RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 CITED2Q99967 270 aaPredicted RBP12.93□□□□□ -0.34
VHL-202ENST00000345392 DEFB112Q30KQ8 113 aa12.92□□□□□ -0.34
VHL-202ENST00000345392 HIST2H2BDQ6DRA6 164 aa12.92□□□□□ -0.34
VHL-202ENST00000345392 SMIM20Q8N5G0 67 aa12.92□□□□□ -0.34
VHL-202ENST00000345392 C3orf56Q8N813 242 aa12.92□□□□□ -0.34
VHL-202ENST00000345392 MEIG1Q5JSS6 88 aa12.91□□□□□ -0.34
VHL-202ENST00000345392 YAE1D1Q9NRH1 226 aa12.91□□□□□ -0.34
VHL-202ENST00000345392 MYO9AB2RTY4 2548 aa12.9□□□□□ -0.34
VHL-202ENST00000345392 TMEM101Q96IK0 257 aa12.9□□□□□ -0.34
VHL-202ENST00000345392 SPANXA1Q9NS26 97 aa12.9□□□□□ -0.34
VHL-202ENST00000345392 PLA2G2AP14555 144 aa12.89□□□□□ -0.35
VHL-202ENST00000345392 COX6A2Q02221 97 aa12.89□□□□□ -0.35
VHL-202ENST00000345392 ABCA12Q86UK0 2595 aa12.89□□□□□ -0.35
VHL-202ENST00000345392 TLN2Q9Y4G6 2542 aa12.89□□□□□ -0.35
VHL-202ENST00000345392 DEFB121Q5J5C9 76 aa12.89□□□□□ -0.35
VHL-202ENST00000345392 HIST2H2BCQ6DN03 193 aa12.88□□□□□ -0.35
VHL-202ENST00000345392 EDA2RQ9HAV5 297 aa12.88□□□□□ -0.35
VHL-202ENST00000345392 FAM240AA0A1B0GVK7 77 aa12.88□□□□□ -0.35
VHL-202ENST00000345392 DEFB131AP59861 70 aa12.88□□□□□ -0.35
VHL-202ENST00000345392 MRPL23Q16540 153 aaKnown RBP12.87□□□□□ -0.35
VHL-202ENST00000345392 Q9H8V8 135 aa12.87□□□□□ -0.35
VHL-202ENST00000345392 LINC00308Q8TCZ7 52 aa12.87□□□□□ -0.35
VHL-202ENST00000345392 Q8N2B8 174 aa12.86□□□□□ -0.35
VHL-202ENST00000345392 NDUFA1O15239 70 aa12.86□□□□□ -0.35
VHL-202ENST00000345392 HOXD3P31249 432 aaPredicted RBP12.86□□□□□ -0.35
VHL-202ENST00000345392 DEFB136Q30KP8 78 aa12.86□□□□□ -0.35
VHL-202ENST00000345392 TEX15Q9BXT5 2789 aa12.86□□□□□ -0.35
VHL-202ENST00000345392 PTPN13Q12923 2485 aa12.86□□□□□ -0.35
VHL-202ENST00000345392 RBMY1BA6NDE4 496 aaKnown RBP12.85□□□□□ -0.35
VHL-202ENST00000345392 RBMY1EA6NEQ0 496 aaKnown RBP12.85□□□□□ -0.35
VHL-202ENST00000345392 B4DSR2 109 aa12.85□□□□□ -0.35
VHL-202ENST00000345392 TIMM17BO60830 172 aa12.85□□□□□ -0.35
VHL-202ENST00000345392 RBMY1DP0C7P1 496 aaKnown RBP12.85□□□□□ -0.35
VHL-202ENST00000345392 HERV-K104P63124 156 aa12.85□□□□□ -0.35
VHL-202ENST00000345392 DGAT2L7PQ6IED9 249 aa12.85□□□□□ -0.35
VHL-202ENST00000345392 NBPF19A0A087WUL8 3843 aa12.85□□□□□ -0.35
VHL-202ENST00000345392 J3QKU1 62 aa12.85□□□□□ -0.35
VHL-202ENST00000345392 NDUFA7O95182 113 aa12.85□□□□□ -0.35
VHL-202ENST00000345392 CIRBPQ14011 172 aaKnown RBP12.85□□□□□ -0.35
VHL-202ENST00000345392 C18orf65Q6ZTR6 163 aa12.85□□□□□ -0.35
VHL-202ENST00000345392 C2CD3Q4AC94 2353 aa12.85□□□□□ -0.35
VHL-202ENST00000345392 ZNF469Q96JG9 3925 aaPredicted RBP12.84□□□□□ -0.35
VHL-202ENST00000345392 HECTD1Q9ULT8 2610 aa12.84□□□□□ -0.35
VHL-202ENST00000345392 SOSTDC1Q6X4U4 206 aa12.84□□□□□ -0.35
VHL-202ENST00000345392 AKAP9Q99996 3911 aa12.83□□□□□ -0.36
VHL-202ENST00000345392 IGHV3OR16-12A0A075B7B8 117 aa12.83□□□□□ -0.36
VHL-202ENST00000345392 TRBV7-7A0A0K0K1E9 115 aa12.83□□□□□ -0.36
VHL-202ENST00000345392 FAM236AA0A1B0GUQ0 79 aa12.83□□□□□ -0.36
VHL-202ENST00000345392 FAM236BA0A1B0GV22 79 aa12.83□□□□□ -0.36
VHL-202ENST00000345392 RNF152Q8N8N0 203 aa12.83□□□□□ -0.36
VHL-202ENST00000345392 SMCR5Q8TEV8 140 aa12.83□□□□□ -0.36
VHL-202ENST00000345392 NOTCH3Q9UM47 2321 aa12.82□□□□□ -0.36
VHL-202ENST00000345392 SHISA2Q6UWI4 295 aa12.82□□□□□ -0.36
VHL-202ENST00000345392 COX7A2LO14548 114 aa12.82□□□□□ -0.36
VHL-202ENST00000345392 TIRAPP58753 221 aa12.81□□□□□ -0.36
VHL-202ENST00000345392 ZNF415Q09FC8 603 aa12.81□□□□□ -0.36
VHL-202ENST00000345392 LINC01587Q99440 93 aa12.81□□□□□ -0.36
VHL-202ENST00000345392 LINC00242Q5T6M2 205 aa12.81□□□□□ -0.36
VHL-202ENST00000345392 IGLV5-45A0A087WSX0 123 aa12.8□□□□□ -0.36
VHL-202ENST00000345392 IGHV3-53P01767 116 aa12.8□□□□□ -0.36
VHL-202ENST00000345392 DAZ2Q13117 558 aaKnown RBP12.8□□□□□ -0.36
VHL-202ENST00000345392 DAZ4Q86SG3 579 aaKnown RBP12.8□□□□□ -0.36
VHL-202ENST00000345392 DAZ3Q9NR90 486 aaKnown RBP12.8□□□□□ -0.36
VHL-202ENST00000345392 SONP18583 2426 aaKnown RBP12.8□□□□□ -0.36
VHL-202ENST00000345392 TRAV13-1A0A0B4J241 112 aa12.8□□□□□ -0.36
VHL-202ENST00000345392 LINC00694P0DN24 101 aa12.8□□□□□ -0.36
VHL-202ENST00000345392 SLURP1P55000 103 aa12.8□□□□□ -0.36
VHL-202ENST00000345392 FAM110AQ9BQ89 295 aa12.8□□□□□ -0.36
VHL-202ENST00000345392 WNK1Q9H4A3 2382 aa12.79□□□□□ -0.36
VHL-202ENST00000345392 SETD2Q9BYW2 2564 aaPredicted RBP12.79□□□□□ -0.36
VHL-202ENST00000345392 NF1P21359 2839 aa12.78□□□□□ -0.36
VHL-202ENST00000345392 IGLV5-39A0A0G2JS06 123 aa12.78□□□□□ -0.36
VHL-202ENST00000345392 C11orf72Q8NBR9 251 aa12.78□□□□□ -0.36
VHL-202ENST00000345392 NIPBLQ6KC79 2804 aaeCLIP12.78□□□□□ -0.368e-7■■■□□ 15.3
VHL-202ENST00000345392 NAV2Q8IVL1 2488 aa12.78□□□□□ -0.36
VHL-202ENST00000345392 PRIMA1Q86XR5 153 aa12.77□□□□□ -0.36
VHL-202ENST00000345392 FAM218AQ96MZ4 157 aa12.77□□□□□ -0.36
VHL-202ENST00000345392 TMEM89A2RUT3 159 aa12.77□□□□□ -0.37
VHL-202ENST00000345392 BAALC-AS2P0C853 105 aa12.77□□□□□ -0.37
VHL-202ENST00000345392 PIK3CD-AS1Q5SR53 167 aa12.77□□□□□ -0.37
VHL-202ENST00000345392 SMIM1B2RUZ4 78 aa12.76□□□□□ -0.37
VHL-202ENST00000345392 HERVK_113P63121 156 aa12.76□□□□□ -0.37
VHL-202ENST00000345392 ACYP1P07311 99 aa12.75□□□□□ -0.37
VHL-202ENST00000345392 DNAJC30Q96LL9 226 aa12.75□□□□□ -0.37
VHL-202ENST00000345392 BEAN1Q3B7T3 259 aa12.75□□□□□ -0.37
VHL-202ENST00000345392 LINC01356Q8N9X3 169 aa12.75□□□□□ -0.37
VHL-202ENST00000345392 Q9HAA7 133 aa12.75□□□□□ -0.37
VHL-202ENST00000345392 C22orf24Q9Y442 160 aa12.75□□□□□ -0.37
VHL-202ENST00000345392 KHDC1LQ5JSQ8 128 aa12.74□□□□□ -0.37
VHL-202ENST00000345392 UBE2E2Q96LR5 201 aa12.73□□□□□ -0.37
VHL-202ENST00000345392 ZNF702PQ9H963 129 aa12.73□□□□□ -0.37
VHL-202ENST00000345392 RS1O15537 224 aa12.72□□□□□ -0.37
VHL-202ENST00000345392 KRTAP10-9P60411 292 aa12.72□□□□□ -0.37
VHL-202ENST00000345392 LINC00643Q86TS7 51 aa12.72□□□□□ -0.37
VHL-202ENST00000345392 XCL2Q9UBD3 114 aa12.72□□□□□ -0.37
VHL-202ENST00000345392 VPREB3Q9UKI3 123 aa12.72□□□□□ -0.37
VHL-202ENST00000345392 IMUPQ9GZP8 106 aa12.72□□□□□ -0.37
VHL-202ENST00000345392 A8MTW9 85 aa12.71□□□□□ -0.37
VHL-202ENST00000345392 NOTCH2Q04721 2471 aa12.71□□□□□ -0.37
VHL-202ENST00000345392 CCDC168Q8NDH2 2452 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms