RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 CHCHD5Q9BSY4 110 aa7.78□□□□□ -1.16
CAPN3-205ENST00000357568 KRTAP1-1Q07627 177 aa7.78□□□□□ -1.16
CAPN3-205ENST00000357568 MAPK1IP1LQ8NDC0 245 aa7.78□□□□□ -1.16
CAPN3-205ENST00000357568 LINC00526Q96FQ7 95 aa7.78□□□□□ -1.16
CAPN3-205ENST00000357568 AKAP6Q13023 2319 aa7.78□□□□□ -1.16
CAPN3-205ENST00000357568 TRAV8-3A0A0A6YYJ7 113 aa7.77□□□□□ -1.16
CAPN3-205ENST00000357568 A0A1B0GX51 115 aa7.77□□□□□ -1.16
CAPN3-205ENST00000357568 SNRPD3P62318 126 aaKnown RBP7.77□□□□□ -1.16
CAPN3-205ENST00000357568 AKAP9Q99996 3911 aa7.77□□□□□ -1.17
CAPN3-205ENST00000357568 FAM236AA0A1B0GUQ0 79 aa7.77□□□□□ -1.17
CAPN3-205ENST00000357568 FAM236BA0A1B0GV22 79 aa7.77□□□□□ -1.17
CAPN3-205ENST00000357568 FAM19A3Q7Z5A8 133 aa7.77□□□□□ -1.17
CAPN3-205ENST00000357568 C5orf38Q86SI9 138 aa7.77□□□□□ -1.17
CAPN3-205ENST00000357568 TMEM219Q86XT9 240 aa7.77□□□□□ -1.17
CAPN3-205ENST00000357568 UBE2D4Q9Y2X8 147 aa7.77□□□□□ -1.17
CAPN3-205ENST00000357568 CFHR3Q02985 330 aa7.76□□□□□ -1.17
CAPN3-205ENST00000357568 ABCA12Q86UK0 2595 aa7.76□□□□□ -1.17
CAPN3-205ENST00000357568 TMEM89A2RUT3 159 aa7.76□□□□□ -1.17
CAPN3-205ENST00000357568 A6NDX4 124 aa7.76□□□□□ -1.17
CAPN3-205ENST00000357568 ADARB2-AS1A8MUL3 147 aa7.76□□□□□ -1.17
CAPN3-205ENST00000357568 K7EQG2 157 aa7.76□□□□□ -1.17
CAPN3-205ENST00000357568 NDUFA7O95182 113 aa7.76□□□□□ -1.17
CAPN3-205ENST00000357568 INAFM2P0DMQ5 153 aa7.76□□□□□ -1.17
CAPN3-205ENST00000357568 CHCHD7Q9BUK0 85 aa7.76□□□□□ -1.17
CAPN3-205ENST00000357568 NAV2Q8IVL1 2488 aa7.76□□□□□ -1.17
CAPN3-205ENST00000357568 SPG11Q96JI7 2443 aa7.76□□□□□ -1.17
CAPN3-205ENST00000357568 IGLV5-39A0A0G2JS06 123 aa7.75□□□□□ -1.17
CAPN3-205ENST00000357568 ZNF415Q09FC8 603 aa7.75□□□□□ -1.17
CAPN3-205ENST00000357568 DEFB104AQ8WTQ1 72 aa7.75□□□□□ -1.17
CAPN3-205ENST00000357568 WNK2Q9Y3S1 2297 aa7.75□□□□□ -1.17
CAPN3-205ENST00000357568 LY6G6DO95868 133 aa7.75□□□□□ -1.17
CAPN3-205ENST00000357568 LINC00308Q8TCZ7 52 aa7.75□□□□□ -1.17
CAPN3-205ENST00000357568 A8MTW9 85 aa7.75□□□□□ -1.17
CAPN3-205ENST00000357568 BEAN1Q3B7T3 259 aa7.75□□□□□ -1.17
CAPN3-205ENST00000357568 C9orf153Q5TBE3 101 aa7.75□□□□□ -1.17
CAPN3-205ENST00000357568 LINC00527Q9UJ94 153 aa7.75□□□□□ -1.17
CAPN3-205ENST00000357568 IGHV3-11P01762 117 aa7.74□□□□□ -1.17
CAPN3-205ENST00000357568 HIST1H4AP62805 103 aaKnown RBP7.74□□□□□ -1.17
CAPN3-205ENST00000357568 OVOL2Q9BRP0 275 aa7.74□□□□□ -1.17
CAPN3-205ENST00000357568 ITPR2Q14571 2701 aa7.74□□□□□ -1.17
CAPN3-205ENST00000357568 RPS28P62857 69 aaKnown RBP7.74□□□□□ -1.17
CAPN3-205ENST00000357568 IGKV3-7A0A075B6H7 116 aa7.73□□□□□ -1.17
CAPN3-205ENST00000357568 F5H768 121 aa7.73□□□□□ -1.17
CAPN3-205ENST00000357568 FSHBP01225 129 aa7.73□□□□□ -1.17
CAPN3-205ENST00000357568 LINC00467Q9BRT7 94 aa7.73□□□□□ -1.17
CAPN3-205ENST00000357568 CENPEQ02224 2701 aa7.73□□□□□ -1.17
CAPN3-205ENST00000357568 CRYGAP11844 174 aa7.73□□□□□ -1.17
CAPN3-205ENST00000357568 HERVK_113P63121 156 aa7.73□□□□□ -1.17
CAPN3-205ENST00000357568 COX7CP15954 63 aa7.72□□□□□ -1.17
CAPN3-205ENST00000357568 SMCR5Q8TEV8 140 aa7.72□□□□□ -1.17
CAPN3-205ENST00000357568 POLQO75417 2590 aa7.72□□□□□ -1.17
CAPN3-205ENST00000357568 ATOX1O00244 68 aa7.72□□□□□ -1.17
CAPN3-205ENST00000357568 Q6ZSV7 163 aa7.72□□□□□ -1.17
CAPN3-205ENST00000357568 ABCA2Q9BZC7 2435 aa7.72□□□□□ -1.17
CAPN3-205ENST00000357568 J3KT08 172 aa7.71□□□□□ -1.17
CAPN3-205ENST00000357568 TRAV12-2A0A075B6T6 113 aa7.71□□□□□ -1.18
CAPN3-205ENST00000357568 DAZ2Q13117 558 aaKnown RBP7.71□□□□□ -1.18
CAPN3-205ENST00000357568 SPINK13Q1W4C9 94 aa7.71□□□□□ -1.18
CAPN3-205ENST00000357568 DAZ4Q86SG3 579 aaKnown RBP7.71□□□□□ -1.18
CAPN3-205ENST00000357568 DUX5Q96PT3 197 aa7.71□□□□□ -1.18
CAPN3-205ENST00000357568 DAZ3Q9NR90 486 aaKnown RBP7.71□□□□□ -1.18
CAPN3-205ENST00000357568 AVPP01185 164 aa7.7□□□□□ -1.18
CAPN3-205ENST00000357568 SMR3AQ99954 134 aa7.7□□□□□ -1.18
CAPN3-205ENST00000357568 CDKN2A-AS1Q9UH64 79 aa7.7□□□□□ -1.18
CAPN3-205ENST00000357568 TACC2O95359 2948 aa7.7□□□□□ -1.18
CAPN3-205ENST00000357568 IGHV3-53P01767 116 aa7.7□□□□□ -1.18
CAPN3-205ENST00000357568 BAALC-AS2P0C853 105 aa7.7□□□□□ -1.18
CAPN3-205ENST00000357568 OR13C6PQ8NH95 151 aa7.7□□□□□ -1.18
CAPN3-205ENST00000357568 CSMD2Q7Z408 3487 aa7.69□□□□□ -1.18
CAPN3-205ENST00000357568 PSMB8P28062 276 aa7.69□□□□□ -1.18
CAPN3-205ENST00000357568 NPC2P61916 151 aa7.69□□□□□ -1.18
CAPN3-205ENST00000357568 CEMP1Q6PRD7 247 aaPredicted RBP7.69□□□□□ -1.18
CAPN3-205ENST00000357568 LINC00528Q8N1L1 170 aa7.69□□□□□ -1.18
CAPN3-205ENST00000357568 C2orf48Q96LS8 159 aa7.69□□□□□ -1.18
CAPN3-205ENST00000357568 C22orf24Q9Y442 160 aa7.69□□□□□ -1.18
CAPN3-205ENST00000357568 TRAV13-2A0A0B4J235 113 aa7.68□□□□□ -1.18
CAPN3-205ENST00000357568 RPL28P46779 137 aaKnown RBP7.68□□□□□ -1.18
CAPN3-205ENST00000357568 ZNF625Q96I27 306 aaPredicted RBP7.68□□□□□ -1.18
CAPN3-205ENST00000357568 Q9H8V8 135 aa7.68□□□□□ -1.18
CAPN3-205ENST00000357568 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.68□□□□□ -1.186e-8■■■■□ 22
CAPN3-205ENST00000357568 A8MZ25 164 aa7.68□□□□□ -1.18
CAPN3-205ENST00000357568 KLK5Q9Y337 293 aaPredicted RBP7.68□□□□□ -1.18
CAPN3-205ENST00000357568 H3BUX3 64 aa7.67□□□□□ -1.18
CAPN3-205ENST00000357568 HIST2H2BDQ6DRA6 164 aa7.67□□□□□ -1.18
CAPN3-205ENST00000357568 F8WDY8 70 aa7.67□□□□□ -1.18
CAPN3-205ENST00000357568 IGHV4-38-2P0DP08 117 aa7.67□□□□□ -1.18
CAPN3-205ENST00000357568 EDN2P20800 178 aa7.67□□□□□ -1.18
CAPN3-205ENST00000357568 Q6JHZ5 121 aa7.67□□□□□ -1.18
CAPN3-205ENST00000357568 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.66□□□□□ -1.18
CAPN3-205ENST00000357568 IGKV2-29A2NJV5 120 aaPredicted RBP7.66□□□□□ -1.18
CAPN3-205ENST00000357568 RS1O15537 224 aa7.66□□□□□ -1.18
CAPN3-205ENST00000357568 ITPR3Q14573 2671 aa7.66□□□□□ -1.18
CAPN3-205ENST00000357568 MYO9AB2RTY4 2548 aa7.66□□□□□ -1.18
CAPN3-205ENST00000357568 FLNBO75369 2602 aaKnown RBP7.66□□□□□ -1.18
CAPN3-205ENST00000357568 IGHV3OR16-10A0A075B7F0 116 aa7.66□□□□□ -1.18
CAPN3-205ENST00000357568 SMIM1B2RUZ4 78 aa7.66□□□□□ -1.18
CAPN3-205ENST00000357568 MALP21145 153 aa7.66□□□□□ -1.18
CAPN3-205ENST00000357568 RNASE13Q5GAN3 156 aaKnown RBP7.66□□□□□ -1.18
CAPN3-205ENST00000357568 LINC00242Q5T6M2 205 aa7.66□□□□□ -1.18
CAPN3-205ENST00000357568 SOSTDC1Q6X4U4 206 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms