RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 M0R2N4 97 aa10.08□□□□□ -0.8
CCNE1-202ENST00000357943 UBE2L6O14933 153 aa10.08□□□□□ -0.8
CCNE1-202ENST00000357943 Q8N976 141 aa10.08□□□□□ -0.8
CCNE1-202ENST00000357943 KRTAP1-5Q9BYS1 174 aa10.08□□□□□ -0.8
CCNE1-202ENST00000357943 AP5S1Q9NUS5 200 aa10.08□□□□□ -0.8
CCNE1-202ENST00000357943 NBDYA0A0U1RRE5 68 aa10.07□□□□□ -0.8
CCNE1-202ENST00000357943 LINC01546A6NGU7 62 aa10.07□□□□□ -0.8
CCNE1-202ENST00000357943 CDPF1Q6NVV7 123 aa10.07□□□□□ -0.8
CCNE1-202ENST00000357943 FRAS1Q86XX4 4008 aa10.07□□□□□ -0.8
CCNE1-202ENST00000357943 RBX1P62877 108 aa10.07□□□□□ -0.8
CCNE1-202ENST00000357943 LAGE3Q14657 143 aa10.07□□□□□ -0.8
CCNE1-202ENST00000357943 C20orf203Q8NBC4 194 aa10.07□□□□□ -0.8
CCNE1-202ENST00000357943 PRO1933Q9H354 126 aa10.07□□□□□ -0.8
CCNE1-202ENST00000357943 K7EMI3 77 aa10.06□□□□□ -0.8
CCNE1-202ENST00000357943 M0R143 59 aa10.06□□□□□ -0.8
CCNE1-202ENST00000357943 RPL39P62891 51 aaKnown RBP10.06□□□□□ -0.8
CCNE1-202ENST00000357943 PMCHL1Q16048 86 aa10.06□□□□□ -0.8
CCNE1-202ENST00000357943 DNAH17Q9UFH2 4485 aa10.06□□□□□ -0.8
CCNE1-202ENST00000357943 IGLV4-60A0A075B6I1 120 aa10.05□□□□□ -0.8
CCNE1-202ENST00000357943 H7C423 109 aa10.05□□□□□ -0.8
CCNE1-202ENST00000357943 FGF6P10767 208 aa10.05□□□□□ -0.8
CCNE1-202ENST00000357943 ORMDL2Q53FV1 153 aa10.05□□□□□ -0.8
CCNE1-202ENST00000357943 A0A1B0GUV1 79 aa10.04□□□□□ -0.8
CCNE1-202ENST00000357943 A0A1B0GV90 55 aa10.04□□□□□ -0.8
CCNE1-202ENST00000357943 SCGB1D1O95968 90 aa10.04□□□□□ -0.8
CCNE1-202ENST00000357943 Q6ZR54 194 aa10.04□□□□□ -0.8
CCNE1-202ENST00000357943 TRAV9-2A0A087WT02 112 aa10.04□□□□□ -0.8
CCNE1-202ENST00000357943 TTC32Q5I0X7 151 aa10.04□□□□□ -0.8
CCNE1-202ENST00000357943 AMMECR1LQ6DCA0 310 aa10.04□□□□□ -0.8
CCNE1-202ENST00000357943 KLK12Q9UKR0 248 aa10.04□□□□□ -0.8
CCNE1-202ENST00000357943 UBE2D4Q9Y2X8 147 aa10.04□□□□□ -0.8
CCNE1-202ENST00000357943 A0A096LNJ9 63 aa10.03□□□□□ -0.8
CCNE1-202ENST00000357943 ANGP03950 147 aaKnown RBP10.03□□□□□ -0.8
CCNE1-202ENST00000357943 BTF3P20290 206 aaKnown RBP10.03□□□□□ -0.8
CCNE1-202ENST00000357943 C2orf66Q6UXQ4 117 aa10.03□□□□□ -0.8
CCNE1-202ENST00000357943 C10orf126Q8N4M7 172 aa10.03□□□□□ -0.8
CCNE1-202ENST00000357943 FAT2Q9NYQ8 4349 aa10.03□□□□□ -0.8
CCNE1-202ENST00000357943 K7EP13 123 aa10.02□□□□□ -0.81
CCNE1-202ENST00000357943 IBA57-AS1B1ANH7 110 aa10.01□□□□□ -0.81
CCNE1-202ENST00000357943 ZNF25P17030 456 aaPredicted RBP10.01□□□□□ -0.81
CCNE1-202ENST00000357943 LINC00269Q8N2A0 174 aa10.01□□□□□ -0.81
CCNE1-202ENST00000357943 CYSLTR1Q9Y271 337 aa10.01□□□□□ -0.81
CCNE1-202ENST00000357943 LEPROTL1O95214 131 aa10□□□□□ -0.81
CCNE1-202ENST00000357943 CLPSL2Q6UWE3 100 aa10□□□□□ -0.81
CCNE1-202ENST00000357943 UBE2WQ96B02 151 aa10□□□□□ -0.81
CCNE1-202ENST00000357943 TMEM101Q96IK0 257 aa10□□□□□ -0.81
CCNE1-202ENST00000357943 HBDP02042 147 aa10□□□□□ -0.81
CCNE1-202ENST00000357943 DGAT2L7PQ6IED9 249 aa10□□□□□ -0.81
CCNE1-202ENST00000357943 ENHOQ6UWT2 76 aa10□□□□□ -0.81
CCNE1-202ENST00000357943 OR5A1Q8NGJ0 315 aa10□□□□□ -0.81
CCNE1-202ENST00000357943 FAM104AQ969W3 186 aa10□□□□□ -0.81
CCNE1-202ENST00000357943 TOMM6Q96B49 74 aa10□□□□□ -0.81
CCNE1-202ENST00000357943 CDC42SE2Q9NRR3 84 aa10□□□□□ -0.81
CCNE1-202ENST00000357943 CSDC2Q9Y534 153 aaKnown RBP10□□□□□ -0.81
CCNE1-202ENST00000357943 C3orf79P0CE67 100 aa9.99□□□□□ -0.81
CCNE1-202ENST00000357943 TEX43Q6ZNM6 134 aa9.99□□□□□ -0.81
CCNE1-202ENST00000357943 LINC00173Q6ZV60 143 aa9.99□□□□□ -0.81
CCNE1-202ENST00000357943 OPRPNQ99935 248 aaPredicted RBP9.99□□□□□ -0.81
CCNE1-202ENST00000357943 MIEN1Q9BRT3 115 aa9.99□□□□□ -0.81
CCNE1-202ENST00000357943 TIMM21Q9BVV7 248 aa9.99□□□□□ -0.81
CCNE1-202ENST00000357943 Q9HAA7 133 aa9.99□□□□□ -0.81
CCNE1-202ENST00000357943 PRR34Q9NV39 138 aa9.99□□□□□ -0.81
CCNE1-202ENST00000357943 KRTDAPP60985 99 aa9.98□□□□□ -0.81
CCNE1-202ENST00000357943 REG3AQ06141 175 aa9.98□□□□□ -0.81
CCNE1-202ENST00000357943 SMAGPQ0VAQ4 97 aa9.98□□□□□ -0.81
CCNE1-202ENST00000357943 RNASE13Q5GAN3 156 aaKnown RBP9.98□□□□□ -0.81
CCNE1-202ENST00000357943 Q6ZUT4 128 aa9.98□□□□□ -0.81
CCNE1-202ENST00000357943 SPANXA1Q9NS26 97 aa9.98□□□□□ -0.81
CCNE1-202ENST00000357943 HSPB8Q9UJY1 196 aa9.98□□□□□ -0.81
CCNE1-202ENST00000357943 IGIPA6NJ69 53 aa9.97□□□□□ -0.81
CCNE1-202ENST00000357943 CRPP02741 224 aa9.97□□□□□ -0.81
CCNE1-202ENST00000357943 G0S2P27469 103 aa9.97□□□□□ -0.81
CCNE1-202ENST00000357943 PYGO1Q9Y3Y4 419 aa9.97□□□□□ -0.81
CCNE1-202ENST00000357943 IGKV3OR2-268A0A0C4DH90 116 aa9.96□□□□□ -0.81
CCNE1-202ENST00000357943 C6orf223Q8N319 242 aa9.96□□□□□ -0.81
CCNE1-202ENST00000357943 IGLV4-3A0A075B6K6 122 aa9.96□□□□□ -0.82
CCNE1-202ENST00000357943 TRAV8-3A0A0A6YYJ7 113 aa9.96□□□□□ -0.82
CCNE1-202ENST00000357943 MRPS36P82909 103 aaKnown RBP9.95□□□□□ -0.82
CCNE1-202ENST00000357943 C1orf134Q5TEV5 83 aa9.95□□□□□ -0.82
CCNE1-202ENST00000357943 SCGB3A1Q96QR1 104 aa9.95□□□□□ -0.82
CCNE1-202ENST00000357943 VAMP8Q9BV40 100 aa9.95□□□□□ -0.82
CCNE1-202ENST00000357943 SNHG12Q9BXW3 62 aa9.95□□□□□ -0.82
CCNE1-202ENST00000357943 DNAH11Q96DT5 4516 aa9.95□□□□□ -0.82
CCNE1-202ENST00000357943 ERASQ7Z444 233 aa9.94□□□□□ -0.82
CCNE1-202ENST00000357943 TIMM17AQ99595 171 aa9.94□□□□□ -0.82
CCNE1-202ENST00000357943 MAP1LC3CQ9BXW4 147 aa9.94□□□□□ -0.82
CCNE1-202ENST00000357943 IGLV10-54A0A075B6I4 117 aa9.93□□□□□ -0.82
CCNE1-202ENST00000357943 C20orf202A1L168 122 aa9.93□□□□□ -0.82
CCNE1-202ENST00000357943 SYS1-DBNDD2H3BUS1 97 aa9.93□□□□□ -0.82
CCNE1-202ENST00000357943 MIAQ16674 131 aa9.93□□□□□ -0.82
CCNE1-202ENST00000357943 ZC2HC1BQ5TFG8 222 aa9.93□□□□□ -0.82
CCNE1-202ENST00000357943 Q6ZRN7 208 aaPredicted RBP9.93□□□□□ -0.82
CCNE1-202ENST00000357943 TMEM141Q96I45 108 aa9.93□□□□□ -0.82
CCNE1-202ENST00000357943 IGKV2D-24A0A075B6R9 120 aa9.93□□□□□ -0.82
CCNE1-202ENST00000357943 LINC01549A6NIU2 74 aa9.93□□□□□ -0.82
CCNE1-202ENST00000357943 SPATA12Q7Z6I5 190 aa9.93□□□□□ -0.82
CCNE1-202ENST00000357943 IFI27L1Q96BM0 104 aa9.93□□□□□ -0.82
CCNE1-202ENST00000357943 LINC00959A0A1B0GUT2 108 aa9.92□□□□□ -0.82
CCNE1-202ENST00000357943 RTL8CO15255 209 aa9.92□□□□□ -0.82
CCNE1-202ENST00000357943 NFE4Q86UQ8 179 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms