RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 TIMM21Q9BVV7 248 aa6.07□□□□□ -1.44
CDC42SE1-201ENST00000357235 IGHV1OR15-1A0A075B7D0 117 aa6.06□□□□□ -1.44
CDC42SE1-201ENST00000357235 TINCRA0A1B0GVN0 87 aa6.06□□□□□ -1.44
CDC42SE1-201ENST00000357235 NXPH4O95158 308 aa6.06□□□□□ -1.44
CDC42SE1-201ENST00000357235 PRB1P04280 392 aa6.06□□□□□ -1.44
CDC42SE1-201ENST00000357235 IGHV3-30-3P0DP02 117 aa6.06□□□□□ -1.44
CDC42SE1-201ENST00000357235 KLK9Q2XQG4 91 aa6.06□□□□□ -1.44
CDC42SE1-201ENST00000357235 C20orf203Q8NBC4 194 aa6.06□□□□□ -1.44
CDC42SE1-201ENST00000357235 PEMTQ9UBM1 199 aa6.06□□□□□ -1.44
CDC42SE1-201ENST00000357235 CENPEQ02224 2701 aa6.06□□□□□ -1.44
CDC42SE1-201ENST00000357235 MYO9AB2RTY4 2548 aa6.06□□□□□ -1.44
CDC42SE1-201ENST00000357235 USP9XQ93008 2570 aaPredicted RBP6.06□□□□□ -1.44
CDC42SE1-201ENST00000357235 IGLV4-3A0A075B6K6 122 aa6.06□□□□□ -1.44
CDC42SE1-201ENST00000357235 IGHV3-38A0A0C4DH36 116 aa6.06□□□□□ -1.44
CDC42SE1-201ENST00000357235 A0A0J9YXY3 114 aa6.06□□□□□ -1.44
CDC42SE1-201ENST00000357235 BBC3Q96PG8 261 aaPredicted RBP6.06□□□□□ -1.44
CDC42SE1-201ENST00000357235 Q9UF83 564 aa6.06□□□□□ -1.44
CDC42SE1-201ENST00000357235 NSUN5P1Q3KNT7 163 aa6.05□□□□□ -1.44
CDC42SE1-201ENST00000357235 APRG1Q8IVJ8 170 aa6.05□□□□□ -1.44
CDC42SE1-201ENST00000357235 SERP2Q8N6R1 65 aa6.05□□□□□ -1.44
CDC42SE1-201ENST00000357235 ZNF625Q96I27 306 aaPredicted RBP6.05□□□□□ -1.44
CDC42SE1-201ENST00000357235 CHD6Q8TD26 2715 aa6.05□□□□□ -1.44
CDC42SE1-201ENST00000357235 WNK1Q9H4A3 2382 aa6.05□□□□□ -1.44
CDC42SE1-201ENST00000357235 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.04□□□□□ -1.44
CDC42SE1-201ENST00000357235 IGKV2-29A2NJV5 120 aaPredicted RBP6.04□□□□□ -1.44
CDC42SE1-201ENST00000357235 HIST1H4AP62805 103 aaKnown RBP6.04□□□□□ -1.44
CDC42SE1-201ENST00000357235 RPL18AQ02543 176 aaKnown RBP6.04□□□□□ -1.44
CDC42SE1-201ENST00000357235 NDUFA12Q9UI09 145 aa6.04□□□□□ -1.44
CDC42SE1-201ENST00000357235 PKIGQ9Y2B9 76 aa6.04□□□□□ -1.44
CDC42SE1-201ENST00000357235 A0A0J9YX75 114 aa6.04□□□□□ -1.44
CDC42SE1-201ENST00000357235 RPL35AP18077 110 aaKnown RBP6.04□□□□□ -1.44
CDC42SE1-201ENST00000357235 PFN2P35080 140 aa6.04□□□□□ -1.44
CDC42SE1-201ENST00000357235 MAPK1IP1LQ8NDC0 245 aa6.04□□□□□ -1.44
CDC42SE1-201ENST00000357235 C10orf105Q8TEF2 133 aa6.04□□□□□ -1.44
CDC42SE1-201ENST00000357235 TLN2Q9Y4G6 2542 aa6.04□□□□□ -1.44
CDC42SE1-201ENST00000357235 SETD2Q9BYW2 2564 aaPredicted RBP6.04□□□□□ -1.44
CDC42SE1-201ENST00000357235 TRBV6-5A0A0K0K1A5 114 aa6.04□□□□□ -1.44
CDC42SE1-201ENST00000357235 IGHV4-59P01825 116 aa6.04□□□□□ -1.44
CDC42SE1-201ENST00000357235 SEC61GP60059 68 aa6.04□□□□□ -1.44
CDC42SE1-201ENST00000357235 ADAMTSL4-AS1Q5T5F5 129 aa6.04□□□□□ -1.44
CDC42SE1-201ENST00000357235 C9orf85Q96MD7 179 aa6.04□□□□□ -1.44
CDC42SE1-201ENST00000357235 ZANQ9Y493 2812 aa6.03□□□□□ -1.44
CDC42SE1-201ENST00000357235 IGHV4-30-2A0A087WSY4 118 aa6.03□□□□□ -1.44
CDC42SE1-201ENST00000357235 A6NDX4 124 aa6.03□□□□□ -1.44
CDC42SE1-201ENST00000357235 SDIM1Q6ZPB5 146 aa6.03□□□□□ -1.44
CDC42SE1-201ENST00000357235 CCL19Q99731 98 aa6.03□□□□□ -1.44
CDC42SE1-201ENST00000357235 AVPP01185 164 aa6.03□□□□□ -1.44
CDC42SE1-201ENST00000357235 GNLYP22749 145 aa6.03□□□□□ -1.44
CDC42SE1-201ENST00000357235 HIST2H2BDQ6DRA6 164 aa6.03□□□□□ -1.44
CDC42SE1-201ENST00000357235 LINC00336Q6ZUF6 198 aa6.03□□□□□ -1.44
CDC42SE1-201ENST00000357235 PTPN13Q12923 2485 aa6.03□□□□□ -1.44
CDC42SE1-201ENST00000357235 KHDC1LQ5JSQ8 128 aa6.02□□□□□ -1.45
CDC42SE1-201ENST00000357235 IGHV3OR16-12A0A075B7B8 117 aa6.02□□□□□ -1.45
CDC42SE1-201ENST00000357235 H3BUA1 57 aa6.02□□□□□ -1.45
CDC42SE1-201ENST00000357235 IGLV1-40P01703 118 aa6.02□□□□□ -1.45
CDC42SE1-201ENST00000357235 ITPR1Q14643 2758 aa6.02□□□□□ -1.45
CDC42SE1-201ENST00000357235 DEFB136Q30KP8 78 aa6.02□□□□□ -1.45
CDC42SE1-201ENST00000357235 DGAT2L7PQ6IED9 249 aa6.02□□□□□ -1.45
CDC42SE1-201ENST00000357235 DEFB131AP59861 70 aa6.01□□□□□ -1.45
CDC42SE1-201ENST00000357235 ZNF415Q09FC8 603 aa6.01□□□□□ -1.45
CDC42SE1-201ENST00000357235 UPK3BQ9BT76 320 aa6.01□□□□□ -1.45
CDC42SE1-201ENST00000357235 IGSF10Q6WRI0 2623 aa6.01□□□□□ -1.45
CDC42SE1-201ENST00000357235 MSMBP08118 114 aa6.01□□□□□ -1.45
CDC42SE1-201ENST00000357235 KMT2BQ9UMN6 2715 aaPredicted RBP6.01□□□□□ -1.45
CDC42SE1-201ENST00000357235 DAZ2Q13117 558 aaKnown RBP6.01□□□□□ -1.45
CDC42SE1-201ENST00000357235 DAZ4Q86SG3 579 aaKnown RBP6.01□□□□□ -1.45
CDC42SE1-201ENST00000357235 DAZ3Q9NR90 486 aaKnown RBP6.01□□□□□ -1.45
CDC42SE1-201ENST00000357235 IGHV1-58A0A0C4DH39 117 aa6□□□□□ -1.45
CDC42SE1-201ENST00000357235 K7EMT4 169 aa6□□□□□ -1.45
CDC42SE1-201ENST00000357235 K7EQG2 157 aa6□□□□□ -1.45
CDC42SE1-201ENST00000357235 RS1O15537 224 aa6□□□□□ -1.45
CDC42SE1-201ENST00000357235 RBMY1A1P0DJD3 496 aaKnown RBP6□□□□□ -1.45
CDC42SE1-201ENST00000357235 RBMY1CP0DJD4 496 aa6□□□□□ -1.45
CDC42SE1-201ENST00000357235 RBMY1FQ15415 496 aaKnown RBP6□□□□□ -1.45
CDC42SE1-201ENST00000357235 MYO18BQ8IUG5 2567 aa6□□□□□ -1.45
CDC42SE1-201ENST00000357235 DEFB112Q30KQ8 113 aa6□□□□□ -1.45
CDC42SE1-201ENST00000357235 V9GYY9 64 aa6□□□□□ -1.45
CDC42SE1-201ENST00000357235 SONP18583 2426 aaKnown RBP6□□□□□ -1.45
CDC42SE1-201ENST00000357235 INAFM2P0DMQ5 153 aa5.99□□□□□ -1.45
CDC42SE1-201ENST00000357235 PSMB8P28062 276 aa5.99□□□□□ -1.45
CDC42SE1-201ENST00000357235 HOXD3P31249 432 aaPredicted RBP5.99□□□□□ -1.45
CDC42SE1-201ENST00000357235 Q6ZSN1 163 aa5.99□□□□□ -1.45
CDC42SE1-201ENST00000357235 CDKN2A-AS1Q9UH64 79 aa5.99□□□□□ -1.45
CDC42SE1-201ENST00000357235 FASNP49327 2511 aaKnown RBP5.99□□□□□ -1.45
CDC42SE1-201ENST00000357235 UTP20O75691 2785 aaKnown RBP5.99□□□□□ -1.45
CDC42SE1-201ENST00000357235 TIRAPP58753 221 aa5.99□□□□□ -1.45
CDC42SE1-201ENST00000357235 TMEM61Q8N0U2 210 aa5.99□□□□□ -1.45
CDC42SE1-201ENST00000357235 ZNF843Q8N446 348 aa5.99□□□□□ -1.45
CDC42SE1-201ENST00000357235 LINC00467Q9BRT7 94 aa5.99□□□□□ -1.45
CDC42SE1-201ENST00000357235 MRPS36P82909 103 aaKnown RBP5.99□□□□□ -1.45
CDC42SE1-201ENST00000357235 TMEM86BQ8N661 226 aa5.99□□□□□ -1.45
CDC42SE1-201ENST00000357235 VSIG2Q96IQ7 327 aa5.99□□□□□ -1.45
CDC42SE1-201ENST00000357235 LITAFQ99732 161 aa5.99□□□□□ -1.45
CDC42SE1-201ENST00000357235 ZNF462Q96JM2 2506 aa5.98□□□□□ -1.45
CDC42SE1-201ENST00000357235 FLNCQ14315 2725 aa5.98□□□□□ -1.45
CDC42SE1-201ENST00000357235 IGKV3D-7A0A0C4DH55 119 aa5.98□□□□□ -1.45
CDC42SE1-201ENST00000357235 BAALC-AS2P0C853 105 aa5.98□□□□□ -1.45
CDC42SE1-201ENST00000357235 USP17L23D6RBM5 183 aa5.98□□□□□ -1.45
CDC42SE1-201ENST00000357235 SLURP1P55000 103 aa5.98□□□□□ -1.45
CDC42SE1-201ENST00000357235 MIAQ16674 131 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms