RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 UQCR10Q9UDW1 63 aa13.03□□□□□ -0.32
PTN-201ENST00000348225 CSDC2Q9Y534 153 aaKnown RBP13.03□□□□□ -0.32
PTN-201ENST00000348225 MRPL23Q16540 153 aaKnown RBP13.02□□□□□ -0.32
PTN-201ENST00000348225 AMMECR1LQ6DCA0 310 aa13.02□□□□□ -0.32
PTN-201ENST00000348225 C2orf88Q9BSF0 95 aa13.02□□□□□ -0.32
PTN-201ENST00000348225 ICOSQ9Y6W8 199 aa13.02□□□□□ -0.32
PTN-201ENST00000348225 IGLV4-69A0A075B6H9 119 aa13.02□□□□□ -0.33
PTN-201ENST00000348225 ANKRD39Q53RE8 183 aa13.02□□□□□ -0.33
PTN-201ENST00000348225 Q6ZTC4 211 aa13.02□□□□□ -0.33
PTN-201ENST00000348225 Q6ZUT4 128 aa13.02□□□□□ -0.33
PTN-201ENST00000348225 TMEM101Q96IK0 257 aa13.02□□□□□ -0.33
PTN-201ENST00000348225 FAM104AQ969W3 186 aa13.01□□□□□ -0.33
PTN-201ENST00000348225 CHCHD5Q9BSY4 110 aa13.01□□□□□ -0.33
PTN-201ENST00000348225 H3BNG1 76 aa13□□□□□ -0.33
PTN-201ENST00000348225 ZNF25P17030 456 aaPredicted RBP13□□□□□ -0.33
PTN-201ENST00000348225 OR5A1Q8NGJ0 315 aa13□□□□□ -0.33
PTN-201ENST00000348225 C14orf144Q96I85 54 aa13□□□□□ -0.33
PTN-201ENST00000348225 A0A096LPF7 62 aa12.99□□□□□ -0.33
PTN-201ENST00000348225 C11orf86A6NJI1 115 aa12.99□□□□□ -0.33
PTN-201ENST00000348225 NANOS2P60321 138 aaKnown RBP12.99□□□□□ -0.33
PTN-201ENST00000348225 NFE4Q86UQ8 179 aa12.99□□□□□ -0.33
PTN-201ENST00000348225 GAGE6Q13070 117 aa12.98□□□□□ -0.33
PTN-201ENST00000348225 RNASE13Q5GAN3 156 aaKnown RBP12.98□□□□□ -0.33
PTN-201ENST00000348225 CHAC1Q9BUX1 264 aa12.98□□□□□ -0.33
PTN-201ENST00000348225 LINC00587B1AMM8 73 aa12.97□□□□□ -0.33
PTN-201ENST00000348225 COX8AP10176 69 aa12.97□□□□□ -0.33
PTN-201ENST00000348225 SLC25A34Q6PIV7 304 aa12.97□□□□□ -0.33
PTN-201ENST00000348225 NMUP48645 174 aa12.96□□□□□ -0.33
PTN-201ENST00000348225 TCTAP57738 103 aa12.96□□□□□ -0.33
PTN-201ENST00000348225 HERVK_113P61574 105 aa12.96□□□□□ -0.33
PTN-201ENST00000348225 B9D2Q9BPU9 175 aa12.96□□□□□ -0.33
PTN-201ENST00000348225 CDC42SE2Q9NRR3 84 aa12.96□□□□□ -0.33
PTN-201ENST00000348225 DNHD1Q96M86 4753 aa12.96□□□□□ -0.34
PTN-201ENST00000348225 DEFB131BA0A096LNP1 70 aa12.95□□□□□ -0.34
PTN-201ENST00000348225 HUWE1Q7Z6Z7 4374 aaKnown RBP12.95□□□□□ -0.34
PTN-201ENST00000348225 TENM3Q9P273 2699 aa12.95□□□□□ -0.34
PTN-201ENST00000348225 A0A0J9YXV3 536 aa12.95□□□□□ -0.34
PTN-201ENST00000348225 HNRNPA3P51991 378 aaKnown RBP12.95□□□□□ -0.34
PTN-201ENST00000348225 TMEM170BQ5T4T1 132 aa12.95□□□□□ -0.34
PTN-201ENST00000348225 TINCRA0A1B0GVN0 87 aa12.93□□□□□ -0.34
PTN-201ENST00000348225 UBE2D1P51668 147 aa12.93□□□□□ -0.34
PTN-201ENST00000348225 DEFA6Q01524 100 aa12.93□□□□□ -0.34
PTN-201ENST00000348225 TRAV10A0A0B4J240 114 aa12.92□□□□□ -0.34
PTN-201ENST00000348225 E9PLD3 99 aa12.92□□□□□ -0.34
PTN-201ENST00000348225 TMEM262E9PQX1 116 aa12.92□□□□□ -0.34
PTN-201ENST00000348225 IGKV2D-26A0A0A0MRZ7 120 aa12.91□□□□□ -0.34
PTN-201ENST00000348225 SEC11AP67812 179 aa12.91□□□□□ -0.34
PTN-201ENST00000348225 LELP1Q5T871 98 aa12.91□□□□□ -0.34
PTN-201ENST00000348225 A0A1B0GUV1 79 aa12.91□□□□□ -0.34
PTN-201ENST00000348225 DLEU1O43261 78 aa12.91□□□□□ -0.34
PTN-201ENST00000348225 ZNF22P17026 224 aaPredicted RBP12.91□□□□□ -0.34
PTN-201ENST00000348225 TIRAPP58753 221 aa12.91□□□□□ -0.34
PTN-201ENST00000348225 BOD1L2Q8IYS8 172 aa12.91□□□□□ -0.34
PTN-201ENST00000348225 GEMIN7Q9H840 131 aaKnown RBP12.91□□□□□ -0.34
PTN-201ENST00000348225 LCE2DQ5TA82 110 aaPredicted RBP12.9□□□□□ -0.34
PTN-201ENST00000348225 FAM19A3Q7Z5A8 133 aa12.9□□□□□ -0.34
PTN-201ENST00000348225 IGLV4-60A0A075B6I1 120 aa12.89□□□□□ -0.35
PTN-201ENST00000348225 PCP2Q8IVA1 136 aa12.89□□□□□ -0.35
PTN-201ENST00000348225 TMEM223A0PJW6 202 aa12.88□□□□□ -0.35
PTN-201ENST00000348225 RBX1P62877 108 aa12.88□□□□□ -0.35
PTN-201ENST00000348225 HERVK_113P63121 156 aa12.88□□□□□ -0.35
PTN-201ENST00000348225 MRPS16Q9Y3D3 137 aaKnown RBP12.88□□□□□ -0.35
PTN-201ENST00000348225 TRAV13-1A0A0B4J241 112 aa12.88□□□□□ -0.35
PTN-201ENST00000348225 MPV17L2Q567V2 206 aa12.88□□□□□ -0.35
PTN-201ENST00000348225 LYPD5Q6UWN5 251 aa12.88□□□□□ -0.35
PTN-201ENST00000348225 DNAH9Q9NYC9 4486 aa12.87□□□□□ -0.35
PTN-201ENST00000348225 TRAV8-6A0A0B4J262 113 aa12.87□□□□□ -0.35
PTN-201ENST00000348225 NHLRC4P0CG21 123 aaPredicted RBP12.87□□□□□ -0.35
PTN-201ENST00000348225 LINC00469Q8N7U9 141 aa12.87□□□□□ -0.35
PTN-201ENST00000348225 TP73-AS1Q9UF72 201 aa12.87□□□□□ -0.35
PTN-201ENST00000348225 H3BRM9 83 aa12.86□□□□□ -0.35
PTN-201ENST00000348225 CTAG1AP78358 180 aa12.86□□□□□ -0.35
PTN-201ENST00000348225 LINC00242Q5T6M2 205 aa12.86□□□□□ -0.35
PTN-201ENST00000348225 IGLV5-45A0A087WSX0 123 aa12.85□□□□□ -0.35
PTN-201ENST00000348225 SIVA1O15304 175 aa12.85□□□□□ -0.35
PTN-201ENST00000348225 C15orf53Q8NAA6 179 aa12.84□□□□□ -0.35
PTN-201ENST00000348225 LEPROTO15243 131 aa12.84□□□□□ -0.35
PTN-201ENST00000348225 TTTY13Q9BZ97 58 aa12.84□□□□□ -0.35
PTN-201ENST00000348225 PLEKHB2Q96CS7 222 aa12.83□□□□□ -0.36
PTN-201ENST00000348225 IGKV3OR2-268A0A0C4DH90 116 aa12.82□□□□□ -0.36
PTN-201ENST00000348225 MYMXA0A1B0GTQ4 84 aa12.82□□□□□ -0.36
PTN-201ENST00000348225 C2orf91Q6ZV80 131 aa12.82□□□□□ -0.36
PTN-201ENST00000348225 CDKN2A-AS1Q9UH64 79 aa12.82□□□□□ -0.36
PTN-201ENST00000348225 J3QQQ9 107 aa12.81□□□□□ -0.36
PTN-201ENST00000348225 M0R143 59 aa12.81□□□□□ -0.36
PTN-201ENST00000348225 LGALS3P17931 250 aaKnown RBP12.81□□□□□ -0.36
PTN-201ENST00000348225 COX6A2Q02221 97 aa12.81□□□□□ -0.36
PTN-201ENST00000348225 IGHV1-58A0A0C4DH39 117 aa12.8□□□□□ -0.36
PTN-201ENST00000348225 ZNF815PA8K554 130 aa12.8□□□□□ -0.36
PTN-201ENST00000348225 MAPKAPK5-AS1Q8N8E1 139 aa12.8□□□□□ -0.36
PTN-201ENST00000348225 IGHV3-64A0A075B6Q5 118 aa12.8□□□□□ -0.36
PTN-201ENST00000348225 LINC00959A0A1B0GUT2 108 aa12.8□□□□□ -0.36
PTN-201ENST00000348225 CCL25O15444 150 aa12.8□□□□□ -0.36
PTN-201ENST00000348225 ANGP03950 147 aaKnown RBP12.8□□□□□ -0.36
PTN-201ENST00000348225 SPINK8P0C7L1 97 aa12.79□□□□□ -0.36
PTN-201ENST00000348225 SS18Q15532 418 aa12.79□□□□□ -0.36
PTN-201ENST00000348225 HIGD1BQ9P298 99 aa12.79□□□□□ -0.36
PTN-201ENST00000348225 IGHV3-30-3P0DP02 117 aa12.78□□□□□ -0.36
PTN-201ENST00000348225 TSPEAR-AS2P59090 65 aa12.78□□□□□ -0.36
PTN-201ENST00000348225 ESRGQ1W209 222 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms