RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 REG3AQ06141 175 aa10.56□□□□□ -0.72
ATG4B-201ENST00000344376 DEFB104AQ8WTQ1 72 aa10.56□□□□□ -0.72
ATG4B-201ENST00000344376 NCR2O95944 276 aa10.55□□□□□ -0.72
ATG4B-201ENST00000344376 RIGQ13278 110 aa10.55□□□□□ -0.72
ATG4B-201ENST00000344376 TMEM191AQ9H0A3 160 aa10.55□□□□□ -0.72
ATG4B-201ENST00000344376 NAT8BQ9UHF3 227 aa10.55□□□□□ -0.72
ATG4B-201ENST00000344376 SDHAF1A6NFY7 115 aa10.54□□□□□ -0.72
ATG4B-201ENST00000344376 APCSP02743 223 aa10.54□□□□□ -0.72
ATG4B-201ENST00000344376 ATP5L2Q7Z4Y8 100 aa10.54□□□□□ -0.72
ATG4B-201ENST00000344376 LINC00469Q8N7U9 141 aa10.54□□□□□ -0.72
ATG4B-201ENST00000344376 C20orf203Q8NBC4 194 aa10.54□□□□□ -0.72
ATG4B-201ENST00000344376 HIST1H2BLQ99880 126 aa10.54□□□□□ -0.72
ATG4B-201ENST00000344376 TRAV8-4A0A0B4J246 113 aa10.53□□□□□ -0.72
ATG4B-201ENST00000344376 USP17L23D6RBM5 183 aa10.53□□□□□ -0.72
ATG4B-201ENST00000344376 HAMPP81172 84 aa10.53□□□□□ -0.72
ATG4B-201ENST00000344376 Q5VSD8 79 aa10.53□□□□□ -0.72
ATG4B-201ENST00000344376 PACRGQ96M98 296 aaPredicted RBP10.53□□□□□ -0.72
ATG4B-201ENST00000344376 IGLV4-60A0A075B6I1 120 aa10.52□□□□□ -0.72
ATG4B-201ENST00000344376 JOSD1Q15040 202 aaPredicted RBP10.52□□□□□ -0.72
ATG4B-201ENST00000344376 AMMECR1LQ6DCA0 310 aa10.52□□□□□ -0.72
ATG4B-201ENST00000344376 NUP35Q8NFH5 326 aa10.52□□□□□ -0.72
ATG4B-201ENST00000344376 MRAP2Q96G30 205 aa10.52□□□□□ -0.72
ATG4B-201ENST00000344376 ST20Q9HBF5 79 aa10.52□□□□□ -0.72
ATG4B-201ENST00000344376 IGLV10-54A0A075B6I4 117 aa10.52□□□□□ -0.73
ATG4B-201ENST00000344376 TRBV6-5A0A0K0K1A5 114 aa10.52□□□□□ -0.73
ATG4B-201ENST00000344376 I3L3M4 83 aa10.52□□□□□ -0.73
ATG4B-201ENST00000344376 SMR3BP02814 79 aaPredicted RBP10.52□□□□□ -0.73
ATG4B-201ENST00000344376 FABP4P15090 132 aa10.52□□□□□ -0.73
ATG4B-201ENST00000344376 PMCHP20382 165 aa10.52□□□□□ -0.73
ATG4B-201ENST00000344376 FAM30AQ9NZY2 134 aa10.52□□□□□ -0.73
ATG4B-201ENST00000344376 FAM229AH3BQW9 127 aa10.51□□□□□ -0.73
ATG4B-201ENST00000344376 H7C423 109 aa10.51□□□□□ -0.73
ATG4B-201ENST00000344376 MRPL18Q9H0U6 180 aaKnown RBP10.51□□□□□ -0.73
ATG4B-201ENST00000344376 LINC01620Q4KN68 170 aa10.5□□□□□ -0.73
ATG4B-201ENST00000344376 TMEM136Q6ZRR5 245 aa10.5□□□□□ -0.73
ATG4B-201ENST00000344376 Q6ZSA8 131 aa10.5□□□□□ -0.73
ATG4B-201ENST00000344376 AMN1Q8IY45 258 aa10.5□□□□□ -0.73
ATG4B-201ENST00000344376 RAB4AP20338 218 aa10.49□□□□□ -0.73
ATG4B-201ENST00000344376 PDZD11Q5EBL8 140 aa10.49□□□□□ -0.73
ATG4B-201ENST00000344376 RNASEKQ6P5S7 137 aaKnown RBP10.49□□□□□ -0.73
ATG4B-201ENST00000344376 RNF185Q96GF1 192 aa10.49□□□□□ -0.73
ATG4B-201ENST00000344376 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.48□□□□□ -0.73
ATG4B-201ENST00000344376 IGKV2-29A2NJV5 120 aaPredicted RBP10.48□□□□□ -0.73
ATG4B-201ENST00000344376 TSTD3H0UI37 97 aa10.48□□□□□ -0.73
ATG4B-201ENST00000344376 PPP1R17O96001 155 aa10.48□□□□□ -0.73
ATG4B-201ENST00000344376 KRTAP26-1Q6PEX3 210 aa10.48□□□□□ -0.73
ATG4B-201ENST00000344376 A0A1B0GW15 77 aa10.48□□□□□ -0.73
ATG4B-201ENST00000344376 A0A1B0GXF2 115 aa10.48□□□□□ -0.73
ATG4B-201ENST00000344376 FGF6P10767 208 aa10.48□□□□□ -0.73
ATG4B-201ENST00000344376 C14orf144Q96I85 54 aa10.48□□□□□ -0.73
ATG4B-201ENST00000344376 GAS8-AS1O95177 125 aa10.47□□□□□ -0.73
ATG4B-201ENST00000344376 PRSS1P07477 247 aa10.47□□□□□ -0.73
ATG4B-201ENST00000344376 ZNF25P17030 456 aaPredicted RBP10.47□□□□□ -0.73
ATG4B-201ENST00000344376 DDTP30046 118 aa10.47□□□□□ -0.73
ATG4B-201ENST00000344376 DGAT2L7PQ6IED9 249 aa10.47□□□□□ -0.73
ATG4B-201ENST00000344376 TMEM101Q96IK0 257 aa10.47□□□□□ -0.73
ATG4B-201ENST00000344376 IGKV3OR2-268A0A0C4DH90 116 aa10.46□□□□□ -0.74
ATG4B-201ENST00000344376 INAFM2P0DMQ5 153 aa10.46□□□□□ -0.74
ATG4B-201ENST00000344376 ESDP10768 282 aa10.46□□□□□ -0.74
ATG4B-201ENST00000344376 MRPL54Q6P161 138 aaKnown RBP10.46□□□□□ -0.74
ATG4B-201ENST00000344376 TRBV27A0A0K0K1C4 114 aa10.45□□□□□ -0.74
ATG4B-201ENST00000344376 TSHBP01222 138 aa10.45□□□□□ -0.74
ATG4B-201ENST00000344376 CAMPP49913 170 aa10.45□□□□□ -0.74
ATG4B-201ENST00000344376 HBBP68871 147 aa10.45□□□□□ -0.74
ATG4B-201ENST00000344376 LBHQ53QV2 105 aaPredicted RBP10.45□□□□□ -0.74
ATG4B-201ENST00000344376 TMEM18Q96B42 140 aa10.45□□□□□ -0.74
ATG4B-201ENST00000344376 DNAH8Q96JB1 4490 aa10.45□□□□□ -0.74
ATG4B-201ENST00000344376 hDV102S1A0JD36 115 aa10.44□□□□□ -0.74
ATG4B-201ENST00000344376 SMKR1H3BMG3 65 aa10.44□□□□□ -0.74
ATG4B-201ENST00000344376 VCYO14598 125 aa10.44□□□□□ -0.74
ATG4B-201ENST00000344376 POLR2KP53803 58 aaKnown RBP10.44□□□□□ -0.74
ATG4B-201ENST00000344376 FAM104BQ5XKR9 115 aa10.44□□□□□ -0.74
ATG4B-201ENST00000344376 AP5S1Q9NUS5 200 aa10.44□□□□□ -0.74
ATG4B-201ENST00000344376 FCER1GP30273 86 aa10.43□□□□□ -0.74
ATG4B-201ENST00000344376 SCXQ7RTU7 201 aa10.43□□□□□ -0.74
ATG4B-201ENST00000344376 OR5A1Q8NGJ0 315 aa10.43□□□□□ -0.74
ATG4B-201ENST00000344376 CHAC1Q9BUX1 264 aa10.43□□□□□ -0.74
ATG4B-201ENST00000344376 GAGE12HA6NDE8 117 aa10.43□□□□□ -0.74
ATG4B-201ENST00000344376 SUMO2P61956 95 aaKnown RBP10.43□□□□□ -0.74
ATG4B-201ENST00000344376 CFAP161Q6P656 301 aa10.43□□□□□ -0.74
ATG4B-201ENST00000344376 KIR2DL4Q99706 377 aa10.43□□□□□ -0.74
ATG4B-201ENST00000344376 VPS13BQ7Z7G8 4022 aa10.42□□□□□ -0.74
ATG4B-201ENST00000344376 PLA2G1BP04054 148 aaKnown RBP10.42□□□□□ -0.74
ATG4B-201ENST00000344376 SMAGPQ0VAQ4 97 aa10.42□□□□□ -0.74
ATG4B-201ENST00000344376 MRPL51Q4U2R6 128 aaKnown RBP10.42□□□□□ -0.74
ATG4B-201ENST00000344376 LINC00528Q8N1L1 170 aa10.42□□□□□ -0.74
ATG4B-201ENST00000344376 NRACQ8N912 160 aa10.42□□□□□ -0.74
ATG4B-201ENST00000344376 C9orf163Q8N9P6 203 aa10.42□□□□□ -0.74
ATG4B-201ENST00000344376 CHCHD10Q8WYQ3 142 aaPredicted RBP10.42□□□□□ -0.74
ATG4B-201ENST00000344376 FAT1Q14517 4588 aa10.42□□□□□ -0.74
ATG4B-201ENST00000344376 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.41□□□□□ -0.74
ATG4B-201ENST00000344376 C2orf88Q9BSF0 95 aa10.41□□□□□ -0.74
ATG4B-201ENST00000344376 CKS2P33552 79 aa10.4□□□□□ -0.74
ATG4B-201ENST00000344376 CNBPP62633 177 aaKnown RBP10.4□□□□□ -0.74
ATG4B-201ENST00000344376 MRPL52Q86TS9 123 aaKnown RBP10.4□□□□□ -0.74
ATG4B-201ENST00000344376 ZNF664Q8N3J9 261 aa10.4□□□□□ -0.74
ATG4B-201ENST00000344376 PRO1933Q9H354 126 aa10.4□□□□□ -0.74
ATG4B-201ENST00000344376 C20orf78Q9BR46 151 aa10.39□□□□□ -0.75
ATG4B-201ENST00000344376 BAGE3Q86Y29 109 aa10.39□□□□□ -0.75
ATG4B-201ENST00000344376 CIRBP-AS1Q8TBR5 109 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms