-AS2P0C853 105 aa4.81□□□□□ -1.64
CSDE1-203ENST00000358528 PSMB8P28062 276 aa4.81□□□□□ -1.64
CSDE1-203ENST00000358528 PIK3CD-AS1Q5SR53 167 aa4.81□□□□□ -1.64
CSDE1-203ENST00000358528 FAM19A4Q96LR4 140 aa4.81□□□□□ -1.64
CSDE1-203ENST00000358528 TRBV30A0A0K0K1B3 111 aa4.81□□□□□ -1.64
CSDE1-203ENST00000358528 RBMY1A1P0DJD3 496 aaKnown RBP4.81□□□□□ -1.64
CSDE1-203ENST00000358528 RBMY1CP0DJD4 496 aa4.81□□□□□ -1.64
CSDE1-203ENST00000358528 RBMY1FQ15415 496 aaKnown RBP4.81□□□□□ -1.64
CSDE1-203ENST00000358528 NOP10Q9NPE3 64 aaKnown RBP4.81□□□□□ -1.64
CSDE1-203ENST00000358528 ZNF462Q96JM2 2506 aa4.8□□□□□ -1.64
CSDE1-203ENST00000358528 COPS9Q8WXC6 57 aa4.8□□□□□ -1.64
CSDE1-203ENST00000358528 AMELXQ99217 191 aa4.8□□□□□ -1.64
CSDE1-203ENST00000358528 HERVK_113P63121 156 aa4.8□□□□□ -1.64
CSDE1-203ENST00000358528 CLPSL2Q6UWE3 100 aa4.8□□□□□ -1.64
CSDE1-203ENST00000358528 VPREB3Q9UKI3 123 aa4.8□□□□□ -1.64
CSDE1-203ENST00000358528 ITPR1Q14643 2758 aa4.8□□□□□ -1.64
CSDE1-203ENST00000358528 DOPEY1Q5JWR5 2465 aa4.8□□□□□ -1.64
CSDE1-203ENST00000358528 TINCRA0A1B0GVN0 87 aa4.8□□□□□ -1.64
CSDE1-203ENST00000358528 H3BT86 120 aa4.8□□□□□ -1.64
CSDE1-203ENST00000358528 C9orf153Q5TBE3 101 aa4.8□□□□□ -1.64
CSDE1-203ENST00000358528 UBE2D4Q9Y2X8 147 aa4.8□□□□□ -1.64
CSDE1-203ENST00000358528 EIF4EBP3O60516 100 aaPredicted RBP4.79□□□□□ -1.64
CSDE1-203ENST00000358528 DEFB130BP0DP73 79 aa4.79□□□□□ -1.64
CSDE1-203ENST00000358528 DEFB130AP0DP74 79 aa4.79□□□□□ -1.64
CSDE1-203ENST00000358528 MRPS36P82909 103 aaKnown RBP4.79□□□□□ -1.64
CSDE1-203ENST00000358528 COX6A2Q02221 97 aa4.79□□□□□ -1.64
CSDE1-203ENST00000358528 C5orf38Q86SI9 138 aa4.79□□□□□ -1.64
CSDE1-203ENST00000358528 EDA2RQ9HAV5 297 aa4.79□□□□□ -1.64
CSDE1-203ENST00000358528 CUBNO60494 3623 aa4.79□□□□□ -1.64
CSDE1-203ENST00000358528 A0A096LPF7 62 aa4.79□□□□□ -1.64
CSDE1-203ENST00000358528 FLNCQ14315 2725 aa4.79□□□□□ -1.64
CSDE1-203ENST00000358528 Q6ZTI0 123 aa4.79□□□□□ -1.64
CSDE1-203ENST00000358528 LINC00308Q8TCZ7 52 aa4.79□□□□□ -1.64
CSDE1-203ENST00000358528 ZANQ9Y493 2812 aa4.79□□□□□ -1.64
CSDE1-203ENST00000358528 MAP6D1Q9H9H5 199 aa4.78□□□□□ -1.64
CSDE1-203ENST00000358528 CRYBG3Q68DQ2 2970 aa4.78□□□□□ -1.64
CSDE1-203ENST00000358528 LST1O00453 97 aa4.78□□□□□ -1.64
CSDE1-203ENST00000358528 ATP5G1P05496 136 aa4.78□□□□□ -1.64
CSDE1-203ENST00000358528 DAZ2Q13117 558 aaKnown RBP4.78□□□□□ -1.64
CSDE1-203ENST00000358528 DAZ4Q86SG3 579 aaKnown RBP4.78□□□□□ -1.64
CSDE1-203ENST00000358528 ODF3Q96PU9 254 aa4.78□□□□□ -1.64
CSDE1-203ENST00000358528 DAZ3Q9NR90 486 aaKnown RBP4.78□□□□□ -1.64
CSDE1-203ENST00000358528 IGKV3D-7A0A0C4DH55 119 aa4.78□□□□□ -1.64
CSDE1-203ENST00000358528 LINC00694P0DN24 101 aa4.78□□□□□ -1.64
CSDE1-203ENST00000358528 HIST1H4AP62805 103 aaKnown RBP4.78□□□□□ -1.64
CSDE1-203ENST00000358528 C6orf226Q5I0X4 101 aa4.78□□□□□ -1.64
CSDE1-203ENST00000358528 TMEM243Q9BU79 118 aa4.78□□□□□ -1.64
CSDE1-203ENST00000358528 CHCHD7Q9BUK0 85 aa4.78□□□□□ -1.64
CSDE1-203ENST00000358528 PYGO1Q9Y3Y4 419 aa4.78□□□□□ -1.64
CSDE1-203ENST00000358528 PRB1P04280 392 aa4.77□□□□□ -1.65
CSDE1-203ENST00000358528 HERV-K104P63124 156 aa4.77□□□□□ -1.65
CSDE1-203ENST00000358528 MIR7-3HGQ8N6C7 128 aa4.77□□□□□ -1.65
CSDE1-203ENST00000358528 SPANXDQ9BXN6 97 aa4.77□□□□□ -1.65
CSDE1-203ENST00000358528 SND1-IT1Q9HBX3 110 aa4.77□□□□□ -1.65
CSDE1-203ENST00000358528 SPANXCQ9NY87 97 aa4.77□□□□□ -1.65
CSDE1-203ENST00000358528 CHD6Q8TD26 2715 aa4.77□□□□□ -1.65
CSDE1-203ENST00000358528 RBMY1BA6NDE4 496 aaKnown RBP4.77□□□□□ -1.65
CSDE1-203ENST00000358528 RBMY1EA6NEQ0 496 aaKnown RBP4.77□□□□□ -1.65
CSDE1-203ENST00000358528 RBMY1DP0C7P1 496 aaKnown RBP4.77□□□□□ -1.65
CSDE1-203ENST00000358528 SBSPONQ8IVN8 264 aa4.77□□□□□ -1.65
CSDE1-203ENST00000358528 LOC100131303A0A0U1RQF7 123 aa4.76□□□□□ -1.65
CSDE1-203ENST00000358528 COX7A2LO14548 114 aa4.76□□□□□ -1.65
CSDE1-203ENST00000358528 NDUFA1O15239 70 aa4.76□□□□□ -1.65
CSDE1-203ENST00000358528 XCL1P47992 114 aa4.76□□□□□ -1.65
CSDE1-203ENST00000358528 K7EQD1 137 aa4.76□□□□□ -1.65
CSDE1-203ENST00000358528 SLPIP03973 132 aa4.76□□□□□ -1.65
CSDE1-203ENST00000358528 LINC00242Q5T6M2 205 aa4.76□□□□□ -1.65
CSDE1-203ENST00000358528 Q8N2B8 174 aa4.76□□□□□ -1.65
CSDE1-203ENST00000358528 CITED1Q99966 193 aa4.76□□□□□ -1.65
CSDE1-203ENST00000358528 WFDC10AQ9H1F0 79 aa4.76□□□□□ -1.65
CSDE1-203ENST00000358528 C14orf132Q9NPU4 83 aa4.76□□□□□ -1.65
CSDE1-203ENST00000358528 DNAJC30Q96LL9 226 aa4.75□□□□□ -1.65
CSDE1-203ENST00000358528 LECT2O14960 151 aa4.75□□□□□ -1.65
CSDE1-203ENST00000358528 DSCR9P59020 149 aa4.75□□□□□ -1.65
CSDE1-203ENST00000358528 MRPL23Q16540 153 aaKnown RBP4.75□□□□□ -1.65
CSDE1-203ENST00000358528 KLK9Q2XQG4 91 aa4.75□□□□□ -1.65
CSDE1-203ENST00000358528 Q96MF0 132 aa4.75□□□□□ -1.65
CSDE1-203ENST00000358528 TMEM89A2RUT3 159 aa4.75□□□□□ -1.65
CSDE1-203ENST00000358528 HTN3P15516 51 aa4.75□□□□□ -1.65
CSDE1-203ENST00000358528 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.75□□□□□ -1.65
CSDE1-203ENST00000358528 LITAFQ99732 161 aa4.75□□□□□ -1.65
CSDE1-203ENST00000358528 UTP20O75691 2785 aaKnown RBP4.75□□□□□ -1.65
CSDE1-203ENST00000358528 INAFM2P0DMQ5 153 aa4.74□□□□□ -1.65
CSDE1-203ENST00000358528 SDIM1Q6ZPB5 146 aa4.74□□□□□ -1.65
CSDE1-203ENST00000358528 ZNF702PQ9H963 129 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms