RNA–Protein interactions for RNA: ENST00000347055.3

KRCC1-201, Transcript of lysine rich coiled-coil 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRCC1, Length 1,753 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1-201ENST00000347055 HIST2H2BCQ6DN03 193 aa13.08□□□□□ -0.32
KRCC1-201ENST00000347055 HIST2H2BDQ6DRA6 164 aa13.08□□□□□ -0.32
KRCC1-201ENST00000347055 PRIMA1Q86XR5 153 aa13.08□□□□□ -0.32
KRCC1-201ENST00000347055 GVINP1Q7Z2Y8 2422 aa13.08□□□□□ -0.32
KRCC1-201ENST00000347055 AVPP01185 164 aa13.07□□□□□ -0.32
KRCC1-201ENST00000347055 C10orf99Q6UWK7 81 aa13.07□□□□□ -0.32
KRCC1-201ENST00000347055 SOSTDC1Q6X4U4 206 aa13.07□□□□□ -0.32
KRCC1-201ENST00000347055 VPREB3Q9UKI3 123 aa13.07□□□□□ -0.32
KRCC1-201ENST00000347055 IL17DQ8TAD2 202 aa13.07□□□□□ -0.32
KRCC1-201ENST00000347055 Q9UF83 564 aa13.07□□□□□ -0.32
KRCC1-201ENST00000347055 F5H768 121 aa13.06□□□□□ -0.32
KRCC1-201ENST00000347055 LINC00526Q96FQ7 95 aa13.06□□□□□ -0.32
KRCC1-201ENST00000347055 MED13LQ71F56 2210 aa13.06□□□□□ -0.32
KRCC1-201ENST00000347055 IGHV3-38A0A0C4DH36 116 aa13.05□□□□□ -0.32
KRCC1-201ENST00000347055 RPL36AP83881 106 aaKnown RBP13.05□□□□□ -0.32
KRCC1-201ENST00000347055 SMCR5Q8TEV8 140 aa13.05□□□□□ -0.32
KRCC1-201ENST00000347055 RPL36ALQ969Q0 106 aaKnown RBP13.05□□□□□ -0.32
KRCC1-201ENST00000347055 DOPEY2Q9Y3R5 2298 aa13.05□□□□□ -0.32
KRCC1-201ENST00000347055 LINC01356Q8N9X3 169 aa13.04□□□□□ -0.32
KRCC1-201ENST00000347055 ZNF702PQ9H963 129 aa13.04□□□□□ -0.32
KRCC1-201ENST00000347055 MAP6D1Q9H9H5 199 aa13.04□□□□□ -0.32
KRCC1-201ENST00000347055 SPTBN1Q01082 2364 aaKnown RBP13.04□□□□□ -0.32
KRCC1-201ENST00000347055 Q8N2B8 174 aa13.04□□□□□ -0.32
KRCC1-201ENST00000347055 CDC42SE2Q9NRR3 84 aa13.03□□□□□ -0.32
KRCC1-201ENST00000347055 RIF1Q5UIP0 2472 aaKnown RBP13.03□□□□□ -0.32
KRCC1-201ENST00000347055 NDUFA7O95182 113 aa13.02□□□□□ -0.32
KRCC1-201ENST00000347055 CRPP02741 224 aa13.02□□□□□ -0.32
KRCC1-201ENST00000347055 MALP21145 153 aa13.02□□□□□ -0.32
KRCC1-201ENST00000347055 HIST1H4AP62805 103 aaKnown RBP13.02□□□□□ -0.32
KRCC1-201ENST00000347055 C9orf153Q5TBE3 101 aa13.02□□□□□ -0.32
KRCC1-201ENST00000347055 C22orf24Q9Y442 160 aa13.02□□□□□ -0.32
KRCC1-201ENST00000347055 ZFHX2Q9C0A1 2572 aaPredicted RBP13.02□□□□□ -0.33
KRCC1-201ENST00000347055 K7EQD1 137 aa13.02□□□□□ -0.33
KRCC1-201ENST00000347055 H0YGX0 51 aa13.01□□□□□ -0.33
KRCC1-201ENST00000347055 ATOX1O00244 68 aa13.01□□□□□ -0.33
KRCC1-201ENST00000347055 CFAP161Q6P656 301 aa13□□□□□ -0.33
KRCC1-201ENST00000347055 Q6YL49 198 aa12.99□□□□□ -0.33
KRCC1-201ENST00000347055 COX7CP15954 63 aa12.99□□□□□ -0.33
KRCC1-201ENST00000347055 SPTA1P02549 2419 aa12.98□□□□□ -0.33
KRCC1-201ENST00000347055 TRAV25A0A0B4J276 109 aa12.98□□□□□ -0.33
KRCC1-201ENST00000347055 A0A1B0GX51 115 aa12.98□□□□□ -0.33
KRCC1-201ENST00000347055 LINC00694P0DN24 101 aa12.98□□□□□ -0.33
KRCC1-201ENST00000347055 GNLYP22749 145 aa12.98□□□□□ -0.33
KRCC1-201ENST00000347055 SLURP1P55000 103 aa12.98□□□□□ -0.33
KRCC1-201ENST00000347055 C4orf3Q8WVX3 66 aa12.98□□□□□ -0.33
KRCC1-201ENST00000347055 OBSCN-AS1Q96MR7 158 aa12.98□□□□□ -0.33
KRCC1-201ENST00000347055 FAM218AQ96MZ4 157 aa12.98□□□□□ -0.33
KRCC1-201ENST00000347055 TRAV13-1A0A0B4J241 112 aa12.97□□□□□ -0.33
KRCC1-201ENST00000347055 FSHBP01225 129 aa12.97□□□□□ -0.33
KRCC1-201ENST00000347055 DYNLRB2Q8TF09 96 aa12.97□□□□□ -0.33
KRCC1-201ENST00000347055 CRYGAP11844 174 aa12.97□□□□□ -0.33
KRCC1-201ENST00000347055 DNAL4O96015 105 aa12.96□□□□□ -0.34
KRCC1-201ENST00000347055 NTM-AS1Q6ZSK4 140 aa12.96□□□□□ -0.34
KRCC1-201ENST00000347055 TMEM243Q9BU79 118 aa12.96□□□□□ -0.34
KRCC1-201ENST00000347055 DEFB114Q30KQ6 69 aa12.95□□□□□ -0.34
KRCC1-201ENST00000347055 Q6JHZ5 121 aa12.95□□□□□ -0.34
KRCC1-201ENST00000347055 LRRC75A-AS1Q8N1F1 130 aa12.95□□□□□ -0.34
KRCC1-201ENST00000347055 COX7B2Q8TF08 81 aa12.95□□□□□ -0.34
KRCC1-201ENST00000347055 COL6A6A6NMZ7 2263 aa12.95□□□□□ -0.34
KRCC1-201ENST00000347055 A0A0U1RRA0 63 aa12.94□□□□□ -0.34
KRCC1-201ENST00000347055 PRM2P04554 102 aa12.94□□□□□ -0.34
KRCC1-201ENST00000347055 GAGE2AQ6NT46 116 aa12.94□□□□□ -0.34
KRCC1-201ENST00000347055 UBE2L6O14933 153 aa12.94□□□□□ -0.34
KRCC1-201ENST00000347055 SND1-IT1Q9HBX3 110 aa12.94□□□□□ -0.34
KRCC1-201ENST00000347055 TRGV1A0A0A0MS02 117 aa12.93□□□□□ -0.34
KRCC1-201ENST00000347055 HIVEP3Q5T1R4 2406 aa12.92□□□□□ -0.34
KRCC1-201ENST00000347055 IBA57-AS1B1ANH7 110 aa12.92□□□□□ -0.34
KRCC1-201ENST00000347055 A0A096LNT2 108 aa12.92□□□□□ -0.34
KRCC1-201ENST00000347055 C1orf158Q8N1D5 194 aa12.92□□□□□ -0.34
KRCC1-201ENST00000347055 LINC00337Q8N6G1 96 aa12.92□□□□□ -0.34
KRCC1-201ENST00000347055 C2orf48Q96LS8 159 aa12.92□□□□□ -0.34
KRCC1-201ENST00000347055 IGKV2-28A0A075B6P5 120 aa12.91□□□□□ -0.34
KRCC1-201ENST00000347055 IGKV2D-28P01615 120 aa12.91□□□□□ -0.34
KRCC1-201ENST00000347055 RPS28P62857 69 aaKnown RBP12.91□□□□□ -0.34
KRCC1-201ENST00000347055 MIR7-3HGQ8N6C7 128 aa12.91□□□□□ -0.34
KRCC1-201ENST00000347055 NRGNQ92686 78 aa12.91□□□□□ -0.34
KRCC1-201ENST00000347055 KLK5Q9Y337 293 aaPredicted RBP12.91□□□□□ -0.34
KRCC1-201ENST00000347055 STHQ8IWL8 128 aa12.9□□□□□ -0.34
KRCC1-201ENST00000347055 Q96MF0 132 aa12.9□□□□□ -0.34
KRCC1-201ENST00000347055 CEP295Q9C0D2 2601 aa12.9□□□□□ -0.34
KRCC1-201ENST00000347055 J3KT08 172 aa12.89□□□□□ -0.35
KRCC1-201ENST00000347055 RPL18AQ02543 176 aaKnown RBP12.89□□□□□ -0.35
KRCC1-201ENST00000347055 SMIM11BQ8TCY0 68 aa12.89□□□□□ -0.35
KRCC1-201ENST00000347055 CMC4P56277 68 aaPredicted RBP12.88□□□□□ -0.35
KRCC1-201ENST00000347055 DEFB136Q30KP8 78 aa12.88□□□□□ -0.35
KRCC1-201ENST00000347055 TRBV6-4A0A1B0GX49 114 aa12.87□□□□□ -0.35
KRCC1-201ENST00000347055 ODF3L2Q3SX64 289 aa12.87□□□□□ -0.35
KRCC1-201ENST00000347055 Q9HAA7 133 aa12.87□□□□□ -0.35
KRCC1-201ENST00000347055 XCL2Q9UBD3 114 aa12.87□□□□□ -0.35
KRCC1-201ENST00000347055 MUC6Q6W4X9 2439 aa12.86□□□□□ -0.35
KRCC1-201ENST00000347055 SPTAN1Q13813 2472 aaKnown RBP12.86□□□□□ -0.35
KRCC1-201ENST00000347055 LY6G6DO95868 133 aa12.86□□□□□ -0.35
KRCC1-201ENST00000347055 C18orf65Q6ZTR6 163 aa12.86□□□□□ -0.35
KRCC1-201ENST00000347055 S100A7L2Q5SY68 101 aa12.85□□□□□ -0.35
KRCC1-201ENST00000347055 A0A087WYN8 130 aa12.84□□□□□ -0.35
KRCC1-201ENST00000347055 CCL18P55774 89 aa12.84□□□□□ -0.35
KRCC1-201ENST00000347055 ATP5EP2Q5VTU8 51 aa12.84□□□□□ -0.35
KRCC1-201ENST00000347055 Q6ZTI0 123 aa12.84□□□□□ -0.35
KRCC1-201ENST00000347055 C16orf74Q96GX8 76 aa12.84□□□□□ -0.35
KRCC1-201ENST00000347055 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms