RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 GVINP1Q7Z2Y8 2422 aa13.39□□□□□ -0.27
SMPD1-201ENST00000342245 CCKP06307 115 aa13.38□□□□□ -0.27
SMPD1-201ENST00000342245 PIK3CD-AS1Q5SR53 167 aa13.38□□□□□ -0.27
SMPD1-201ENST00000342245 DMXL2Q8TDJ6 3036 aa13.38□□□□□ -0.27
SMPD1-201ENST00000342245 CUL9Q8IWT3 2517 aa13.38□□□□□ -0.27
SMPD1-201ENST00000342245 XCL1P47992 114 aa13.37□□□□□ -0.27
SMPD1-201ENST00000342245 DGAT2L7PQ6IED9 249 aa13.37□□□□□ -0.27
SMPD1-201ENST00000342245 TMEM86BQ8N661 226 aa13.37□□□□□ -0.27
SMPD1-201ENST00000342245 XCL2Q9UBD3 114 aa13.37□□□□□ -0.27
SMPD1-201ENST00000342245 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.37□□□□□ -0.27
SMPD1-201ENST00000342245 SMIM26A0A096LP01 95 aa13.37□□□□□ -0.27
SMPD1-201ENST00000342245 A0A0U1RRA0 63 aa13.37□□□□□ -0.27
SMPD1-201ENST00000342245 IGKV2-29A2NJV5 120 aaPredicted RBP13.37□□□□□ -0.27
SMPD1-201ENST00000342245 K7EMT4 169 aa13.37□□□□□ -0.27
SMPD1-201ENST00000342245 LINC00467Q9BRT7 94 aa13.37□□□□□ -0.27
SMPD1-201ENST00000342245 HOXD3P31249 432 aaPredicted RBP13.36□□□□□ -0.27
SMPD1-201ENST00000342245 ABCA4P78363 2273 aa13.36□□□□□ -0.27
SMPD1-201ENST00000342245 PIEZO2Q9H5I5 2752 aa13.36□□□□□ -0.27
SMPD1-201ENST00000342245 ACACAQ13085 2346 aa13.36□□□□□ -0.27
SMPD1-201ENST00000342245 SMIM1B2RUZ4 78 aa13.36□□□□□ -0.27
SMPD1-201ENST00000342245 MOB4Q9Y3A3 225 aa13.36□□□□□ -0.27
SMPD1-201ENST00000342245 RPL35AP18077 110 aaKnown RBP13.35□□□□□ -0.27
SMPD1-201ENST00000342245 LYPD5Q6UWN5 251 aa13.35□□□□□ -0.27
SMPD1-201ENST00000342245 SPTBN2O15020 2390 aa13.34□□□□□ -0.27
SMPD1-201ENST00000342245 A0A087WYN8 130 aa13.34□□□□□ -0.27
SMPD1-201ENST00000342245 KNCNA6PVL3 124 aa13.34□□□□□ -0.27
SMPD1-201ENST00000342245 C20orf197Q8N268 126 aa13.34□□□□□ -0.27
SMPD1-201ENST00000342245 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.34□□□□□ -0.27
SMPD1-201ENST00000342245 COX6A2Q02221 97 aa13.34□□□□□ -0.27
SMPD1-201ENST00000342245 C9orf129Q5T035 196 aaKnown RBP13.34□□□□□ -0.27
SMPD1-201ENST00000342245 LINC00242Q5T6M2 205 aa13.34□□□□□ -0.27
SMPD1-201ENST00000342245 SNRPD3P62318 126 aaKnown RBP13.33□□□□□ -0.28
SMPD1-201ENST00000342245 JMJD7-PLA2G4BH0Y9G9 81 aa13.33□□□□□ -0.28
SMPD1-201ENST00000342245 SAA4P35542 130 aa13.33□□□□□ -0.28
SMPD1-201ENST00000342245 C16orf95Q9H693 158 aa13.33□□□□□ -0.28
SMPD1-201ENST00000342245 H7BZZ5 65 aa13.32□□□□□ -0.28
SMPD1-201ENST00000342245 SMIM11BQ8TCY0 68 aa13.32□□□□□ -0.28
SMPD1-201ENST00000342245 APC2O95996 2303 aa13.31□□□□□ -0.28
SMPD1-201ENST00000342245 POLEQ07864 2286 aa13.31□□□□□ -0.28
SMPD1-201ENST00000342245 TRAV7A0A075B6U4 112 aa13.31□□□□□ -0.28
SMPD1-201ENST00000342245 ORMDL1Q9P0S3 153 aa13.31□□□□□ -0.28
SMPD1-201ENST00000342245 IGHV3OR16-12A0A075B7B8 117 aa13.31□□□□□ -0.28
SMPD1-201ENST00000342245 TRAV23DV6A0A075B6W5 121 aa13.3□□□□□ -0.28
SMPD1-201ENST00000342245 LINC00337Q8N6G1 96 aa13.3□□□□□ -0.28
SMPD1-201ENST00000342245 SND1-IT1Q9HBX3 110 aa13.3□□□□□ -0.28
SMPD1-201ENST00000342245 NCR3O14931 201 aa13.3□□□□□ -0.28
SMPD1-201ENST00000342245 LINC01560Q8TB33 94 aa13.3□□□□□ -0.28
SMPD1-201ENST00000342245 IGHV3-73A0A0B4J1V6 119 aa13.29□□□□□ -0.28
SMPD1-201ENST00000342245 HILS1P60008 231 aa13.29□□□□□ -0.28
SMPD1-201ENST00000342245 PKIGQ9Y2B9 76 aa13.29□□□□□ -0.28
SMPD1-201ENST00000342245 KLKP1Q107X0 134 aa13.29□□□□□ -0.28
SMPD1-201ENST00000342245 SPINK13Q1W4C9 94 aa13.29□□□□□ -0.28
SMPD1-201ENST00000342245 LECT2O14960 151 aa13.28□□□□□ -0.28
SMPD1-201ENST00000342245 ZFP36P26651 326 aaKnown RBP13.28□□□□□ -0.28
SMPD1-201ENST00000342245 ATP5EP56381 51 aaPredicted RBP13.28□□□□□ -0.28
SMPD1-201ENST00000342245 PROK1P58294 105 aa13.28□□□□□ -0.28
SMPD1-201ENST00000342245 IGKV2-28A0A075B6P5 120 aa13.27□□□□□ -0.29
SMPD1-201ENST00000342245 LY6HO94772 140 aa13.27□□□□□ -0.29
SMPD1-201ENST00000342245 IGKV2D-28P01615 120 aa13.27□□□□□ -0.29
SMPD1-201ENST00000342245 V9GYY9 64 aa13.27□□□□□ -0.29
SMPD1-201ENST00000342245 GRNP28799 593 aaKnown RBP13.27□□□□□ -0.29
SMPD1-201ENST00000342245 SEC61GP60059 68 aa13.27□□□□□ -0.29
SMPD1-201ENST00000342245 UBL5Q9BZL1 73 aa13.27□□□□□ -0.29
SMPD1-201ENST00000342245 IGKV3-20P01619 116 aa13.26□□□□□ -0.29
SMPD1-201ENST00000342245 IGHV3-11P01762 117 aa13.25□□□□□ -0.29
SMPD1-201ENST00000342245 IGHV3-53P01767 116 aa13.25□□□□□ -0.29
SMPD1-201ENST00000342245 MIR7-3HGQ8N6C7 128 aa13.25□□□□□ -0.29
SMPD1-201ENST00000342245 NDUFC1O43677 76 aa13.25□□□□□ -0.29
SMPD1-201ENST00000342245 NBL1P41271 181 aa13.25□□□□□ -0.29
SMPD1-201ENST00000342245 FP248Q71RG6 208 aaPredicted RBP13.25□□□□□ -0.29
SMPD1-201ENST00000342245 ENHOQ6UWT2 76 aa13.24□□□□□ -0.29
SMPD1-201ENST00000342245 PTPRZ1P23471 2315 aaPredicted RBP13.23□□□□□ -0.29
SMPD1-201ENST00000342245 RPL36AP83881 106 aaKnown RBP13.23□□□□□ -0.29
SMPD1-201ENST00000342245 RPL36ALQ969Q0 106 aaKnown RBP13.23□□□□□ -0.29
SMPD1-201ENST00000342245 LINC00167Q96N53 147 aa13.23□□□□□ -0.29
SMPD1-201ENST00000342245 TPRP12270 2363 aaKnown RBP13.22□□□□□ -0.29
SMPD1-201ENST00000342245 K7EQG2 157 aa13.22□□□□□ -0.29
SMPD1-201ENST00000342245 C1orf195Q5TG92 126 aa13.22□□□□□ -0.29
SMPD1-201ENST00000342245 FAM19A1Q7Z5A9 133 aa13.22□□□□□ -0.29
SMPD1-201ENST00000342245 RELNP78509 3460 aa13.21□□□□□ -0.29
SMPD1-201ENST00000342245 MUC6Q6W4X9 2439 aa13.21□□□□□ -0.29
SMPD1-201ENST00000342245 Q6ZSN1 163 aa13.21□□□□□ -0.29
SMPD1-201ENST00000342245 IGHV3-38A0A0C4DH36 116 aa13.2□□□□□ -0.3
SMPD1-201ENST00000342245 TMEM256-PLSCR3K7ERE1 68 aa13.2□□□□□ -0.3
SMPD1-201ENST00000342245 SS18Q15532 418 aa13.2□□□□□ -0.3
SMPD1-201ENST00000342245 CDSNQ15517 529 aa13.19□□□□□ -0.3
SMPD1-201ENST00000342245 AVPP01185 164 aa13.18□□□□□ -0.3
SMPD1-201ENST00000342245 C11orf71Q6IPW1 123 aa13.18□□□□□ -0.3
SMPD1-201ENST00000342245 WFDC11Q8NEX6 87 aa13.18□□□□□ -0.3
SMPD1-201ENST00000342245 WFDC9Q8NEX5 89 aa13.18□□□□□ -0.3
SMPD1-201ENST00000342245 COX7B2Q8TF08 81 aa13.18□□□□□ -0.3
SMPD1-201ENST00000342245 Q9UF83 564 aa13.18□□□□□ -0.3
SMPD1-201ENST00000342245 TACC2O95359 2948 aa13.17□□□□□ -0.3
SMPD1-201ENST00000342245 BLCAPP62952 87 aa13.17□□□□□ -0.3
SMPD1-201ENST00000342245 LY6G6DO95868 133 aa13.17□□□□□ -0.3
SMPD1-201ENST00000342245 LRBAP50851 2863 aa13.17□□□□□ -0.3
SMPD1-201ENST00000342245 DCHS2Q6V1P9 2916 aa13.16□□□□□ -0.3
SMPD1-201ENST00000342245 IBA57-AS1B1ANH7 110 aa13.16□□□□□ -0.3
SMPD1-201ENST00000342245 IGLV1-40P01703 118 aa13.16□□□□□ -0.3
SMPD1-201ENST00000342245 TLN1Q9Y490 2541 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 151.1 ms