RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 C9orf85Q96MD7 179 aa11.12□□□□□ -0.63
UBE3B-202ENST00000342494 Q8N6K4 173 aa11.11□□□□□ -0.63
UBE3B-202ENST00000342494 UPK3BQ9BT76 320 aa11.11□□□□□ -0.63
UBE3B-202ENST00000342494 ZNF22P17026 224 aaPredicted RBP11.1□□□□□ -0.63
UBE3B-202ENST00000342494 Q6ZS46 218 aa11.1□□□□□ -0.63
UBE3B-202ENST00000342494 LELP1Q5T871 98 aa11.1□□□□□ -0.63
UBE3B-202ENST00000342494 CDSNQ15517 529 aa11.1□□□□□ -0.63
UBE3B-202ENST00000342494 SPANXB1Q9NS25 103 aaPredicted RBP11.1□□□□□ -0.63
UBE3B-202ENST00000342494 B5MCH6 92 aa11.09□□□□□ -0.63
UBE3B-202ENST00000342494 CLUHP3Q96NS8 147 aa11.09□□□□□ -0.63
UBE3B-202ENST00000342494 PRRC2AP48634 2157 aaKnown RBP11.09□□□□□ -0.63
UBE3B-202ENST00000342494 A0A0J9YWU9 116 aa11.09□□□□□ -0.63
UBE3B-202ENST00000342494 NANOS2P60321 138 aaKnown RBP11.09□□□□□ -0.63
UBE3B-202ENST00000342494 MED12LQ86YW9 2145 aa11.09□□□□□ -0.63
UBE3B-202ENST00000342494 CRIP3Q6Q6R5 217 aa11.09□□□□□ -0.63
UBE3B-202ENST00000342494 IGLV1-40P01703 118 aa11.08□□□□□ -0.64
UBE3B-202ENST00000342494 IGHV4-30-4P0DP06 118 aa11.08□□□□□ -0.64
UBE3B-202ENST00000342494 FOXI1Q12951 378 aa11.08□□□□□ -0.64
UBE3B-202ENST00000342494 SPATA12Q7Z6I5 190 aa11.08□□□□□ -0.64
UBE3B-202ENST00000342494 TMEM223A0PJW6 202 aa11.08□□□□□ -0.64
UBE3B-202ENST00000342494 IGKV2-28A0A075B6P5 120 aa11.08□□□□□ -0.64
UBE3B-202ENST00000342494 IGKV2D-28P01615 120 aa11.08□□□□□ -0.64
UBE3B-202ENST00000342494 PIK3CD-AS1Q5SR53 167 aa11.08□□□□□ -0.64
UBE3B-202ENST00000342494 CD164L2Q6UWJ8 174 aa11.08□□□□□ -0.64
UBE3B-202ENST00000342494 KRTAP10-9P60411 292 aa11.08□□□□□ -0.64
UBE3B-202ENST00000342494 NDUFA7O95182 113 aa11.07□□□□□ -0.64
UBE3B-202ENST00000342494 UBE2D4Q9Y2X8 147 aa11.07□□□□□ -0.64
UBE3B-202ENST00000342494 OBSL1O75147 1896 aa11.07□□□□□ -0.64
UBE3B-202ENST00000342494 DCANP1Q8TF63 244 aa11.07□□□□□ -0.64
UBE3B-202ENST00000342494 ZNF706Q9Y5V0 76 aaPredicted RBP11.07□□□□□ -0.64
UBE3B-202ENST00000342494 ZNF295-AS1Q8N0V1 137 aa11.07□□□□□ -0.64
UBE3B-202ENST00000342494 PPDPFQ9H3Y8 114 aa11.07□□□□□ -0.64
UBE3B-202ENST00000342494 LINC00526Q96FQ7 95 aa11.06□□□□□ -0.64
UBE3B-202ENST00000342494 PCDH15Q96QU1 1955 aa11.06□□□□□ -0.64
UBE3B-202ENST00000342494 LOC100131303A0A0U1RQF7 123 aa11.06□□□□□ -0.64
UBE3B-202ENST00000342494 TAX1BP3O14907 124 aa11.06□□□□□ -0.64
UBE3B-202ENST00000342494 LINC00308Q8TCZ7 52 aa11.06□□□□□ -0.64
UBE3B-202ENST00000342494 IGLV4-69A0A075B6H9 119 aa11.06□□□□□ -0.64
UBE3B-202ENST00000342494 CRIP1P50238 77 aa11.06□□□□□ -0.64
UBE3B-202ENST00000342494 AVPP01185 164 aa11.06□□□□□ -0.64
UBE3B-202ENST00000342494 COL4A4P53420 1690 aaPredicted RBP11.05□□□□□ -0.64
UBE3B-202ENST00000342494 USP17L23D6RBM5 183 aa11.05□□□□□ -0.64
UBE3B-202ENST00000342494 TCL1BO95988 128 aa11.05□□□□□ -0.64
UBE3B-202ENST00000342494 PTH2Q96A98 100 aa11.05□□□□□ -0.64
UBE3B-202ENST00000342494 SLPIP03973 132 aa11.05□□□□□ -0.64
UBE3B-202ENST00000342494 C6orf99Q4VX62 202 aa11.05□□□□□ -0.64
UBE3B-202ENST00000342494 SPINK6Q6UWN8 80 aa11.05□□□□□ -0.64
UBE3B-202ENST00000342494 ZNF106Q9H2Y7 1883 aaKnown RBP11.04□□□□□ -0.64
UBE3B-202ENST00000342494 TRAV23DV6A0A075B6W5 121 aa11.04□□□□□ -0.64
UBE3B-202ENST00000342494 LOC107984640A0A0U1RRK4 108 aa11.04□□□□□ -0.64
UBE3B-202ENST00000342494 MBD6Q96DN6 1003 aa11.04□□□□□ -0.64
UBE3B-202ENST00000342494 ALPK3Q96L96 1907 aa11.04□□□□□ -0.64
UBE3B-202ENST00000342494 PIEZO2Q9H5I5 2752 aa11.03□□□□□ -0.64
UBE3B-202ENST00000342494 TRBV27A0A0K0K1C4 114 aa11.03□□□□□ -0.64
UBE3B-202ENST00000342494 ARHGAP21Q5T5U3 1957 aa11.03□□□□□ -0.64
UBE3B-202ENST00000342494 MRGPRG-AS1Q2M3A8 158 aa11.03□□□□□ -0.64
UBE3B-202ENST00000342494 C1orf158Q8N1D5 194 aa11.03□□□□□ -0.64
UBE3B-202ENST00000342494 NUPR2A6NF83 97 aa11.02□□□□□ -0.64
UBE3B-202ENST00000342494 PYGO1Q9Y3Y4 419 aa11.02□□□□□ -0.65
UBE3B-202ENST00000342494 C2CD3Q4AC94 2353 aa11.02□□□□□ -0.65
UBE3B-202ENST00000342494 TRBV6-5A0A0K0K1A5 114 aa11.02□□□□□ -0.65
UBE3B-202ENST00000342494 PRM2P04554 102 aa11.02□□□□□ -0.65
UBE3B-202ENST00000342494 RNASE3P12724 160 aaKnown RBP11.02□□□□□ -0.65
UBE3B-202ENST00000342494 UBE2D3P61077 147 aa11.02□□□□□ -0.65
UBE3B-202ENST00000342494 LINC00959A0A1B0GUT2 108 aa11.02□□□□□ -0.65
UBE3B-202ENST00000342494 KLLNB2CW77 178 aa11.02□□□□□ -0.65
UBE3B-202ENST00000342494 LINC00643Q86TS7 51 aa11.02□□□□□ -0.65
UBE3B-202ENST00000342494 M0R378 163 aa11.01□□□□□ -0.65
UBE3B-202ENST00000342494 SCXQ7RTU7 201 aa11.01□□□□□ -0.65
UBE3B-202ENST00000342494 RNF185Q96GF1 192 aa11.01□□□□□ -0.65
UBE3B-202ENST00000342494 LINC00474Q9P2X8 69 aa11.01□□□□□ -0.65
UBE3B-202ENST00000342494 SS18L2Q9UHA2 77 aa11□□□□□ -0.65
UBE3B-202ENST00000342494 CCKP06307 115 aa11□□□□□ -0.65
UBE3B-202ENST00000342494 PRR9Q5T870 116 aa11□□□□□ -0.65
UBE3B-202ENST00000342494 TSHBP01222 138 aa11□□□□□ -0.65
UBE3B-202ENST00000342494 WFDC10BQ8IUB3 73 aa11□□□□□ -0.65
UBE3B-202ENST00000342494 HRCT1Q6UXD1 115 aa11□□□□□ -0.65
UBE3B-202ENST00000342494 DHRS4-AS1Q9P1J3 65 aa11□□□□□ -0.65
UBE3B-202ENST00000342494 MYO9AB2RTY4 2548 aa10.99□□□□□ -0.65
UBE3B-202ENST00000342494 RPL37AP8A6NKH3 93 aa10.98□□□□□ -0.65
UBE3B-202ENST00000342494 RETNQ9HD89 108 aa10.98□□□□□ -0.65
UBE3B-202ENST00000342494 PLAC8L1A1L4L8 177 aa10.98□□□□□ -0.65
UBE3B-202ENST00000342494 A8MZ25 164 aa10.98□□□□□ -0.65
UBE3B-202ENST00000342494 IGLV2-11P01706 119 aa10.98□□□□□ -0.65
UBE3B-202ENST00000342494 JMJD1CQ15652 2540 aa10.97□□□□□ -0.65
UBE3B-202ENST00000342494 C3orf84H3BNL1 204 aa10.96□□□□□ -0.65
UBE3B-202ENST00000342494 IGLV9-49A0A0B4J1Y8 123 aa10.96□□□□□ -0.66
UBE3B-202ENST00000342494 ODF3L2Q3SX64 289 aa10.96□□□□□ -0.66
UBE3B-202ENST00000342494 U3KQK5 164 aa10.96□□□□□ -0.66
UBE3B-202ENST00000342494 C11orf21Q9P2W6 132 aa10.96□□□□□ -0.66
UBE3B-202ENST00000342494 Q6ZQY7 126 aa10.95□□□□□ -0.66
UBE3B-202ENST00000342494 TEX49A0A1B0GTD5 131 aa10.94□□□□□ -0.66
UBE3B-202ENST00000342494 UBE2D2P62837 147 aa10.94□□□□□ -0.66
UBE3B-202ENST00000342494 PLXNB1O43157 2135 aa10.94□□□□□ -0.66
UBE3B-202ENST00000342494 TRIAP1O43715 76 aa10.94□□□□□ -0.66
UBE3B-202ENST00000342494 BRI3O95415 125 aa10.94□□□□□ -0.66
UBE3B-202ENST00000342494 SDIM1Q6ZPB5 146 aa10.94□□□□□ -0.66
UBE3B-202ENST00000342494 KIAA1549LQ6ZVL6 1849 aa10.94□□□□□ -0.66
UBE3B-202ENST00000342494 IGLV1-51P01701 117 aa10.93□□□□□ -0.66
UBE3B-202ENST00000342494 MRPS36P82909 103 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms