RNA–Protein interactions for RNA: ENST00000358438.6

POLR2J2-202, Transcript of RNA polymerase II subunit J2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J2, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2-202ENST00000358438 ZNF256Q9Y2P7 627 aaPredicted RBP16.37■□□□□ 0.21
POLR2J2-202ENST00000358438 H3BMM0 161 aa16.36■□□□□ 0.21
POLR2J2-202ENST00000358438 SMIM20Q8N5G0 67 aa16.36■□□□□ 0.21
POLR2J2-202ENST00000358438 UBE2WQ96B02 151 aa16.36■□□□□ 0.21
POLR2J2-202ENST00000358438 VCYO14598 125 aa16.36■□□□□ 0.21
POLR2J2-202ENST00000358438 POLR2KP53803 58 aaKnown RBP16.36■□□□□ 0.21
POLR2J2-202ENST00000358438 MAP6D1Q9H9H5 199 aa16.36■□□□□ 0.21
POLR2J2-202ENST00000358438 KNCNA6PVL3 124 aa16.35■□□□□ 0.21
POLR2J2-202ENST00000358438 SPANXDQ9BXN6 97 aa16.35■□□□□ 0.21
POLR2J2-202ENST00000358438 TMEM126AQ9H061 195 aa16.35■□□□□ 0.21
POLR2J2-202ENST00000358438 TRAV12-3A0A0B4J271 114 aa16.34■□□□□ 0.21
POLR2J2-202ENST00000358438 SDHAF1A6NFY7 115 aa16.34■□□□□ 0.21
POLR2J2-202ENST00000358438 SPINK13Q1W4C9 94 aa16.34■□□□□ 0.21
POLR2J2-202ENST00000358438 H3BT86 120 aa16.34■□□□□ 0.21
POLR2J2-202ENST00000358438 EIF4EBP3O60516 100 aaPredicted RBP16.34■□□□□ 0.21
POLR2J2-202ENST00000358438 FAM159AQ6UWV7 190 aa16.34■□□□□ 0.21
POLR2J2-202ENST00000358438 TRAV12-2A0A075B6T6 113 aa16.33■□□□□ 0.21
POLR2J2-202ENST00000358438 ZNRF2Q8NHG8 242 aa16.33■□□□□ 0.21
POLR2J2-202ENST00000358438 KIF25-AS1Q9Y6Z4 181 aa16.32■□□□□ 0.2
POLR2J2-202ENST00000358438 TMEM223A0PJW6 202 aa16.31■□□□□ 0.2
POLR2J2-202ENST00000358438 A8MTW9 85 aa16.31■□□□□ 0.2
POLR2J2-202ENST00000358438 GNRH2O43555 120 aa16.31■□□□□ 0.2
POLR2J2-202ENST00000358438 DEFB121Q5J5C9 76 aa16.31■□□□□ 0.2
POLR2J2-202ENST00000358438 TNFRSF18Q9Y5U5 241 aa16.31■□□□□ 0.2
POLR2J2-202ENST00000358438 M0R2P5 195 aa16.31■□□□□ 0.2
POLR2J2-202ENST00000358438 LINC00315P59091 139 aa16.3■□□□□ 0.2
POLR2J2-202ENST00000358438 MUSTN1Q8IVN3 82 aa16.3■□□□□ 0.2
POLR2J2-202ENST00000358438 JMJD1CQ15652 2540 aa16.3■□□□□ 0.2
POLR2J2-202ENST00000358438 EMP1P54849 157 aa16.3■□□□□ 0.2
POLR2J2-202ENST00000358438 Q1RN00 199 aa16.3■□□□□ 0.2
POLR2J2-202ENST00000358438 ODF3L2Q3SX64 289 aa16.3■□□□□ 0.2
POLR2J2-202ENST00000358438 TRBV6-5A0A0K0K1A5 114 aa16.29■□□□□ 0.2
POLR2J2-202ENST00000358438 TRBV7-7A0A0K0K1E9 115 aa16.29■□□□□ 0.2
POLR2J2-202ENST00000358438 TEX49A0A1B0GTD5 131 aa16.29■□□□□ 0.2
POLR2J2-202ENST00000358438 RNASE3P12724 160 aaKnown RBP16.28■□□□□ 0.2
POLR2J2-202ENST00000358438 MEIG1Q5JSS6 88 aa16.28■□□□□ 0.2
POLR2J2-202ENST00000358438 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.28■□□□□ 0.2
POLR2J2-202ENST00000358438 TRBV27A0A0K0K1C4 114 aa16.28■□□□□ 0.2
POLR2J2-202ENST00000358438 IGLV1-51P01701 117 aa16.28■□□□□ 0.2
POLR2J2-202ENST00000358438 RBMY1BA6NDE4 496 aaKnown RBP16.27■□□□□ 0.2
POLR2J2-202ENST00000358438 RBMY1EA6NEQ0 496 aaKnown RBP16.27■□□□□ 0.2
POLR2J2-202ENST00000358438 PF4P02776 101 aa16.27■□□□□ 0.2
POLR2J2-202ENST00000358438 RBMY1DP0C7P1 496 aaKnown RBP16.27■□□□□ 0.2
POLR2J2-202ENST00000358438 C2orf82Q6UX34 121 aa16.27■□□□□ 0.2
POLR2J2-202ENST00000358438 RHOHQ15669 191 aa16.26■□□□□ 0.19
POLR2J2-202ENST00000358438 RPL39P62891 51 aaKnown RBP16.25■□□□□ 0.19
POLR2J2-202ENST00000358438 IMUPQ9GZP8 106 aa16.25■□□□□ 0.19
POLR2J2-202ENST00000358438 TENM1Q9UKZ4 2725 aa16.25■□□□□ 0.19
POLR2J2-202ENST00000358438 SPRY2O43597 315 aa16.25■□□□□ 0.19
POLR2J2-202ENST00000358438 TRIAP1O43715 76 aa16.25■□□□□ 0.19
POLR2J2-202ENST00000358438 COX6CP09669 75 aa16.25■□□□□ 0.19
POLR2J2-202ENST00000358438 H7C2G1 150 aa16.24■□□□□ 0.19
POLR2J2-202ENST00000358438 LINC00482Q8N8I6 264 aa16.24■□□□□ 0.19
POLR2J2-202ENST00000358438 IGHV1OR15-1A0A075B7D0 117 aa16.23■□□□□ 0.19
POLR2J2-202ENST00000358438 SUMO4Q6EEV6 95 aa16.23■□□□□ 0.19
POLR2J2-202ENST00000358438 H7C423 109 aa16.22■□□□□ 0.19
POLR2J2-202ENST00000358438 RBMY1A1P0DJD3 496 aaKnown RBP16.22■□□□□ 0.19
POLR2J2-202ENST00000358438 RBMY1CP0DJD4 496 aa16.22■□□□□ 0.19
POLR2J2-202ENST00000358438 ZNF22P17026 224 aaPredicted RBP16.22■□□□□ 0.19
POLR2J2-202ENST00000358438 RBMY1FQ15415 496 aaKnown RBP16.22■□□□□ 0.19
POLR2J2-202ENST00000358438 ICOSQ9Y6W8 199 aa16.22■□□□□ 0.19
POLR2J2-202ENST00000358438 IGHV3-16A0A0C4DH30 117 aa16.21■□□□□ 0.19
POLR2J2-202ENST00000358438 A0A0J9YXY3 114 aa16.21■□□□□ 0.19
POLR2J2-202ENST00000358438 ACYP1P07311 99 aa16.21■□□□□ 0.19
POLR2J2-202ENST00000358438 PRIMA1Q86XR5 153 aa16.21■□□□□ 0.19
POLR2J2-202ENST00000358438 MUC4Q99102 2169 aa16.21■□□□□ 0.19
POLR2J2-202ENST00000358438 TMEM101Q96IK0 257 aa16.2■□□□□ 0.18
POLR2J2-202ENST00000358438 SPANXCQ9NY87 97 aa16.2■□□□□ 0.18
POLR2J2-202ENST00000358438 STHQ8IWL8 128 aa16.2■□□□□ 0.18
POLR2J2-202ENST00000358438 CMC4P56277 68 aaPredicted RBP16.19■□□□□ 0.18
POLR2J2-202ENST00000358438 LINC01587Q99440 93 aa16.19■□□□□ 0.18
POLR2J2-202ENST00000358438 ATRQ13535 2644 aa16.19■□□□□ 0.18
POLR2J2-202ENST00000358438 BEAN1Q3B7T3 259 aa16.18■□□□□ 0.18
POLR2J2-202ENST00000358438 C9orf85Q96MD7 179 aa16.18■□□□□ 0.18
POLR2J2-202ENST00000358438 ZNF56Q15929 161 aa16.17■□□□□ 0.18
POLR2J2-202ENST00000358438 VWFP04275 2813 aa16.17■□□□□ 0.18
POLR2J2-202ENST00000358438 LST1O00453 97 aa16.17■□□□□ 0.18
POLR2J2-202ENST00000358438 LITAFQ99732 161 aa16.17■□□□□ 0.18
POLR2J2-202ENST00000358438 TRGV11A0A075B6L2 103 aa16.16■□□□□ 0.18
POLR2J2-202ENST00000358438 INSP01308 110 aa16.14■□□□□ 0.17
POLR2J2-202ENST00000358438 HTN1P15515 57 aa16.14■□□□□ 0.17
POLR2J2-202ENST00000358438 C19orf73Q9NVV2 129 aa16.14■□□□□ 0.17
POLR2J2-202ENST00000358438 ATP5G1P05496 136 aa16.14■□□□□ 0.17
POLR2J2-202ENST00000358438 F5H697 171 aa16.13■□□□□ 0.17
POLR2J2-202ENST00000358438 C20orf203Q8NBC4 194 aa16.13■□□□□ 0.17
POLR2J2-202ENST00000358438 CHCHD5Q9BSY4 110 aa16.12■□□□□ 0.17
POLR2J2-202ENST00000358438 WFDC10AQ9H1F0 79 aa16.12■□□□□ 0.17
POLR2J2-202ENST00000358438 XCL2Q9UBD3 114 aa16.12■□□□□ 0.17
POLR2J2-202ENST00000358438 FBN1P35555 2871 aaKnown RBP16.12■□□□□ 0.17
POLR2J2-202ENST00000358438 IGHV3-30-3P0DP02 117 aa16.11■□□□□ 0.17
POLR2J2-202ENST00000358438 MIAQ16674 131 aa16.11■□□□□ 0.17
POLR2J2-202ENST00000358438 SPATA3Q8NHX4 192 aa16.11■□□□□ 0.17
POLR2J2-202ENST00000358438 TIMM21Q9BVV7 248 aa16.1■□□□□ 0.17
POLR2J2-202ENST00000358438 KRTAP24-1Q3LI83 254 aa16.1■□□□□ 0.17
POLR2J2-202ENST00000358438 DNAJC30Q96LL9 226 aa16.1■□□□□ 0.17
POLR2J2-202ENST00000358438 LINC00467Q9BRT7 94 aa16.1■□□□□ 0.17
POLR2J2-202ENST00000358438 JPT2Q9H910 190 aa16.1■□□□□ 0.17
POLR2J2-202ENST00000358438 IGLV4-3A0A075B6K6 122 aa16.09■□□□□ 0.17
POLR2J2-202ENST00000358438 M0QY20 66 aa16.09■□□□□ 0.17
POLR2J2-202ENST00000358438 TIMM17BO60830 172 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms