RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 SYCNQ0VAF6 134 aa9.79□□□□□ -0.84
SCN8A-202ENST00000355133 LINC00308Q8TCZ7 52 aa9.79□□□□□ -0.84
SCN8A-202ENST00000355133 LOC100131303A0A0U1RQF7 123 aa9.79□□□□□ -0.84
SCN8A-202ENST00000355133 RNF185Q96GF1 192 aa9.79□□□□□ -0.84
SCN8A-202ENST00000355133 IBA57-AS1B1ANH7 110 aa9.78□□□□□ -0.84
SCN8A-202ENST00000355133 MBD6Q96DN6 1003 aa9.78□□□□□ -0.84
SCN8A-202ENST00000355133 A8MZ25 164 aa9.78□□□□□ -0.84
SCN8A-202ENST00000355133 TEX49A0A1B0GTD5 131 aa9.78□□□□□ -0.84
SCN8A-202ENST00000355133 IGKV2-28A0A075B6P5 120 aa9.78□□□□□ -0.84
SCN8A-202ENST00000355133 IGKV2D-28P01615 120 aa9.78□□□□□ -0.84
SCN8A-202ENST00000355133 KIR2DL5BQ8NHK3 375 aa9.78□□□□□ -0.84
SCN8A-202ENST00000355133 G3V4G9 280 aa9.77□□□□□ -0.85
SCN8A-202ENST00000355133 RBX1P62877 108 aa9.77□□□□□ -0.85
SCN8A-202ENST00000355133 MAPKAPK5-AS1Q8N8E1 139 aa9.77□□□□□ -0.85
SCN8A-202ENST00000355133 SDIM1Q6ZPB5 146 aa9.77□□□□□ -0.85
SCN8A-202ENST00000355133 LINC00643Q86TS7 51 aa9.77□□□□□ -0.85
SCN8A-202ENST00000355133 PRR14LQ5THK1 2151 aa9.77□□□□□ -0.85
SCN8A-202ENST00000355133 KIAA1549LQ6ZVL6 1849 aa9.77□□□□□ -0.85
SCN8A-202ENST00000355133 KPRPQ5T749 579 aaPredicted RBP9.76□□□□□ -0.85
SCN8A-202ENST00000355133 CASC2Q6XLA1 102 aa9.76□□□□□ -0.85
SCN8A-202ENST00000355133 PPDPFQ9H3Y8 114 aa9.76□□□□□ -0.85
SCN8A-202ENST00000355133 PCDH15Q96QU1 1955 aa9.76□□□□□ -0.85
SCN8A-202ENST00000355133 PRR9Q5T870 116 aa9.76□□□□□ -0.85
SCN8A-202ENST00000355133 ALPK3Q96L96 1907 aa9.76□□□□□ -0.85
SCN8A-202ENST00000355133 Q8N6K4 173 aa9.76□□□□□ -0.85
SCN8A-202ENST00000355133 CLUHP3Q96NS8 147 aa9.76□□□□□ -0.85
SCN8A-202ENST00000355133 SPANXB1Q9NS25 103 aaPredicted RBP9.76□□□□□ -0.85
SCN8A-202ENST00000355133 CDSNQ15517 529 aa9.75□□□□□ -0.85
SCN8A-202ENST00000355133 DSCAMO60469 2012 aa9.75□□□□□ -0.85
SCN8A-202ENST00000355133 C7orf33Q8WU49 177 aa9.75□□□□□ -0.85
SCN8A-202ENST00000355133 C6orf99Q4VX62 202 aa9.75□□□□□ -0.85
SCN8A-202ENST00000355133 IGLV2-11P01706 119 aa9.74□□□□□ -0.85
SCN8A-202ENST00000355133 J3KT08 172 aa9.74□□□□□ -0.85
SCN8A-202ENST00000355133 RNASE3P12724 160 aaKnown RBP9.74□□□□□ -0.85
SCN8A-202ENST00000355133 WFDC10BQ8IUB3 73 aa9.74□□□□□ -0.85
SCN8A-202ENST00000355133 C1orf158Q8N1D5 194 aa9.74□□□□□ -0.85
SCN8A-202ENST00000355133 LY6G6CO95867 125 aa9.74□□□□□ -0.85
SCN8A-202ENST00000355133 TRIAP1O43715 76 aa9.73□□□□□ -0.85
SCN8A-202ENST00000355133 TSHBP01222 138 aa9.73□□□□□ -0.85
SCN8A-202ENST00000355133 SMR3AQ99954 134 aa9.73□□□□□ -0.85
SCN8A-202ENST00000355133 U3KQK5 164 aa9.73□□□□□ -0.85
SCN8A-202ENST00000355133 SORL1Q92673 2214 aa9.73□□□□□ -0.85
SCN8A-202ENST00000355133 ENHOQ6UWT2 76 aa9.73□□□□□ -0.85
SCN8A-202ENST00000355133 NDUFC2O95298 119 aa9.73□□□□□ -0.85
SCN8A-202ENST00000355133 C11orf21Q9P2W6 132 aa9.73□□□□□ -0.85
SCN8A-202ENST00000355133 HRCT1Q6UXD1 115 aa9.73□□□□□ -0.85
SCN8A-202ENST00000355133 COL4A4P53420 1690 aaPredicted RBP9.72□□□□□ -0.85
SCN8A-202ENST00000355133 MED12LQ86YW9 2145 aa9.72□□□□□ -0.85
SCN8A-202ENST00000355133 TRBV27A0A0K0K1C4 114 aa9.72□□□□□ -0.85
SCN8A-202ENST00000355133 OXLD1Q5BKU9 147 aa9.72□□□□□ -0.85
SCN8A-202ENST00000355133 USP17L23D6RBM5 183 aa9.72□□□□□ -0.85
SCN8A-202ENST00000355133 NANOS2P60321 138 aaKnown RBP9.72□□□□□ -0.85
SCN8A-202ENST00000355133 CD164L2Q6UWJ8 174 aa9.72□□□□□ -0.85
SCN8A-202ENST00000355133 C3orf84H3BNL1 204 aa9.71□□□□□ -0.85
SCN8A-202ENST00000355133 IGLV1-40P01703 118 aa9.71□□□□□ -0.85
SCN8A-202ENST00000355133 SPINK6Q6UWN8 80 aa9.71□□□□□ -0.85
SCN8A-202ENST00000355133 C9orf85Q96MD7 179 aa9.71□□□□□ -0.85
SCN8A-202ENST00000355133 PLA2G2AP14555 144 aa9.71□□□□□ -0.86
SCN8A-202ENST00000355133 CACNA1AO00555 2505 aa9.71□□□□□ -0.86
SCN8A-202ENST00000355133 HIVEP3Q5T1R4 2406 aa9.71□□□□□ -0.86
SCN8A-202ENST00000355133 CCKP06307 115 aa9.71□□□□□ -0.86
SCN8A-202ENST00000355133 A0A0J9YWU9 116 aa9.7□□□□□ -0.86
SCN8A-202ENST00000355133 NUP210LQ5VU65 1888 aa9.7□□□□□ -0.86
SCN8A-202ENST00000355133 RPL37AP8A6NKH3 93 aa9.7□□□□□ -0.86
SCN8A-202ENST00000355133 AVPP01185 164 aa9.7□□□□□ -0.86
SCN8A-202ENST00000355133 LELP1Q5T871 98 aa9.7□□□□□ -0.86
SCN8A-202ENST00000355133 LINC00959A0A1B0GUT2 108 aa9.7□□□□□ -0.86
SCN8A-202ENST00000355133 C20orf197Q8N268 126 aa9.7□□□□□ -0.86
SCN8A-202ENST00000355133 PYGO1Q9Y3Y4 419 aa9.7□□□□□ -0.86
SCN8A-202ENST00000355133 TRBV6-5A0A0K0K1A5 114 aa9.7□□□□□ -0.86
SCN8A-202ENST00000355133 UBE2D1P51668 147 aa9.69□□□□□ -0.86
SCN8A-202ENST00000355133 NRACQ8N912 160 aa9.69□□□□□ -0.86
SCN8A-202ENST00000355133 KLLNB2CW77 178 aa9.69□□□□□ -0.86
SCN8A-202ENST00000355133 MT-ATP8P03928 68 aa9.69□□□□□ -0.86
SCN8A-202ENST00000355133 UBE2D4Q9Y2X8 147 aa9.69□□□□□ -0.86
SCN8A-202ENST00000355133 EDN2P20800 178 aa9.69□□□□□ -0.86
SCN8A-202ENST00000355133 KIAA1549Q9HCM3 1950 aa9.68□□□□□ -0.86
SCN8A-202ENST00000355133 PCNX3Q9H6A9 2034 aa9.68□□□□□ -0.86
SCN8A-202ENST00000355133 IGLV4-69A0A075B6H9 119 aa9.68□□□□□ -0.86
SCN8A-202ENST00000355133 KRTAP10-9P60411 292 aa9.68□□□□□ -0.86
SCN8A-202ENST00000355133 M0R378 163 aa9.67□□□□□ -0.86
SCN8A-202ENST00000355133 GAS8-AS1O95177 125 aa9.67□□□□□ -0.86
SCN8A-202ENST00000355133 TRBV30A0A0K0K1B3 111 aa9.67□□□□□ -0.86
SCN8A-202ENST00000355133 IGHV4-30-4P0DP06 118 aa9.67□□□□□ -0.86
SCN8A-202ENST00000355133 Q6ZQY7 126 aa9.67□□□□□ -0.86
SCN8A-202ENST00000355133 TANC2Q9HCD6 1990 aa9.67□□□□□ -0.86
SCN8A-202ENST00000355133 SVIPQ8NHG7 77 aa9.66□□□□□ -0.86
SCN8A-202ENST00000355133 LOC107984640A0A0U1RRK4 108 aa9.65□□□□□ -0.86
SCN8A-202ENST00000355133 MPLKIPQ8TAP9 179 aa9.65□□□□□ -0.86
SCN8A-202ENST00000355133 BRK1Q8WUW1 75 aa9.65□□□□□ -0.86
SCN8A-202ENST00000355133 IGLV9-49A0A0B4J1Y8 123 aa9.65□□□□□ -0.86
SCN8A-202ENST00000355133 C3orf22Q8N5N4 141 aa9.64□□□□□ -0.87
SCN8A-202ENST00000355133 RETNQ9HD89 108 aa9.64□□□□□ -0.87
SCN8A-202ENST00000355133 NDUFV3P56181 108 aaKnown RBP9.64□□□□□ -0.87
SCN8A-202ENST00000355133 SPTSSBQ8NFR3 76 aa9.64□□□□□ -0.87
SCN8A-202ENST00000355133 MRGPRG-AS1Q2M3A8 158 aa9.64□□□□□ -0.87
SCN8A-202ENST00000355133 DHRS4-AS1Q9P1J3 65 aa9.64□□□□□ -0.87
SCN8A-202ENST00000355133 WFDC13Q8IUB5 93 aa9.64□□□□□ -0.87
SCN8A-202ENST00000355133 ZNF706Q9Y5V0 76 aaPredicted RBP9.63□□□□□ -0.87
SCN8A-202ENST00000355133 PLAC8L1A1L4L8 177 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms