RNA–Protein interactions for RNA: ENST00000347616.5

CNTN1-201, Transcript of contactin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTN1, Length 5,507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN1-201ENST00000347616 FHL3Q13643 280 aa3.34□□□□□ -1.87
CNTN1-201ENST00000347616 Q6ZSV7 163 aa3.34□□□□□ -1.87
CNTN1-201ENST00000347616 MYO18BQ8IUG5 2567 aa3.34□□□□□ -1.88
CNTN1-201ENST00000347616 NDUFA1O15239 70 aa3.34□□□□□ -1.88
CNTN1-201ENST00000347616 PAX4O43316 350 aa3.34□□□□□ -1.88
CNTN1-201ENST00000347616 TIMM17BO60830 172 aa3.34□□□□□ -1.88
CNTN1-201ENST00000347616 MRPL23Q16540 153 aaKnown RBP3.34□□□□□ -1.88
CNTN1-201ENST00000347616 LINC00308Q8TCZ7 52 aa3.34□□□□□ -1.88
CNTN1-201ENST00000347616 TRAV13-2A0A0B4J235 113 aa3.33□□□□□ -1.88
CNTN1-201ENST00000347616 RBMY1BA6NDE4 496 aaKnown RBP3.33□□□□□ -1.88
CNTN1-201ENST00000347616 RBMY1EA6NEQ0 496 aaKnown RBP3.33□□□□□ -1.88
CNTN1-201ENST00000347616 RBMY1DP0C7P1 496 aaKnown RBP3.33□□□□□ -1.88
CNTN1-201ENST00000347616 RBMY1A1P0DJD3 496 aaKnown RBP3.33□□□□□ -1.88
CNTN1-201ENST00000347616 RBMY1CP0DJD4 496 aa3.33□□□□□ -1.88
CNTN1-201ENST00000347616 TIRAPP58753 221 aa3.33□□□□□ -1.88
CNTN1-201ENST00000347616 HERV-K104P63124 156 aa3.33□□□□□ -1.88
CNTN1-201ENST00000347616 CCDC168Q8NDH2 2452 aa3.33□□□□□ -1.88
CNTN1-201ENST00000347616 COX7A2LO14548 114 aa3.33□□□□□ -1.88
CNTN1-201ENST00000347616 CFHR3Q02985 330 aa3.33□□□□□ -1.88
CNTN1-201ENST00000347616 C9orf153Q5TBE3 101 aa3.33□□□□□ -1.88
CNTN1-201ENST00000347616 SMIM20Q8N5G0 67 aa3.33□□□□□ -1.88
CNTN1-201ENST00000347616 OVOL2Q9BRP0 275 aa3.33□□□□□ -1.88
CNTN1-201ENST00000347616 FAM236AA0A1B0GUQ0 79 aa3.33□□□□□ -1.88
CNTN1-201ENST00000347616 FAM236BA0A1B0GV22 79 aa3.33□□□□□ -1.88
CNTN1-201ENST00000347616 CRLF1O75462 422 aa3.33□□□□□ -1.88
CNTN1-201ENST00000347616 MAP6D1Q9H9H5 199 aa3.33□□□□□ -1.88
CNTN1-201ENST00000347616 PIEZO1Q92508 2521 aa3.33□□□□□ -1.88
CNTN1-201ENST00000347616 Q6Q795 121 aa3.33□□□□□ -1.88
CNTN1-201ENST00000347616 CCDC179H3BU77 68 aa3.33□□□□□ -1.88
CNTN1-201ENST00000347616 CHCHD7Q9BUK0 85 aa3.33□□□□□ -1.88
CNTN1-201ENST00000347616 K7EQD1 137 aa3.32□□□□□ -1.88
CNTN1-201ENST00000347616 PFN2P35080 140 aa3.32□□□□□ -1.88
CNTN1-201ENST00000347616 DAZ2Q13117 558 aaKnown RBP3.32□□□□□ -1.88
CNTN1-201ENST00000347616 DAZ4Q86SG3 579 aaKnown RBP3.32□□□□□ -1.88
CNTN1-201ENST00000347616 C11orf68Q9H3H3 251 aaKnown RBP3.32□□□□□ -1.88
CNTN1-201ENST00000347616 DAZ3Q9NR90 486 aaKnown RBP3.32□□□□□ -1.88
CNTN1-201ENST00000347616 POLQO75417 2590 aa3.32□□□□□ -1.88
CNTN1-201ENST00000347616 LRBAP50851 2863 aa3.32□□□□□ -1.88
CNTN1-201ENST00000347616 RPL35AP18077 110 aaKnown RBP3.32□□□□□ -1.88
CNTN1-201ENST00000347616 C6orf226Q5I0X4 101 aa3.32□□□□□ -1.88
CNTN1-201ENST00000347616 CITED1Q99966 193 aa3.32□□□□□ -1.88
CNTN1-201ENST00000347616 NOP10Q9NPE3 64 aaKnown RBP3.32□□□□□ -1.88
CNTN1-201ENST00000347616 RNASE1P07998 156 aaKnown RBP3.32□□□□□ -1.88
CNTN1-201ENST00000347616 PIK3CD-AS1Q5SR53 167 aa3.32□□□□□ -1.88
CNTN1-201ENST00000347616 TMEM86BQ8N661 226 aa3.32□□□□□ -1.88
CNTN1-201ENST00000347616 C3orf56Q8N813 242 aa3.32□□□□□ -1.88
CNTN1-201ENST00000347616 SND1-IT1Q9HBX3 110 aa3.32□□□□□ -1.88
CNTN1-201ENST00000347616 TRBV10-1A0A0K0K1A3 114 aa3.32□□□□□ -1.88
CNTN1-201ENST00000347616 LINC00643Q86TS7 51 aa3.32□□□□□ -1.88
CNTN1-201ENST00000347616 FAM240AA0A1B0GVK7 77 aa3.31□□□□□ -1.88
CNTN1-201ENST00000347616 RS1O15537 224 aa3.31□□□□□ -1.88
CNTN1-201ENST00000347616 Q6ZSN1 163 aa3.31□□□□□ -1.88
CNTN1-201ENST00000347616 EDA2RQ9HAV5 297 aa3.31□□□□□ -1.88
CNTN1-201ENST00000347616 CMC4P56277 68 aaPredicted RBP3.31□□□□□ -1.88
CNTN1-201ENST00000347616 RBMY1FQ15415 496 aaKnown RBP3.31□□□□□ -1.88
CNTN1-201ENST00000347616 MIR7-3HGQ8N6C7 128 aa3.31□□□□□ -1.88
CNTN1-201ENST00000347616 MAP1AP78559 2803 aaPredicted RBP3.31□□□□□ -1.88
CNTN1-201ENST00000347616 TRACP01848 142 aa3.31□□□□□ -1.88
CNTN1-201ENST00000347616 DEFB114Q30KQ6 69 aa3.31□□□□□ -1.88
CNTN1-201ENST00000347616 LINC00242Q5T6M2 205 aa3.31□□□□□ -1.88
CNTN1-201ENST00000347616 Q6ZTI0 123 aa3.31□□□□□ -1.88
CNTN1-201ENST00000347616 C18orf65Q6ZTR6 163 aa3.31□□□□□ -1.88
CNTN1-201ENST00000347616 COX7B2Q8TF08 81 aa3.31□□□□□ -1.88
CNTN1-201ENST00000347616 ZNF702PQ9H963 129 aa3.31□□□□□ -1.88
CNTN1-201ENST00000347616 Q9HAA7 133 aa3.31□□□□□ -1.88
CNTN1-201ENST00000347616 Q9UF83 564 aa3.31□□□□□ -1.88
CNTN1-201ENST00000347616 HIST2H2BCQ6DN03 193 aa3.3□□□□□ -1.88
CNTN1-201ENST00000347616 HIST2H2BDQ6DRA6 164 aa3.3□□□□□ -1.88
CNTN1-201ENST00000347616 Q6YL49 198 aa3.3□□□□□ -1.88
CNTN1-201ENST00000347616 C5orf38Q86SI9 138 aa3.3□□□□□ -1.88
CNTN1-201ENST00000347616 LITAFQ99732 161 aa3.3□□□□□ -1.88
CNTN1-201ENST00000347616 LRRK2Q5S007 2527 aa3.3□□□□□ -1.88
CNTN1-201ENST00000347616 EIF4EBP3O60516 100 aaPredicted RBP3.3□□□□□ -1.88
CNTN1-201ENST00000347616 NDUFA7O95182 113 aa3.3□□□□□ -1.88
CNTN1-201ENST00000347616 PF4P02776 101 aa3.3□□□□□ -1.88
CNTN1-201ENST00000347616 COX6A2Q02221 97 aa3.3□□□□□ -1.88
CNTN1-201ENST00000347616 C4orf3Q8WVX3 66 aa3.3□□□□□ -1.88
CNTN1-201ENST00000347616 DOPEY1Q5JWR5 2465 aa3.3□□□□□ -1.88
CNTN1-201ENST00000347616 DEFB130BP0DP73 79 aa3.3□□□□□ -1.88
CNTN1-201ENST00000347616 DEFB130AP0DP74 79 aa3.3□□□□□ -1.88
CNTN1-201ENST00000347616 CFAP161Q6P656 301 aa3.3□□□□□ -1.88
CNTN1-201ENST00000347616 SMIM1B2RUZ4 78 aa3.3□□□□□ -1.88
CNTN1-201ENST00000347616 H0YGX0 51 aa3.3□□□□□ -1.88
CNTN1-201ENST00000347616 TMEM126AQ9H061 195 aa3.3□□□□□ -1.88
CNTN1-201ENST00000347616 PRORYQ9H606 182 aa3.3□□□□□ -1.88
CNTN1-201ENST00000347616 ABCA2Q9BZC7 2435 aa3.29□□□□□ -1.88
CNTN1-201ENST00000347616 CCL24O00175 119 aa3.29□□□□□ -1.88
CNTN1-201ENST00000347616 MALP21145 153 aa3.29□□□□□ -1.88
CNTN1-201ENST00000347616 HIST1H4AP62805 103 aaKnown RBP3.29□□□□□ -1.88
CNTN1-201ENST00000347616 IMUPQ9GZP8 106 aa3.29□□□□□ -1.88
CNTN1-201ENST00000347616 TRAV25A0A0B4J276 109 aa3.29□□□□□ -1.88
CNTN1-201ENST00000347616 LINC00694P0DN24 101 aa3.29□□□□□ -1.88
CNTN1-201ENST00000347616 SS18Q15532 418 aa3.29□□□□□ -1.88
CNTN1-201ENST00000347616 ANKRD17O75179 2603 aaKnown RBP3.29□□□□□ -1.88
CNTN1-201ENST00000347616 BEAN1Q3B7T3 259 aa3.29□□□□□ -1.88
CNTN1-201ENST00000347616 FN1P02751 2386 aaKnown RBP3.29□□□□□ -1.88
CNTN1-201ENST00000347616 LECT2O14960 151 aa3.29□□□□□ -1.88
CNTN1-201ENST00000347616 Q96MF0 132 aa3.29□□□□□ -1.88
CNTN1-201ENST00000347616 JMJD1CQ15652 2540 aa3.29□□□□□ -1.88
CNTN1-201ENST00000347616 IGKV3D-7A0A0C4DH55 119 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms