RNA–Protein interactions for RNA: ENST00000356634.7

KDM1A-201, Transcript of lysine demethylase 1A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KDM1A, Length 3,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-201ENST00000356634 K7EQG2 157 aa12.92□□□□□ -0.34
KDM1A-201ENST00000356634 Q6ZSN1 163 aa12.92□□□□□ -0.34
KDM1A-201ENST00000356634 Q9H8V8 135 aa12.92□□□□□ -0.34
KDM1A-201ENST00000356634 UBE2D4Q9Y2X8 147 aa12.92□□□□□ -0.34
KDM1A-201ENST00000356634 RBMY1A1P0DJD3 496 aaKnown RBP12.92□□□□□ -0.34
KDM1A-201ENST00000356634 RBMY1CP0DJD4 496 aa12.92□□□□□ -0.34
KDM1A-201ENST00000356634 RBMY1FQ15415 496 aaKnown RBP12.92□□□□□ -0.34
KDM1A-201ENST00000356634 CITED2Q99967 270 aaPredicted RBP12.91□□□□□ -0.34
KDM1A-201ENST00000356634 HIST2H2BDQ6DRA6 164 aa12.91□□□□□ -0.34
KDM1A-201ENST00000356634 CHCHD7Q9BUK0 85 aa12.91□□□□□ -0.34
KDM1A-201ENST00000356634 USP24Q9UPU5 2620 aa12.91□□□□□ -0.34
KDM1A-201ENST00000356634 BRI3O95415 125 aa12.9□□□□□ -0.34
KDM1A-201ENST00000356634 ZNF469Q96JG9 3925 aaPredicted RBP12.9□□□□□ -0.34
KDM1A-201ENST00000356634 SPANXA1Q9NS26 97 aa12.9□□□□□ -0.34
KDM1A-201ENST00000356634 LINC00308Q8TCZ7 52 aa12.89□□□□□ -0.35
KDM1A-201ENST00000356634 CHD6Q8TD26 2715 aa12.89□□□□□ -0.35
KDM1A-201ENST00000356634 TRBV7-7A0A0K0K1E9 115 aa12.88□□□□□ -0.35
KDM1A-201ENST00000356634 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.88□□□□□ -0.35
KDM1A-201ENST00000356634 DAZ2Q13117 558 aaKnown RBP12.88□□□□□ -0.35
KDM1A-201ENST00000356634 C9orf153Q5TBE3 101 aa12.88□□□□□ -0.35
KDM1A-201ENST00000356634 DAZ4Q86SG3 579 aaKnown RBP12.88□□□□□ -0.35
KDM1A-201ENST00000356634 Q8N2B8 174 aa12.88□□□□□ -0.35
KDM1A-201ENST00000356634 DAZ3Q9NR90 486 aaKnown RBP12.88□□□□□ -0.35
KDM1A-201ENST00000356634 DEFB131AP59861 70 aa12.87□□□□□ -0.35
KDM1A-201ENST00000356634 UCNP55089 124 aa12.87□□□□□ -0.35
KDM1A-201ENST00000356634 COX6A2Q02221 97 aa12.87□□□□□ -0.35
KDM1A-201ENST00000356634 DEFB121Q5J5C9 76 aa12.87□□□□□ -0.35
KDM1A-201ENST00000356634 SMCR5Q8TEV8 140 aa12.87□□□□□ -0.35
KDM1A-201ENST00000356634 TRAV13-1A0A0B4J241 112 aa12.86□□□□□ -0.35
KDM1A-201ENST00000356634 NDUFA1O15239 70 aa12.86□□□□□ -0.35
KDM1A-201ENST00000356634 CFAP161Q6P656 301 aa12.86□□□□□ -0.35
KDM1A-201ENST00000356634 NBPF19A0A087WUL8 3843 aa12.86□□□□□ -0.35
KDM1A-201ENST00000356634 COX7A2LO14548 114 aa12.86□□□□□ -0.35
KDM1A-201ENST00000356634 NDUFA7O95182 113 aa12.86□□□□□ -0.35
KDM1A-201ENST00000356634 PIMREGQ9BSJ6 248 aa12.86□□□□□ -0.35
KDM1A-201ENST00000356634 BAALC-AS2P0C853 105 aa12.85□□□□□ -0.35
KDM1A-201ENST00000356634 PRIMA1Q86XR5 153 aa12.85□□□□□ -0.35
KDM1A-201ENST00000356634 LINC01587Q99440 93 aa12.85□□□□□ -0.35
KDM1A-201ENST00000356634 PSMB8P28062 276 aa12.85□□□□□ -0.35
KDM1A-201ENST00000356634 GAGE2AQ6NT46 116 aa12.84□□□□□ -0.35
KDM1A-201ENST00000356634 TIMM17BO60830 172 aa12.84□□□□□ -0.35
KDM1A-201ENST00000356634 IGHV4-59P01825 116 aa12.83□□□□□ -0.35
KDM1A-201ENST00000356634 PRB1P04280 392 aa12.83□□□□□ -0.35
KDM1A-201ENST00000356634 ACYP1P07311 99 aa12.83□□□□□ -0.35
KDM1A-201ENST00000356634 HOXD3P31249 432 aaPredicted RBP12.83□□□□□ -0.35
KDM1A-201ENST00000356634 CFHR3Q02985 330 aa12.83□□□□□ -0.35
KDM1A-201ENST00000356634 Q9HAA7 133 aa12.83□□□□□ -0.36
KDM1A-201ENST00000356634 RS1O15537 224 aa12.83□□□□□ -0.36
KDM1A-201ENST00000356634 TMEM126AQ9H061 195 aa12.83□□□□□ -0.36
KDM1A-201ENST00000356634 SOSTDC1Q6X4U4 206 aa12.82□□□□□ -0.36
KDM1A-201ENST00000356634 PPDPFQ9H3Y8 114 aa12.82□□□□□ -0.36
KDM1A-201ENST00000356634 IGHV4-30-2A0A087WSY4 118 aa12.82□□□□□ -0.36
KDM1A-201ENST00000356634 ZNF415Q09FC8 603 aa12.82□□□□□ -0.36
KDM1A-201ENST00000356634 ATP5J2P56134 94 aa12.81□□□□□ -0.36
KDM1A-201ENST00000356634 PIK3CD-AS1Q5SR53 167 aa12.81□□□□□ -0.36
KDM1A-201ENST00000356634 LINC00643Q86TS7 51 aa12.81□□□□□ -0.36
KDM1A-201ENST00000356634 IGHV3OR16-12A0A075B7B8 117 aa12.81□□□□□ -0.36
KDM1A-201ENST00000356634 AVPP01185 164 aa12.81□□□□□ -0.36
KDM1A-201ENST00000356634 DEFB136Q30KP8 78 aa12.8□□□□□ -0.36
KDM1A-201ENST00000356634 LINC00694P0DN24 101 aa12.79□□□□□ -0.36
KDM1A-201ENST00000356634 KLK5Q9Y337 293 aaPredicted RBP12.79□□□□□ -0.36
KDM1A-201ENST00000356634 LINC00242Q5T6M2 205 aa12.79□□□□□ -0.36
KDM1A-201ENST00000356634 FAM218AQ96MZ4 157 aa12.79□□□□□ -0.36
KDM1A-201ENST00000356634 IMUPQ9GZP8 106 aa12.79□□□□□ -0.36
KDM1A-201ENST00000356634 MSMBP08118 114 aa12.78□□□□□ -0.36
KDM1A-201ENST00000356634 TIRAPP58753 221 aa12.78□□□□□ -0.36
KDM1A-201ENST00000356634 HERVK_113P63121 156 aa12.78□□□□□ -0.36
KDM1A-201ENST00000356634 VPREB3Q9UKI3 123 aa12.78□□□□□ -0.36
KDM1A-201ENST00000356634 C3orf22Q8N5N4 141 aa12.78□□□□□ -0.36
KDM1A-201ENST00000356634 CCL19Q99731 98 aa12.78□□□□□ -0.36
KDM1A-201ENST00000356634 RBMY1BA6NDE4 496 aaKnown RBP12.77□□□□□ -0.36
KDM1A-201ENST00000356634 RBMY1EA6NEQ0 496 aaKnown RBP12.77□□□□□ -0.36
KDM1A-201ENST00000356634 IGHV3-53P01767 116 aa12.77□□□□□ -0.36
KDM1A-201ENST00000356634 RBMY1DP0C7P1 496 aaKnown RBP12.77□□□□□ -0.36
KDM1A-201ENST00000356634 DEFB112Q30KQ8 113 aa12.76□□□□□ -0.37
KDM1A-201ENST00000356634 EDA2RQ9HAV5 297 aa12.76□□□□□ -0.37
KDM1A-201ENST00000356634 COPS9Q8WXC6 57 aa12.76□□□□□ -0.37
KDM1A-201ENST00000356634 SMIM1B2RUZ4 78 aa12.75□□□□□ -0.37
KDM1A-201ENST00000356634 SLURP1P55000 103 aa12.75□□□□□ -0.37
KDM1A-201ENST00000356634 FLNAP21333 2647 aaKnown RBP12.75□□□□□ -0.37
KDM1A-201ENST00000356634 C10orf105Q8TEF2 133 aa12.75□□□□□ -0.37
KDM1A-201ENST00000356634 IGKV3OR2-268A0A0C4DH90 116 aa12.75□□□□□ -0.37
KDM1A-201ENST00000356634 LOC107984640A0A0U1RRK4 108 aa12.75□□□□□ -0.37
KDM1A-201ENST00000356634 IGLV5-45A0A087WSX0 123 aa12.74□□□□□ -0.37
KDM1A-201ENST00000356634 UQCRQO14949 82 aa12.74□□□□□ -0.37
KDM1A-201ENST00000356634 TRACP01848 142 aa12.74□□□□□ -0.37
KDM1A-201ENST00000356634 TOMM7Q9P0U1 55 aa12.74□□□□□ -0.37
KDM1A-201ENST00000356634 KHDC1LQ5JSQ8 128 aa12.74□□□□□ -0.37
KDM1A-201ENST00000356634 AKAP9Q99996 3911 aa12.73□□□□□ -0.37
KDM1A-201ENST00000356634 IGLV5-39A0A0G2JS06 123 aa12.73□□□□□ -0.37
KDM1A-201ENST00000356634 DNAL4O96015 105 aa12.73□□□□□ -0.37
KDM1A-201ENST00000356634 XCL2Q9UBD3 114 aa12.73□□□□□ -0.37
KDM1A-201ENST00000356634 SDIM1Q6ZPB5 146 aa12.72□□□□□ -0.37
KDM1A-201ENST00000356634 APCP25054 2843 aa12.72□□□□□ -0.37
KDM1A-201ENST00000356634 TRGV1A0A0A0MS02 117 aa12.72□□□□□ -0.37
KDM1A-201ENST00000356634 CRPP02741 224 aa12.72□□□□□ -0.37
KDM1A-201ENST00000356634 INAFM2P0DMQ5 153 aa12.72□□□□□ -0.37
KDM1A-201ENST00000356634 DNAJC30Q96LL9 226 aa12.72□□□□□ -0.37
KDM1A-201ENST00000356634 C18orf65Q6ZTR6 163 aa12.72□□□□□ -0.37
KDM1A-201ENST00000356634 PEMTQ9UBM1 199 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms