RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.03□□□□□ -0.8
UBE3B-201ENST00000340074 PRSS47A8MTI9 375 aa10.03□□□□□ -0.8
UBE3B-201ENST00000340074 SLC7A5P1Q8MH63 180 aa10.03□□□□□ -0.8
UBE3B-201ENST00000340074 GNB1LQ9BYB4 327 aa10.03□□□□□ -0.8
UBE3B-201ENST00000340074 MAP1LC3AQ9H492 121 aa10.03□□□□□ -0.8
UBE3B-201ENST00000340074 UBE2D4Q9Y2X8 147 aa10.03□□□□□ -0.8
UBE3B-201ENST00000340074 KIAA1109Q2LD37 5005 aa10.03□□□□□ -0.8
UBE3B-201ENST00000340074 KIAA1644Q3SXP7 199 aa10.02□□□□□ -0.81
UBE3B-201ENST00000340074 CDC42SE2Q9NRR3 84 aa10.02□□□□□ -0.81
UBE3B-201ENST00000340074 RPL39P62891 51 aaKnown RBP10.01□□□□□ -0.81
UBE3B-201ENST00000340074 DGAT2L7PQ6IED9 249 aa10.01□□□□□ -0.81
UBE3B-201ENST00000340074 ZNF664Q8N3J9 261 aa10.01□□□□□ -0.81
UBE3B-201ENST00000340074 TMEM18Q96B42 140 aa10.01□□□□□ -0.81
UBE3B-201ENST00000340074 CSDC2Q9Y534 153 aaKnown RBP10.01□□□□□ -0.81
UBE3B-201ENST00000340074 USP17L23D6RBM5 183 aa10□□□□□ -0.81
UBE3B-201ENST00000340074 RAB5AP20339 215 aa10□□□□□ -0.81
UBE3B-201ENST00000340074 GCSHP23434 173 aa10□□□□□ -0.81
UBE3B-201ENST00000340074 SMAGPQ0VAQ4 97 aa10□□□□□ -0.81
UBE3B-201ENST00000340074 TGIF2-C20orf24A0A0A6YYL0 155 aa9.99□□□□□ -0.81
UBE3B-201ENST00000340074 KRTAP10-1P60331 282 aa9.99□□□□□ -0.81
UBE3B-201ENST00000340074 COX19Q49B96 90 aa9.99□□□□□ -0.81
UBE3B-201ENST00000340074 Q8N8P6 123 aa9.99□□□□□ -0.81
UBE3B-201ENST00000340074 LINC00959A0A1B0GUT2 108 aa9.99□□□□□ -0.81
UBE3B-201ENST00000340074 GAGE12HA6NDE8 117 aa9.99□□□□□ -0.81
UBE3B-201ENST00000340074 C14orf177Q52M58 125 aa9.99□□□□□ -0.81
UBE3B-201ENST00000340074 RNASE13Q5GAN3 156 aaKnown RBP9.99□□□□□ -0.81
UBE3B-201ENST00000340074 CHCHD10Q8WYQ3 142 aaPredicted RBP9.99□□□□□ -0.81
UBE3B-201ENST00000340074 TIMM21Q9BVV7 248 aa9.99□□□□□ -0.81
UBE3B-201ENST00000340074 APOBP04114 4563 aaKnown RBP9.98□□□□□ -0.81
UBE3B-201ENST00000340074 CDK2AP2O75956 126 aa9.98□□□□□ -0.81
UBE3B-201ENST00000340074 MT-ND6P03923 174 aa9.98□□□□□ -0.81
UBE3B-201ENST00000340074 Q6ZUT4 128 aa9.98□□□□□ -0.81
UBE3B-201ENST00000340074 MRPL18Q9H0U6 180 aaKnown RBP9.98□□□□□ -0.81
UBE3B-201ENST00000340074 PRSS1P07477 247 aa9.97□□□□□ -0.81
UBE3B-201ENST00000340074 IFI27P40305 119 aaPredicted RBP9.97□□□□□ -0.81
UBE3B-201ENST00000340074 CCL25O15444 150 aa9.96□□□□□ -0.82
UBE3B-201ENST00000340074 XCL1P47992 114 aa9.96□□□□□ -0.82
UBE3B-201ENST00000340074 FABP9Q0Z7S8 132 aa9.96□□□□□ -0.82
UBE3B-201ENST00000340074 SS18Q15532 418 aa9.96□□□□□ -0.82
UBE3B-201ENST00000340074 FAM104AQ969W3 186 aa9.96□□□□□ -0.82
UBE3B-201ENST00000340074 ALKBH7Q9BT30 221 aaPredicted RBP9.96□□□□□ -0.82
UBE3B-201ENST00000340074 NXT2Q9NPJ8 142 aaKnown RBP9.96□□□□□ -0.82
UBE3B-201ENST00000340074 FOXI1Q12951 378 aa9.95□□□□□ -0.82
UBE3B-201ENST00000340074 LINC01620Q4KN68 170 aa9.95□□□□□ -0.82
UBE3B-201ENST00000340074 OPRPNQ99935 248 aaPredicted RBP9.95□□□□□ -0.82
UBE3B-201ENST00000340074 SPANXA1Q9NS26 97 aa9.95□□□□□ -0.82
UBE3B-201ENST00000340074 HSPG2P98160 4391 aa9.95□□□□□ -0.82
UBE3B-201ENST00000340074 K7EMI3 77 aa9.94□□□□□ -0.82
UBE3B-201ENST00000340074 TRAPPC1Q9Y5R8 145 aa9.94□□□□□ -0.82
UBE3B-201ENST00000340074 HERC2O95714 4834 aa9.93□□□□□ -0.82
UBE3B-201ENST00000340074 TRAV13-1A0A0B4J241 112 aa9.93□□□□□ -0.82
UBE3B-201ENST00000340074 hDV102S1A0JD36 115 aa9.93□□□□□ -0.82
UBE3B-201ENST00000340074 MRPS36P82909 103 aaKnown RBP9.93□□□□□ -0.82
UBE3B-201ENST00000340074 ORMDL2Q53FV1 153 aa9.93□□□□□ -0.82
UBE3B-201ENST00000340074 YPEL4Q96NS1 127 aa9.93□□□□□ -0.82
UBE3B-201ENST00000340074 RYR1P21817 5038 aa9.92□□□□□ -0.82
UBE3B-201ENST00000340074 C1orf196B1AJZ1 125 aa9.92□□□□□ -0.82
UBE3B-201ENST00000340074 C2orf66Q6UXQ4 117 aa9.92□□□□□ -0.82
UBE3B-201ENST00000340074 C15orf56Q8N910 161 aa9.92□□□□□ -0.82
UBE3B-201ENST00000340074 PRSS3P2Q8NHM4 247 aa9.92□□□□□ -0.82
UBE3B-201ENST00000340074 CYSLTR1Q9Y271 337 aa9.92□□□□□ -0.82
UBE3B-201ENST00000340074 PYGO1Q9Y3Y4 419 aa9.92□□□□□ -0.82
UBE3B-201ENST00000340074 XGP55808 180 aa9.91□□□□□ -0.82
UBE3B-201ENST00000340074 CFAP161Q6P656 301 aa9.91□□□□□ -0.82
UBE3B-201ENST00000340074 CD164L2Q6UWJ8 174 aa9.91□□□□□ -0.82
UBE3B-201ENST00000340074 CBLN2Q8IUK8 224 aa9.91□□□□□ -0.82
UBE3B-201ENST00000340074 IGLV4-3A0A075B6K6 122 aa9.9□□□□□ -0.82
UBE3B-201ENST00000340074 SMCO4Q9NRQ5 59 aa9.9□□□□□ -0.83
UBE3B-201ENST00000340074 FAM30AQ9NZY2 134 aa9.9□□□□□ -0.83
UBE3B-201ENST00000340074 SLPIP03973 132 aa9.89□□□□□ -0.83
UBE3B-201ENST00000340074 HIGD2BQ4VC39 106 aa9.89□□□□□ -0.83
UBE3B-201ENST00000340074 TMEM141Q96I45 108 aa9.89□□□□□ -0.83
UBE3B-201ENST00000340074 AP5S1Q9NUS5 200 aa9.89□□□□□ -0.83
UBE3B-201ENST00000340074 LINC01546A6NGU7 62 aa9.88□□□□□ -0.83
UBE3B-201ENST00000340074 IFITM10A6NMD0 228 aa9.88□□□□□ -0.83
UBE3B-201ENST00000340074 G0S2P27469 103 aa9.88□□□□□ -0.83
UBE3B-201ENST00000340074 CNBPP62633 177 aaKnown RBP9.88□□□□□ -0.83
UBE3B-201ENST00000340074 HAMPP81172 84 aa9.88□□□□□ -0.83
UBE3B-201ENST00000340074 KRTAP17-1Q9BYP8 105 aa9.88□□□□□ -0.83
UBE3B-201ENST00000340074 GVQW2A0A096LPI5 108 aaPredicted RBP9.87□□□□□ -0.83
UBE3B-201ENST00000340074 IGIPA6NJ69 53 aa9.87□□□□□ -0.83
UBE3B-201ENST00000340074 COX7A2LO14548 114 aa9.87□□□□□ -0.83
UBE3B-201ENST00000340074 C9orf163Q8N9P6 203 aa9.87□□□□□ -0.83
UBE3B-201ENST00000340074 C18orf32Q8TCD1 76 aa9.87□□□□□ -0.83
UBE3B-201ENST00000340074 TOMM6Q96B49 74 aa9.87□□□□□ -0.83
UBE3B-201ENST00000340074 DNAH8Q96JB1 4490 aa9.87□□□□□ -0.83
UBE3B-201ENST00000340074 IGHV1-58A0A0C4DH39 117 aa9.86□□□□□ -0.83
UBE3B-201ENST00000340074 ZC2HC1BQ5TFG8 222 aa9.86□□□□□ -0.83
UBE3B-201ENST00000340074 TEX43Q6ZNM6 134 aa9.86□□□□□ -0.83
UBE3B-201ENST00000340074 Q6ZSA8 131 aa9.86□□□□□ -0.83
UBE3B-201ENST00000340074 FA2HQ7L5A8 372 aa9.86□□□□□ -0.83
UBE3B-201ENST00000340074 MALP21145 153 aa9.85□□□□□ -0.83
UBE3B-201ENST00000340074 Q6ZN92 141 aa9.85□□□□□ -0.83
UBE3B-201ENST00000340074 LINC00173Q6ZV60 143 aa9.85□□□□□ -0.83
UBE3B-201ENST00000340074 C5orf38Q86SI9 138 aa9.85□□□□□ -0.83
UBE3B-201ENST00000340074 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.84□□□□□ -0.83
UBE3B-201ENST00000340074 NPSP0C0P6 89 aa9.84□□□□□ -0.83
UBE3B-201ENST00000340074 LINC00526Q96FQ7 95 aa9.84□□□□□ -0.83
UBE3B-201ENST00000340074 AMELXQ99217 191 aa9.84□□□□□ -0.83
UBE3B-201ENST00000340074 C2orf88Q9BSF0 95 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms