RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 IGKV3OR2-268A0A0C4DH90 116 aa5.56□□□□□ -1.52
BRCA1-201ENST00000352993 TIMM17BO60830 172 aa5.56□□□□□ -1.52
BRCA1-201ENST00000352993 COX6A2Q02221 97 aa5.56□□□□□ -1.52
BRCA1-201ENST00000352993 DCHS2Q6V1P9 2916 aa5.56□□□□□ -1.52
BRCA1-201ENST00000352993 BLCAPP62952 87 aa5.56□□□□□ -1.52
BRCA1-201ENST00000352993 Q8NA96 180 aa5.56□□□□□ -1.52
BRCA1-201ENST00000352993 DPH3Q96FX2 82 aa5.56□□□□□ -1.52
BRCA1-201ENST00000352993 SOSTDC1Q6X4U4 206 aa5.56□□□□□ -1.52
BRCA1-201ENST00000352993 SERP2Q8N6R1 65 aa5.56□□□□□ -1.52
BRCA1-201ENST00000352993 C2orf48Q96LS8 159 aa5.56□□□□□ -1.52
BRCA1-201ENST00000352993 BBC3Q96PG8 261 aaPredicted RBP5.56□□□□□ -1.52
BRCA1-201ENST00000352993 TMEM258P61165 79 aa5.55□□□□□ -1.52
BRCA1-201ENST00000352993 C10orf105Q8TEF2 133 aa5.55□□□□□ -1.52
BRCA1-201ENST00000352993 BPESC1Q9GZL8 116 aa5.55□□□□□ -1.52
BRCA1-201ENST00000352993 H3BUX3 64 aa5.55□□□□□ -1.52
BRCA1-201ENST00000352993 RNASE1P07998 156 aaKnown RBP5.55□□□□□ -1.52
BRCA1-201ENST00000352993 UBR5O95071 2799 aaPredicted RBP5.55□□□□□ -1.52
BRCA1-201ENST00000352993 SPG11Q96JI7 2443 aa5.55□□□□□ -1.52
BRCA1-201ENST00000352993 TRAV25A0A0B4J276 109 aa5.55□□□□□ -1.52
BRCA1-201ENST00000352993 USP17L23D6RBM5 183 aa5.55□□□□□ -1.52
BRCA1-201ENST00000352993 F5H768 121 aa5.55□□□□□ -1.52
BRCA1-201ENST00000352993 IGHG2P01859 326 aa5.55□□□□□ -1.52
BRCA1-201ENST00000352993 CHCHD7Q9BUK0 85 aa5.55□□□□□ -1.52
BRCA1-201ENST00000352993 ASH1LQ9NR48 2969 aaKnown RBP5.55□□□□□ -1.52
BRCA1-201ENST00000352993 RPS28P62857 69 aaKnown RBP5.54□□□□□ -1.52
BRCA1-201ENST00000352993 C19orf54Q5BKX5 351 aa5.54□□□□□ -1.52
BRCA1-201ENST00000352993 HIST2H2BCQ6DN03 193 aa5.54□□□□□ -1.52
BRCA1-201ENST00000352993 HIST2H2BDQ6DRA6 164 aa5.54□□□□□ -1.52
BRCA1-201ENST00000352993 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.54□□□□□ -1.52
BRCA1-201ENST00000352993 FAM104AQ969W3 186 aa5.54□□□□□ -1.52
BRCA1-201ENST00000352993 NCR3O14931 201 aa5.54□□□□□ -1.52
BRCA1-201ENST00000352993 LINC00158P58513 81 aa5.54□□□□□ -1.52
BRCA1-201ENST00000352993 Q6ZSN1 163 aa5.54□□□□□ -1.52
BRCA1-201ENST00000352993 LINC00846Q9NV44 126 aa5.54□□□□□ -1.52
BRCA1-201ENST00000352993 IGHV3OR16-12A0A075B7B8 117 aa5.54□□□□□ -1.52
BRCA1-201ENST00000352993 SLPIP03973 132 aa5.54□□□□□ -1.52
BRCA1-201ENST00000352993 PLA2G2AP14555 144 aa5.54□□□□□ -1.52
BRCA1-201ENST00000352993 CHD6Q8TD26 2715 aa5.53□□□□□ -1.52
BRCA1-201ENST00000352993 LECT2O14960 151 aa5.53□□□□□ -1.52
BRCA1-201ENST00000352993 WFDC9Q8NEX5 89 aa5.53□□□□□ -1.52
BRCA1-201ENST00000352993 TRAV23DV6A0A075B6W5 121 aa5.53□□□□□ -1.52
BRCA1-201ENST00000352993 TRAV13-2A0A0B4J235 113 aa5.53□□□□□ -1.52
BRCA1-201ENST00000352993 TENM4Q6N022 2769 aa5.53□□□□□ -1.52
BRCA1-201ENST00000352993 RELNP78509 3460 aa5.53□□□□□ -1.52
BRCA1-201ENST00000352993 A0A087WYN8 130 aa5.53□□□□□ -1.52
BRCA1-201ENST00000352993 CDSNQ15517 529 aa5.53□□□□□ -1.52
BRCA1-201ENST00000352993 SND1-IT1Q9HBX3 110 aa5.53□□□□□ -1.52
BRCA1-201ENST00000352993 ATRXP46100 2492 aa5.52□□□□□ -1.53
BRCA1-201ENST00000352993 RPL36AP83881 106 aaKnown RBP5.52□□□□□ -1.53
BRCA1-201ENST00000352993 KLK9Q2XQG4 91 aa5.52□□□□□ -1.53
BRCA1-201ENST00000352993 C9orf129Q5T035 196 aaKnown RBP5.52□□□□□ -1.53
BRCA1-201ENST00000352993 RPL36ALQ969Q0 106 aaKnown RBP5.52□□□□□ -1.53
BRCA1-201ENST00000352993 PAX4O43316 350 aa5.52□□□□□ -1.53
BRCA1-201ENST00000352993 IGHV3-53P01767 116 aa5.52□□□□□ -1.53
BRCA1-201ENST00000352993 LINC00242Q5T6M2 205 aa5.52□□□□□ -1.53
BRCA1-201ENST00000352993 FAM222AQ5U5X8 452 aa5.52□□□□□ -1.53
BRCA1-201ENST00000352993 MIR7-3HGQ8N6C7 128 aa5.52□□□□□ -1.53
BRCA1-201ENST00000352993 IGSF10Q6WRI0 2623 aa5.52□□□□□ -1.53
BRCA1-201ENST00000352993 GHRHP01286 108 aa5.52□□□□□ -1.53
BRCA1-201ENST00000352993 PFN2P35080 140 aa5.52□□□□□ -1.53
BRCA1-201ENST00000352993 DEFB131AP59861 70 aa5.52□□□□□ -1.53
BRCA1-201ENST00000352993 C20orf197Q8N268 126 aa5.51□□□□□ -1.53
BRCA1-201ENST00000352993 PIMREGQ9BSJ6 248 aa5.51□□□□□ -1.53
BRCA1-201ENST00000352993 SMIM1B2RUZ4 78 aa5.51□□□□□ -1.53
BRCA1-201ENST00000352993 HILS1P60008 231 aa5.51□□□□□ -1.53
BRCA1-201ENST00000352993 ZNF415Q09FC8 603 aa5.51□□□□□ -1.53
BRCA1-201ENST00000352993 BEAN1Q3B7T3 259 aa5.51□□□□□ -1.53
BRCA1-201ENST00000352993 ZNF843Q8N446 348 aa5.51□□□□□ -1.53
BRCA1-201ENST00000352993 TMEM243Q9BU79 118 aa5.51□□□□□ -1.53
BRCA1-201ENST00000352993 Q6JHZ5 121 aa5.51□□□□□ -1.53
BRCA1-201ENST00000352993 SMIM11BQ8TCY0 68 aa5.51□□□□□ -1.53
BRCA1-201ENST00000352993 C11orf68Q9H3H3 251 aaKnown RBP5.51□□□□□ -1.53
BRCA1-201ENST00000352993 RBMY1BA6NDE4 496 aaKnown RBP5.5□□□□□ -1.53
BRCA1-201ENST00000352993 RBMY1EA6NEQ0 496 aaKnown RBP5.5□□□□□ -1.53
BRCA1-201ENST00000352993 K7EQG2 157 aa5.5□□□□□ -1.53
BRCA1-201ENST00000352993 UBE2L6O14933 153 aa5.5□□□□□ -1.53
BRCA1-201ENST00000352993 RBMY1DP0C7P1 496 aaKnown RBP5.5□□□□□ -1.53
BRCA1-201ENST00000352993 RBMY1A1P0DJD3 496 aaKnown RBP5.5□□□□□ -1.53
BRCA1-201ENST00000352993 RBMY1CP0DJD4 496 aa5.5□□□□□ -1.53
BRCA1-201ENST00000352993 CFHR3Q02985 330 aa5.5□□□□□ -1.53
BRCA1-201ENST00000352993 RBMY1FQ15415 496 aaKnown RBP5.5□□□□□ -1.53
BRCA1-201ENST00000352993 C11orf71Q6IPW1 123 aa5.5□□□□□ -1.53
BRCA1-201ENST00000352993 OVOL2Q9BRP0 275 aa5.5□□□□□ -1.53
BRCA1-201ENST00000352993 C22orf24Q9Y442 160 aa5.5□□□□□ -1.53
BRCA1-201ENST00000352993 K7EMT4 169 aa5.5□□□□□ -1.53
BRCA1-201ENST00000352993 OXTP01178 125 aa5.5□□□□□ -1.53
BRCA1-201ENST00000352993 IGHV4-38-2P0DP08 117 aa5.5□□□□□ -1.53
BRCA1-201ENST00000352993 KHDC1LQ5JSQ8 128 aa5.5□□□□□ -1.53
BRCA1-201ENST00000352993 C10orf99Q6UWK7 81 aa5.5□□□□□ -1.53
BRCA1-201ENST00000352993 LINC01561Q8N1V8 128 aa5.5□□□□□ -1.53
BRCA1-201ENST00000352993 LINC00337Q8N6G1 96 aa5.5□□□□□ -1.53
BRCA1-201ENST00000352993 LMO4P61968 165 aa5.5□□□□□ -1.53
BRCA1-201ENST00000352993 CEP295Q9C0D2 2601 aa5.49□□□□□ -1.53
BRCA1-201ENST00000352993 H3BUA1 57 aa5.49□□□□□ -1.53
BRCA1-201ENST00000352993 RPL28P46779 137 aaKnown RBP5.49□□□□□ -1.53
BRCA1-201ENST00000352993 C1orf43Q9BWL3 253 aa5.49□□□□□ -1.53
BRCA1-201ENST00000352993 MAP1AP78559 2803 aaPredicted RBP5.49□□□□□ -1.53
BRCA1-201ENST00000352993 UCNP55089 124 aa5.49□□□□□ -1.53
BRCA1-201ENST00000352993 FHL2Q14192 279 aa5.49□□□□□ -1.53
BRCA1-201ENST00000352993 ENHOQ6UWT2 76 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms