RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 CRIP1P50238 77 aa13.37□□□□□ -0.27
COL18A1-202ENST00000355480 LINC00643Q86TS7 51 aa13.36□□□□□ -0.27
COL18A1-202ENST00000355480 LINC00308Q8TCZ7 52 aa13.36□□□□□ -0.27
COL18A1-202ENST00000355480 SPANXB1Q9NS25 103 aaPredicted RBP13.36□□□□□ -0.27
COL18A1-202ENST00000355480 HIVEP3Q5T1R4 2406 aa13.36□□□□□ -0.27
COL18A1-202ENST00000355480 KPRPQ5T749 579 aaPredicted RBP13.36□□□□□ -0.27
COL18A1-202ENST00000355480 DCANP1Q8TF63 244 aa13.35□□□□□ -0.27
COL18A1-202ENST00000355480 ZNF106Q9H2Y7 1883 aaKnown RBP13.35□□□□□ -0.27
COL18A1-202ENST00000355480 RBX1P62877 108 aa13.35□□□□□ -0.27
COL18A1-202ENST00000355480 SCXQ7RTU7 201 aa13.34□□□□□ -0.27
COL18A1-202ENST00000355480 IGKV2-28A0A075B6P5 120 aa13.33□□□□□ -0.28
COL18A1-202ENST00000355480 IGKV2D-28P01615 120 aa13.33□□□□□ -0.28
COL18A1-202ENST00000355480 NDUFC2O95298 119 aa13.33□□□□□ -0.28
COL18A1-202ENST00000355480 MBD6Q96DN6 1003 aa13.33□□□□□ -0.28
COL18A1-202ENST00000355480 USP17L23D6RBM5 183 aa13.32□□□□□ -0.28
COL18A1-202ENST00000355480 LY6G6CO95867 125 aa13.32□□□□□ -0.28
COL18A1-202ENST00000355480 RNASE8Q8TDE3 154 aaKnown RBP13.32□□□□□ -0.28
COL18A1-202ENST00000355480 Q8N6K4 173 aa13.32□□□□□ -0.28
COL18A1-202ENST00000355480 C6orf99Q4VX62 202 aa13.32□□□□□ -0.28
COL18A1-202ENST00000355480 LINC00526Q96FQ7 95 aa13.32□□□□□ -0.28
COL18A1-202ENST00000355480 MYO18BQ8IUG5 2567 aa13.31□□□□□ -0.28
COL18A1-202ENST00000355480 Q6ZS46 218 aa13.31□□□□□ -0.28
COL18A1-202ENST00000355480 RNF185Q96GF1 192 aa13.31□□□□□ -0.28
COL18A1-202ENST00000355480 J3KT08 172 aa13.31□□□□□ -0.28
COL18A1-202ENST00000355480 UBE2D1P51668 147 aa13.31□□□□□ -0.28
COL18A1-202ENST00000355480 LOC100131303A0A0U1RQF7 123 aa13.31□□□□□ -0.28
COL18A1-202ENST00000355480 CD164L2Q6UWJ8 174 aa13.3□□□□□ -0.28
COL18A1-202ENST00000355480 CLUHP3Q96NS8 147 aa13.3□□□□□ -0.28
COL18A1-202ENST00000355480 TEX49A0A1B0GTD5 131 aa13.3□□□□□ -0.28
COL18A1-202ENST00000355480 PPDPFQ9H3Y8 114 aa13.3□□□□□ -0.28
COL18A1-202ENST00000355480 C1orf158Q8N1D5 194 aa13.3□□□□□ -0.28
COL18A1-202ENST00000355480 KIAA1549LQ6ZVL6 1849 aa13.3□□□□□ -0.28
COL18A1-202ENST00000355480 C9orf85Q96MD7 179 aa13.29□□□□□ -0.28
COL18A1-202ENST00000355480 TRBV27A0A0K0K1C4 114 aa13.29□□□□□ -0.28
COL18A1-202ENST00000355480 G3V4G9 280 aa13.29□□□□□ -0.28
COL18A1-202ENST00000355480 LELP1Q5T871 98 aa13.29□□□□□ -0.28
COL18A1-202ENST00000355480 SDIM1Q6ZPB5 146 aa13.29□□□□□ -0.28
COL18A1-202ENST00000355480 PLA2G2AP14555 144 aa13.29□□□□□ -0.28
COL18A1-202ENST00000355480 WFDC10BQ8IUB3 73 aa13.28□□□□□ -0.28
COL18A1-202ENST00000355480 ALPK3Q96L96 1907 aa13.28□□□□□ -0.28
COL18A1-202ENST00000355480 MED12LQ86YW9 2145 aa13.28□□□□□ -0.28
COL18A1-202ENST00000355480 NAV2Q8IVL1 2488 aa13.28□□□□□ -0.28
COL18A1-202ENST00000355480 RNASE3P12724 160 aaKnown RBP13.28□□□□□ -0.28
COL18A1-202ENST00000355480 A8MZ25 164 aa13.28□□□□□ -0.28
COL18A1-202ENST00000355480 PYGO1Q9Y3Y4 419 aa13.28□□□□□ -0.28
COL18A1-202ENST00000355480 IGLV1-40P01703 118 aa13.27□□□□□ -0.29
COL18A1-202ENST00000355480 PRM2P04554 102 aa13.27□□□□□ -0.29
COL18A1-202ENST00000355480 OXLD1Q5BKU9 147 aa13.27□□□□□ -0.29
COL18A1-202ENST00000355480 PCDH15Q96QU1 1955 aa13.27□□□□□ -0.29
COL18A1-202ENST00000355480 TRBV6-5A0A0K0K1A5 114 aa13.27□□□□□ -0.29
COL18A1-202ENST00000355480 TSHBP01222 138 aa13.27□□□□□ -0.29
COL18A1-202ENST00000355480 CCKP06307 115 aa13.27□□□□□ -0.29
COL18A1-202ENST00000355480 MAPKAPK5-AS1Q8N8E1 139 aa13.27□□□□□ -0.29
COL18A1-202ENST00000355480 SPINK6Q6UWN8 80 aa13.26□□□□□ -0.29
COL18A1-202ENST00000355480 U3KQK5 164 aa13.26□□□□□ -0.29
COL18A1-202ENST00000355480 IGLV4-69A0A075B6H9 119 aa13.26□□□□□ -0.29
COL18A1-202ENST00000355480 PRR9Q5T870 116 aa13.26□□□□□ -0.29
COL18A1-202ENST00000355480 TRIAP1O43715 76 aa13.26□□□□□ -0.29
COL18A1-202ENST00000355480 IGLV2-11P01706 119 aa13.26□□□□□ -0.29
COL18A1-202ENST00000355480 NANOS2P60321 138 aaKnown RBP13.26□□□□□ -0.29
COL18A1-202ENST00000355480 ENHOQ6UWT2 76 aa13.25□□□□□ -0.29
COL18A1-202ENST00000355480 CCDC168Q8NDH2 2452 aa13.25□□□□□ -0.29
COL18A1-202ENST00000355480 A0A0J9YWU9 116 aa13.25□□□□□ -0.29
COL18A1-202ENST00000355480 LINC00959A0A1B0GUT2 108 aa13.25□□□□□ -0.29
COL18A1-202ENST00000355480 ZNF706Q9Y5V0 76 aaPredicted RBP13.25□□□□□ -0.29
COL18A1-202ENST00000355480 CDSNQ15517 529 aa13.24□□□□□ -0.29
COL18A1-202ENST00000355480 C3orf84H3BNL1 204 aa13.24□□□□□ -0.29
COL18A1-202ENST00000355480 KLLNB2CW77 178 aa13.24□□□□□ -0.29
COL18A1-202ENST00000355480 NAV3Q8IVL0 2385 aa13.24□□□□□ -0.29
COL18A1-202ENST00000355480 M0R378 163 aa13.24□□□□□ -0.29
COL18A1-202ENST00000355480 HRCT1Q6UXD1 115 aa13.24□□□□□ -0.29
COL18A1-202ENST00000355480 SMR3AQ99954 134 aa13.24□□□□□ -0.29
COL18A1-202ENST00000355480 C20orf197Q8N268 126 aa13.23□□□□□ -0.29
COL18A1-202ENST00000355480 TP73-AS1Q9UF72 201 aa13.23□□□□□ -0.29
COL18A1-202ENST00000355480 LOC107984640A0A0U1RRK4 108 aa13.23□□□□□ -0.29
COL18A1-202ENST00000355480 UBE2D4Q9Y2X8 147 aa13.23□□□□□ -0.29
COL18A1-202ENST00000355480 IGHV4-30-4P0DP06 118 aa13.22□□□□□ -0.29
COL18A1-202ENST00000355480 C11orf21Q9P2W6 132 aa13.22□□□□□ -0.29
COL18A1-202ENST00000355480 DHRS4-AS1Q9P1J3 65 aa13.22□□□□□ -0.29
COL18A1-202ENST00000355480 RPL37AP8A6NKH3 93 aa13.21□□□□□ -0.29
COL18A1-202ENST00000355480 COL4A4P53420 1690 aaPredicted RBP13.21□□□□□ -0.29
COL18A1-202ENST00000355480 TRBV30A0A0K0K1B3 111 aa13.21□□□□□ -0.29
COL18A1-202ENST00000355480 AVPP01185 164 aa13.21□□□□□ -0.3
COL18A1-202ENST00000355480 ATP5EP2Q5VTU8 51 aa13.21□□□□□ -0.3
COL18A1-202ENST00000355480 MRGPRG-AS1Q2M3A8 158 aa13.2□□□□□ -0.3
COL18A1-202ENST00000355480 Q6ZQY7 126 aa13.2□□□□□ -0.3
COL18A1-202ENST00000355480 NRACQ8N912 160 aa13.2□□□□□ -0.3
COL18A1-202ENST00000355480 SVIPQ8NHG7 77 aa13.2□□□□□ -0.3
COL18A1-202ENST00000355480 C3orf22Q8N5N4 141 aa13.2□□□□□ -0.3
COL18A1-202ENST00000355480 ABCA2Q9BZC7 2435 aa13.19□□□□□ -0.3
COL18A1-202ENST00000355480 UBE2D3P61077 147 aa13.18□□□□□ -0.3
COL18A1-202ENST00000355480 TIMM17BO60830 172 aa13.18□□□□□ -0.3
COL18A1-202ENST00000355480 KIAA1549Q9HCM3 1950 aa13.18□□□□□ -0.3
COL18A1-202ENST00000355480 NDUFA7O95182 113 aa13.17□□□□□ -0.3
COL18A1-202ENST00000355480 IGLV9-49A0A0B4J1Y8 123 aa13.17□□□□□ -0.3
COL18A1-202ENST00000355480 KRTAP10-9P60411 292 aa13.17□□□□□ -0.3
COL18A1-202ENST00000355480 PLAC8L1A1L4L8 177 aa13.17□□□□□ -0.3
COL18A1-202ENST00000355480 MRPS36P82909 103 aaKnown RBP13.16□□□□□ -0.3
COL18A1-202ENST00000355480 BRK1Q8WUW1 75 aa13.16□□□□□ -0.3
COL18A1-202ENST00000355480 MT-ATP8P03928 68 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms