RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 IGIPA6NJ69 53 aa17.11■□□□□ 0.33
SSBP3-202ENST00000357475 HBDP02042 147 aa17.11■□□□□ 0.33
SSBP3-202ENST00000357475 OR5A1Q8NGJ0 315 aa17.11■□□□□ 0.33
SSBP3-202ENST00000357475 TIMM21Q9BVV7 248 aa17.11■□□□□ 0.33
SSBP3-202ENST00000357475 ZNF25P17030 456 aaPredicted RBP17.11■□□□□ 0.33
SSBP3-202ENST00000357475 COA6Q5JTJ3 125 aaKnown RBP17.11■□□□□ 0.33
SSBP3-202ENST00000357475 LINC00269Q8N2A0 174 aa17.11■□□□□ 0.33
SSBP3-202ENST00000357475 CDC42SE2Q9NRR3 84 aa17.11■□□□□ 0.33
SSBP3-202ENST00000357475 SPANXA1Q9NS26 97 aa17.1■□□□□ 0.33
SSBP3-202ENST00000357475 CSDC2Q9Y534 153 aaKnown RBP17.1■□□□□ 0.33
SSBP3-202ENST00000357475 DGAT2L7PQ6IED9 249 aa17.09■□□□□ 0.33
SSBP3-202ENST00000357475 Q6ZR54 194 aa17.09■□□□□ 0.33
SSBP3-202ENST00000357475 TMEM101Q96IK0 257 aa17.09■□□□□ 0.33
SSBP3-202ENST00000357475 IGLV4-3A0A075B6K6 122 aa17.08■□□□□ 0.32
SSBP3-202ENST00000357475 PDZD11Q5EBL8 140 aa17.08■□□□□ 0.32
SSBP3-202ENST00000357475 ZC2HC1BQ5TFG8 222 aa17.08■□□□□ 0.32
SSBP3-202ENST00000357475 ENHOQ6UWT2 76 aa17.08■□□□□ 0.32
SSBP3-202ENST00000357475 SCGB3A1Q96QR1 104 aa17.08■□□□□ 0.32
SSBP3-202ENST00000357475 PYGO1Q9Y3Y4 419 aa17.08■□□□□ 0.32
SSBP3-202ENST00000357475 IBA57-AS1B1ANH7 110 aa17.07■□□□□ 0.32
SSBP3-202ENST00000357475 LINC00173Q6ZV60 143 aa17.07■□□□□ 0.32
SSBP3-202ENST00000357475 ZNF664Q8N3J9 261 aa17.07■□□□□ 0.32
SSBP3-202ENST00000357475 G0S2P27469 103 aa17.06■□□□□ 0.32
SSBP3-202ENST00000357475 UBE2WQ96B02 151 aa17.06■□□□□ 0.32
SSBP3-202ENST00000357475 TRAV9-2A0A087WT02 112 aa17.06■□□□□ 0.32
SSBP3-202ENST00000357475 IGKV3OR2-268A0A0C4DH90 116 aa17.06■□□□□ 0.32
SSBP3-202ENST00000357475 ERASQ7Z444 233 aa17.06■□□□□ 0.32
SSBP3-202ENST00000357475 PRR34Q9NV39 138 aa17.06■□□□□ 0.32
SSBP3-202ENST00000357475 REG3AQ06141 175 aa17.05■□□□□ 0.32
SSBP3-202ENST00000357475 TTC32Q5I0X7 151 aa17.05■□□□□ 0.32
SSBP3-202ENST00000357475 C10orf126Q8N4M7 172 aa17.05■□□□□ 0.32
SSBP3-202ENST00000357475 Q9HAA7 133 aa17.05■□□□□ 0.32
SSBP3-202ENST00000357475 RYR3Q15413 4870 aa17.04■□□□□ 0.32
SSBP3-202ENST00000357475 MRPS36P82909 103 aaKnown RBP17.04■□□□□ 0.32
SSBP3-202ENST00000357475 TIMM17AQ99595 171 aa17.04■□□□□ 0.32
SSBP3-202ENST00000357475 SMAGPQ0VAQ4 97 aa17.03■□□□□ 0.32
SSBP3-202ENST00000357475 TMA7Q9Y2S6 64 aaKnown RBP17.03■□□□□ 0.32
SSBP3-202ENST00000357475 TMEM141Q96I45 108 aa17.02■□□□□ 0.32
SSBP3-202ENST00000357475 K7EP13 123 aa17.01■□□□□ 0.31
SSBP3-202ENST00000357475 FABP4P15090 132 aa17.01■□□□□ 0.31
SSBP3-202ENST00000357475 CRPP02741 224 aa17■□□□□ 0.31
SSBP3-202ENST00000357475 IGLV10-54A0A075B6I4 117 aa16.99■□□□□ 0.31
SSBP3-202ENST00000357475 BAALCQ8WXS3 180 aa16.99■□□□□ 0.31
SSBP3-202ENST00000357475 AMELXQ99217 191 aa16.99■□□□□ 0.31
SSBP3-202ENST00000357475 LINC01549A6NIU2 74 aa16.98■□□□□ 0.31
SSBP3-202ENST00000357475 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.98■□□□□ 0.31
SSBP3-202ENST00000357475 S100A6P06703 90 aa16.98■□□□□ 0.31
SSBP3-202ENST00000357475 TRAV13-1A0A0B4J241 112 aa16.97■□□□□ 0.31
SSBP3-202ENST00000357475 LINC00959A0A1B0GUT2 108 aa16.97■□□□□ 0.31
SSBP3-202ENST00000357475 LEPROTL1O95214 131 aa16.97■□□□□ 0.31
SSBP3-202ENST00000357475 SNRPEP62304 92 aaKnown RBP16.97■□□□□ 0.31
SSBP3-202ENST00000357475 FRAS1Q86XX4 4008 aa16.97■□□□□ 0.31
SSBP3-202ENST00000357475 TEX43Q6ZNM6 134 aa16.96■□□□□ 0.31
SSBP3-202ENST00000357475 HIST3H2BBQ8N257 126 aa16.96■□□□□ 0.31
SSBP3-202ENST00000357475 VCX2Q9H322 139 aa16.96■□□□□ 0.31
SSBP3-202ENST00000357475 DNAH17Q9UFH2 4485 aa16.96■□□□□ 0.31
SSBP3-202ENST00000357475 IFITM10A6NMD0 228 aa16.96■□□□□ 0.3
SSBP3-202ENST00000357475 ATP5LO75964 103 aa16.96■□□□□ 0.3
SSBP3-202ENST00000357475 NPSP0C0P6 89 aa16.96■□□□□ 0.3
SSBP3-202ENST00000357475 Q6ZN92 141 aa16.96■□□□□ 0.3
SSBP3-202ENST00000357475 IFI27L1Q96BM0 104 aa16.96■□□□□ 0.3
SSBP3-202ENST00000357475 TRAV8-3A0A0A6YYJ7 113 aa16.95■□□□□ 0.3
SSBP3-202ENST00000357475 PRSS29PA6NIE9 313 aa16.95■□□□□ 0.3
SSBP3-202ENST00000357475 MIAQ16674 131 aa16.95■□□□□ 0.3
SSBP3-202ENST00000357475 IGKV2D-24A0A075B6R9 120 aa16.93■□□□□ 0.3
SSBP3-202ENST00000357475 KRTAP26-1Q6PEX3 210 aa16.93■□□□□ 0.3
SSBP3-202ENST00000357475 Q6ZRN7 208 aaPredicted RBP16.93■□□□□ 0.3
SSBP3-202ENST00000357475 C6orf223Q8N319 242 aa16.93■□□□□ 0.3
SSBP3-202ENST00000357475 CST9LQ9H4G1 147 aa16.93■□□□□ 0.3
SSBP3-202ENST00000357475 C5orf52A6NGY3 159 aa16.92■□□□□ 0.3
SSBP3-202ENST00000357475 UBE2D1P51668 147 aa16.91■□□□□ 0.3
SSBP3-202ENST00000357475 CHCHD10Q8WYQ3 142 aaPredicted RBP16.91■□□□□ 0.3
SSBP3-202ENST00000357475 CCL25O15444 150 aa16.91■□□□□ 0.3
SSBP3-202ENST00000357475 PMVKQ15126 192 aa16.91■□□□□ 0.3
SSBP3-202ENST00000357475 PAPPA-AS1Q5QFB9 102 aa16.91■□□□□ 0.3
SSBP3-202ENST00000357475 C1orf134Q5TEV5 83 aa16.91■□□□□ 0.3
SSBP3-202ENST00000357475 HSPB8Q9UJY1 196 aa16.91■□□□□ 0.3
SSBP3-202ENST00000357475 PRSS1P07477 247 aa16.9■□□□□ 0.3
SSBP3-202ENST00000357475 XCL1P47992 114 aa16.9■□□□□ 0.3
SSBP3-202ENST00000357475 MAPKAPK5-AS1Q8N8E1 139 aa16.9■□□□□ 0.3
SSBP3-202ENST00000357475 C2orf88Q9BSF0 95 aa16.9■□□□□ 0.3
SSBP3-202ENST00000357475 C1orf43Q9BWL3 253 aa16.9■□□□□ 0.3
SSBP3-202ENST00000357475 H0Y8G0 127 aa16.89■□□□□ 0.29
SSBP3-202ENST00000357475 TRAV8-4A0A0B4J246 113 aa16.88■□□□□ 0.29
SSBP3-202ENST00000357475 COX6A2Q02221 97 aa16.88■□□□□ 0.29
SSBP3-202ENST00000357475 SS18Q15532 418 aa16.88■□□□□ 0.29
SSBP3-202ENST00000357475 LINC00242Q5T6M2 205 aa16.88■□□□□ 0.29
SSBP3-202ENST00000357475 HIST1H2BLQ99880 126 aa16.88■□□□□ 0.29
SSBP3-202ENST00000357475 GAGE12HA6NDE8 117 aa16.87■□□□□ 0.29
SSBP3-202ENST00000357475 FAT2Q9NYQ8 4349 aa16.87■□□□□ 0.29
SSBP3-202ENST00000357475 A0A0J9YXV3 536 aa16.86■□□□□ 0.29
SSBP3-202ENST00000357475 RTL8CO15255 209 aa16.86■□□□□ 0.29
SSBP3-202ENST00000357475 SPATA12Q7Z6I5 190 aa16.86■□□□□ 0.29
SSBP3-202ENST00000357475 S100A2P29034 98 aa16.85■□□□□ 0.29
SSBP3-202ENST00000357475 FOXI1Q12951 378 aa16.85■□□□□ 0.29
SSBP3-202ENST00000357475 NFE4Q86UQ8 179 aa16.85■□□□□ 0.29
SSBP3-202ENST00000357475 PACRGQ96M98 296 aaPredicted RBP16.85■□□□□ 0.29
SSBP3-202ENST00000357475 RMI2Q96E14 147 aa16.84■□□□□ 0.29
SSBP3-202ENST00000357475 IGLV4-69A0A075B6H9 119 aa16.83■□□□□ 0.28
SSBP3-202ENST00000357475 TRAV12-1A0A0B4J245 112 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms