RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 C9orf129Q5T035 196 aaKnown RBP10.77□□□□□ -0.68
CLCN1-201ENST00000343257 NDUFA1O15239 70 aa10.77□□□□□ -0.69
CLCN1-201ENST00000343257 KIR2DL5BQ8NHK3 375 aa10.77□□□□□ -0.69
CLCN1-201ENST00000343257 IMUPQ9GZP8 106 aa10.77□□□□□ -0.69
CLCN1-201ENST00000343257 HIVEP3Q5T1R4 2406 aa10.77□□□□□ -0.69
CLCN1-201ENST00000343257 C14orf132Q9NPU4 83 aa10.76□□□□□ -0.69
CLCN1-201ENST00000343257 C22orf24Q9Y442 160 aa10.76□□□□□ -0.69
CLCN1-201ENST00000343257 COX7CP15954 63 aa10.76□□□□□ -0.69
CLCN1-201ENST00000343257 CFHR3Q02985 330 aa10.75□□□□□ -0.69
CLCN1-201ENST00000343257 IGKV3OR2-268A0A0C4DH90 116 aa10.75□□□□□ -0.69
CLCN1-201ENST00000343257 ATP5G1P05496 136 aa10.75□□□□□ -0.69
CLCN1-201ENST00000343257 IGHV3OR16-12A0A075B7B8 117 aa10.74□□□□□ -0.69
CLCN1-201ENST00000343257 HIST2H2BDQ6DRA6 164 aa10.74□□□□□ -0.69
CLCN1-201ENST00000343257 A0A1B0GX51 115 aa10.74□□□□□ -0.69
CLCN1-201ENST00000343257 J3KT08 172 aa10.74□□□□□ -0.69
CLCN1-201ENST00000343257 K7EQG2 157 aa10.74□□□□□ -0.69
CLCN1-201ENST00000343257 FBXL19-AS1Q494R0 122 aa10.74□□□□□ -0.69
CLCN1-201ENST00000343257 SMIM9A6NGZ8 99 aa10.73□□□□□ -0.69
CLCN1-201ENST00000343257 DEFB131AP59861 70 aa10.73□□□□□ -0.69
CLCN1-201ENST00000343257 PIMREGQ9BSJ6 248 aa10.73□□□□□ -0.69
CLCN1-201ENST00000343257 TIMM17BO60830 172 aa10.73□□□□□ -0.69
CLCN1-201ENST00000343257 IGHV3-53P01767 116 aa10.73□□□□□ -0.69
CLCN1-201ENST00000343257 LINC00242Q5T6M2 205 aa10.73□□□□□ -0.69
CLCN1-201ENST00000343257 TOMM7Q9P0U1 55 aa10.73□□□□□ -0.69
CLCN1-201ENST00000343257 PEMTQ9UBM1 199 aa10.73□□□□□ -0.69
CLCN1-201ENST00000343257 BEAN1Q3B7T3 259 aa10.72□□□□□ -0.69
CLCN1-201ENST00000343257 C2orf48Q96LS8 159 aa10.72□□□□□ -0.69
CLCN1-201ENST00000343257 DNAL4O96015 105 aa10.72□□□□□ -0.69
CLCN1-201ENST00000343257 MALP21145 153 aa10.72□□□□□ -0.69
CLCN1-201ENST00000343257 DSCR8Q96T75 97 aa10.72□□□□□ -0.69
CLCN1-201ENST00000343257 CELSR2Q9HCU4 2923 aa10.72□□□□□ -0.69
CLCN1-201ENST00000343257 SLPIP03973 132 aa10.71□□□□□ -0.69
CLCN1-201ENST00000343257 C5orf38Q86SI9 138 aa10.71□□□□□ -0.69
CLCN1-201ENST00000343257 IGHV4-61A0A0C4DH41 118 aa10.71□□□□□ -0.69
CLCN1-201ENST00000343257 A0A087WYN8 130 aa10.71□□□□□ -0.7
CLCN1-201ENST00000343257 IGLV1-40P01703 118 aa10.71□□□□□ -0.7
CLCN1-201ENST00000343257 K7EMT4 169 aa10.7□□□□□ -0.7
CLCN1-201ENST00000343257 TRACP01848 142 aa10.7□□□□□ -0.7
CLCN1-201ENST00000343257 A6NDX4 124 aa10.69□□□□□ -0.7
CLCN1-201ENST00000343257 SMIM1B2RUZ4 78 aa10.69□□□□□ -0.7
CLCN1-201ENST00000343257 C5orf47Q569G3 176 aa10.69□□□□□ -0.7
CLCN1-201ENST00000343257 MUC6Q6W4X9 2439 aa10.69□□□□□ -0.7
CLCN1-201ENST00000343257 DEFB136Q30KP8 78 aa10.69□□□□□ -0.7
CLCN1-201ENST00000343257 NCR3O14931 201 aa10.68□□□□□ -0.7
CLCN1-201ENST00000343257 INAFM2P0DMQ5 153 aa10.68□□□□□ -0.7
CLCN1-201ENST00000343257 RBMY1BA6NDE4 496 aaKnown RBP10.68□□□□□ -0.7
CLCN1-201ENST00000343257 RBMY1EA6NEQ0 496 aaKnown RBP10.68□□□□□ -0.7
CLCN1-201ENST00000343257 RBMY1DP0C7P1 496 aaKnown RBP10.68□□□□□ -0.7
CLCN1-201ENST00000343257 HIST1H4AP62805 103 aaKnown RBP10.68□□□□□ -0.7
CLCN1-201ENST00000343257 LINC00846Q9NV44 126 aa10.68□□□□□ -0.7
CLCN1-201ENST00000343257 H3BUA1 57 aa10.67□□□□□ -0.7
CLCN1-201ENST00000343257 RNF152Q8N8N0 203 aa10.67□□□□□ -0.7
CLCN1-201ENST00000343257 WFDC9Q8NEX5 89 aa10.67□□□□□ -0.7
CLCN1-201ENST00000343257 ATOX1O00244 68 aa10.67□□□□□ -0.7
CLCN1-201ENST00000343257 CRPP02741 224 aa10.67□□□□□ -0.7
CLCN1-201ENST00000343257 LY6DQ14210 128 aa10.67□□□□□ -0.7
CLCN1-201ENST00000343257 LINC00337Q8N6G1 96 aa10.67□□□□□ -0.7
CLCN1-201ENST00000343257 WNK1Q9H4A3 2382 aa10.67□□□□□ -0.7
CLCN1-201ENST00000343257 LRRC75A-AS1Q8N1F1 130 aa10.67□□□□□ -0.7
CLCN1-201ENST00000343257 MIR7-3HGQ8N6C7 128 aa10.67□□□□□ -0.7
CLCN1-201ENST00000343257 K7ENP7 123 aa10.66□□□□□ -0.7
CLCN1-201ENST00000343257 HIST2H2BCQ6DN03 193 aa10.66□□□□□ -0.7
CLCN1-201ENST00000343257 OR13C6PQ8NH95 151 aa10.66□□□□□ -0.7
CLCN1-201ENST00000343257 CXCL5P42830 114 aa10.65□□□□□ -0.7
CLCN1-201ENST00000343257 IGLV5-39A0A0G2JS06 123 aa10.65□□□□□ -0.7
CLCN1-201ENST00000343257 IGHV4-59P01825 116 aa10.65□□□□□ -0.7
CLCN1-201ENST00000343257 CRYGAP11844 174 aa10.65□□□□□ -0.7
CLCN1-201ENST00000343257 LINC00158P58513 81 aa10.65□□□□□ -0.7
CLCN1-201ENST00000343257 ZNF415Q09FC8 603 aa10.65□□□□□ -0.7
CLCN1-201ENST00000343257 Q96MF0 132 aa10.65□□□□□ -0.7
CLCN1-201ENST00000343257 C11orf68Q9H3H3 251 aaKnown RBP10.65□□□□□ -0.7
CLCN1-201ENST00000343257 USP9YO00507 2555 aaPredicted RBP10.65□□□□□ -0.7
CLCN1-201ENST00000343257 LECT2O14960 151 aa10.65□□□□□ -0.71
CLCN1-201ENST00000343257 AVPP01185 164 aa10.65□□□□□ -0.71
CLCN1-201ENST00000343257 RPL18AQ02543 176 aaKnown RBP10.65□□□□□ -0.71
CLCN1-201ENST00000343257 UBE2E2Q96LR5 201 aa10.65□□□□□ -0.71
CLCN1-201ENST00000343257 NCOR2Q9Y618 2525 aa10.65□□□□□ -0.71
CLCN1-201ENST00000343257 PFN2P35080 140 aa10.64□□□□□ -0.71
CLCN1-201ENST00000343257 HILS1P60008 231 aa10.64□□□□□ -0.71
CLCN1-201ENST00000343257 C4orf26Q17RF5 130 aa10.64□□□□□ -0.71
CLCN1-201ENST00000343257 C18orf65Q6ZTR6 163 aa10.64□□□□□ -0.71
CLCN1-201ENST00000343257 SMIM11BQ8TCY0 68 aa10.64□□□□□ -0.71
CLCN1-201ENST00000343257 SND1-IT1Q9HBX3 110 aa10.64□□□□□ -0.71
CLCN1-201ENST00000343257 IGLV5-45A0A087WSX0 123 aa10.63□□□□□ -0.71
CLCN1-201ENST00000343257 PSMB8P28062 276 aa10.63□□□□□ -0.71
CLCN1-201ENST00000343257 XCL2Q9UBD3 114 aa10.63□□□□□ -0.71
CLCN1-201ENST00000343257 TRGV1A0A0A0MS02 117 aa10.63□□□□□ -0.71
CLCN1-201ENST00000343257 OXTP01178 125 aa10.63□□□□□ -0.71
CLCN1-201ENST00000343257 SLURP1P55000 103 aa10.63□□□□□ -0.71
CLCN1-201ENST00000343257 KHDC1LQ5JSQ8 128 aa10.63□□□□□ -0.71
CLCN1-201ENST00000343257 C19orf84I3L1E1 186 aa10.62□□□□□ -0.71
CLCN1-201ENST00000343257 ZANQ9Y493 2812 aa10.62□□□□□ -0.71
CLCN1-201ENST00000343257 DPH3Q96FX2 82 aa10.62□□□□□ -0.71
CLCN1-201ENST00000343257 IGKV2-28A0A075B6P5 120 aa10.61□□□□□ -0.71
CLCN1-201ENST00000343257 IGKV2D-28P01615 120 aa10.61□□□□□ -0.71
CLCN1-201ENST00000343257 RNASE1P07998 156 aaKnown RBP10.61□□□□□ -0.71
CLCN1-201ENST00000343257 HRCT1Q6UXD1 115 aa10.61□□□□□ -0.71
CLCN1-201ENST00000343257 MYO9AB2RTY4 2548 aa10.61□□□□□ -0.71
CLCN1-201ENST00000343257 USP17L23D6RBM5 183 aa10.61□□□□□ -0.71
CLCN1-201ENST00000343257 LINC01561Q8N1V8 128 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms