RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 GAGE5Q13069 117 aa7.95□□□□□ -1.14
LRP1-202ENST00000338962 GAGE6Q13070 117 aa7.95□□□□□ -1.14
LRP1-202ENST00000338962 DAZ2Q13117 558 aaKnown RBP7.95□□□□□ -1.14
LRP1-202ENST00000338962 PHLDA1Q8WV24 401 aaPredicted RBP7.95□□□□□ -1.14
LRP1-202ENST00000338962 NOP10Q9NPE3 64 aaKnown RBP7.95□□□□□ -1.14
LRP1-202ENST00000338962 SPANXA1Q9NS26 97 aa7.95□□□□□ -1.14
LRP1-202ENST00000338962 RRN3P1Q2M238 152 aa7.95□□□□□ -1.14
LRP1-202ENST00000338962 C12orf74Q32Q52 190 aa7.95□□□□□ -1.14
LRP1-202ENST00000338962 CSNK1G2-AS1Q8NCQ2 148 aa7.95□□□□□ -1.14
LRP1-202ENST00000338962 OPRPNQ99935 248 aaPredicted RBP7.95□□□□□ -1.14
LRP1-202ENST00000338962 HERVK_113P61574 105 aa7.94□□□□□ -1.14
LRP1-202ENST00000338962 TRAV4A0A0B4J268 109 aa7.94□□□□□ -1.14
LRP1-202ENST00000338962 K7ERJ3 54 aa7.94□□□□□ -1.14
LRP1-202ENST00000338962 KPRPQ5T749 579 aaPredicted RBP7.94□□□□□ -1.14
LRP1-202ENST00000338962 PRADC1Q9BSG0 188 aa7.94□□□□□ -1.14
LRP1-202ENST00000338962 VCX2Q9H322 139 aa7.94□□□□□ -1.14
LRP1-202ENST00000338962 PYGO1Q9Y3Y4 419 aa7.94□□□□□ -1.14
LRP1-202ENST00000338962 IGLV4-3A0A075B6K6 122 aa7.93□□□□□ -1.14
LRP1-202ENST00000338962 IGHV3-38A0A0C4DH36 116 aa7.93□□□□□ -1.14
LRP1-202ENST00000338962 TMEM170BQ5T4T1 132 aa7.93□□□□□ -1.14
LRP1-202ENST00000338962 MAPKAPK5-AS1Q8N8E1 139 aa7.93□□□□□ -1.14
LRP1-202ENST00000338962 PKD1L1Q8TDX9 2849 aa7.93□□□□□ -1.14
LRP1-202ENST00000338962 TRBV7-3A0A075B6L6 115 aa7.93□□□□□ -1.14
LRP1-202ENST00000338962 TRGV2A0A075B6R0 118 aa7.93□□□□□ -1.14
LRP1-202ENST00000338962 A0A1B0GWB2 263 aa7.93□□□□□ -1.14
LRP1-202ENST00000338962 PLAC8L1A1L4L8 177 aa7.93□□□□□ -1.14
LRP1-202ENST00000338962 LYRM7Q5U5X0 104 aa7.93□□□□□ -1.14
LRP1-202ENST00000338962 ATP6V0E2Q8NHE4 81 aa7.93□□□□□ -1.14
LRP1-202ENST00000338962 ZNRF2Q8NHG8 242 aa7.93□□□□□ -1.14
LRP1-202ENST00000338962 TRBV10-1A0A0K0K1A3 114 aa7.92□□□□□ -1.14
LRP1-202ENST00000338962 K7EQD1 137 aa7.92□□□□□ -1.14
LRP1-202ENST00000338962 GAGE7O76087 117 aa7.91□□□□□ -1.14
LRP1-202ENST00000338962 GAGE12FP0CL80 117 aa7.91□□□□□ -1.14
LRP1-202ENST00000338962 GAGE12GP0CL81 117 aa7.91□□□□□ -1.14
LRP1-202ENST00000338962 GAGE12IP0CL82 117 aa7.91□□□□□ -1.14
LRP1-202ENST00000338962 HERV-K104P63124 156 aa7.91□□□□□ -1.14
LRP1-202ENST00000338962 RPL36AP83881 106 aaKnown RBP7.91□□□□□ -1.14
LRP1-202ENST00000338962 GAGE13Q4V321 117 aa7.91□□□□□ -1.14
LRP1-202ENST00000338962 NFE4Q86UQ8 179 aa7.91□□□□□ -1.14
LRP1-202ENST00000338962 RPL36ALQ969Q0 106 aaKnown RBP7.91□□□□□ -1.14
LRP1-202ENST00000338962 CHCHD7Q9BUK0 85 aa7.91□□□□□ -1.14
LRP1-202ENST00000338962 MGAM2Q2M2H8 2515 aa7.91□□□□□ -1.14
LRP1-202ENST00000338962 KRTAP10-11P60412 298 aa7.91□□□□□ -1.14
LRP1-202ENST00000338962 SCGB1D4Q6XE38 83 aa7.91□□□□□ -1.14
LRP1-202ENST00000338962 SLC25A29Q8N8R3 303 aa7.91□□□□□ -1.14
LRP1-202ENST00000338962 SS18L2Q9UHA2 77 aa7.91□□□□□ -1.14
LRP1-202ENST00000338962 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.9□□□□□ -1.14
LRP1-202ENST00000338962 IGKV2-29A2NJV5 120 aaPredicted RBP7.9□□□□□ -1.14
LRP1-202ENST00000338962 ZNF815PA8K554 130 aa7.9□□□□□ -1.14
LRP1-202ENST00000338962 CEMP1Q6PRD7 247 aaPredicted RBP7.9□□□□□ -1.14
LRP1-202ENST00000338962 OVOL2Q9BRP0 275 aa7.9□□□□□ -1.14
LRP1-202ENST00000338962 UBE2D4Q9Y2X8 147 aa7.9□□□□□ -1.14
LRP1-202ENST00000338962 SPINK8P0C7L1 97 aa7.9□□□□□ -1.15
LRP1-202ENST00000338962 RNF183Q96D59 192 aa7.9□□□□□ -1.15
LRP1-202ENST00000338962 SRSF9Q13242 221 aaKnown RBP eCLIP7.89□□□□□ -1.15
LRP1-202ENST00000338962 DAZ4Q86SG3 579 aaKnown RBP7.89□□□□□ -1.15
LRP1-202ENST00000338962 AMELXQ99217 191 aa7.89□□□□□ -1.15
LRP1-202ENST00000338962 DAZ3Q9NR90 486 aaKnown RBP7.89□□□□□ -1.15
LRP1-202ENST00000338962 A0A0J9YXV3 536 aa7.88□□□□□ -1.15
LRP1-202ENST00000338962 H3BMG7 143 aa7.88□□□□□ -1.15
LRP1-202ENST00000338962 WFDC2Q14508 124 aa7.88□□□□□ -1.15
LRP1-202ENST00000338962 RNASE13Q5GAN3 156 aaKnown RBP7.88□□□□□ -1.15
LRP1-202ENST00000338962 TRGV4A0A0C4DH28 118 aa7.87□□□□□ -1.15
LRP1-202ENST00000338962 GAGE12JA6NER3 117 aa7.87□□□□□ -1.15
LRP1-202ENST00000338962 UBE2D3P61077 147 aa7.87□□□□□ -1.15
LRP1-202ENST00000338962 UBE2D2P62837 147 aa7.87□□□□□ -1.15
LRP1-202ENST00000338962 GAGE4Q13068 117 aa7.87□□□□□ -1.15
LRP1-202ENST00000338962 DGAT2L7PQ6IED9 249 aa7.87□□□□□ -1.15
LRP1-202ENST00000338962 FAM104AQ969W3 186 aa7.87□□□□□ -1.15
LRP1-202ENST00000338962 ANAPC13Q9BS18 74 aa7.87□□□□□ -1.15
LRP1-202ENST00000338962 CDIP1Q9H305 208 aa7.87□□□□□ -1.15
LRP1-202ENST00000338962 TRBV6-4A0A1B0GX49 114 aa7.87□□□□□ -1.15
LRP1-202ENST00000338962 TMEM223A0PJW6 202 aa7.87□□□□□ -1.15
LRP1-202ENST00000338962 ZNF22P17026 224 aaPredicted RBP7.87□□□□□ -1.15
LRP1-202ENST00000338962 MRPS36P82909 103 aaKnown RBP7.87□□□□□ -1.15
LRP1-202ENST00000338962 Q6ZUT4 128 aa7.87□□□□□ -1.15
LRP1-202ENST00000338962 DNAH3Q8TD57 4116 aa7.87□□□□□ -1.15
LRP1-202ENST00000338962 J3QQQ9 107 aa7.86□□□□□ -1.15
LRP1-202ENST00000338962 LGALS3P17931 250 aaKnown RBP7.86□□□□□ -1.15
LRP1-202ENST00000338962 ETDBQ3ZM63 59 aa7.86□□□□□ -1.15
LRP1-202ENST00000338962 PRO0461Q9UI25 63 aa7.86□□□□□ -1.15
LRP1-202ENST00000338962 NBEAL2Q6ZNJ1 2754 aa7.86□□□□□ -1.15
LRP1-202ENST00000338962 TSPEAR-AS2P59090 65 aa7.86□□□□□ -1.15
LRP1-202ENST00000338962 TIMM21Q9BVV7 248 aa7.86□□□□□ -1.15
LRP1-202ENST00000338962 DEFB130BP0DP73 79 aa7.85□□□□□ -1.15
LRP1-202ENST00000338962 DEFB130AP0DP74 79 aa7.85□□□□□ -1.15
LRP1-202ENST00000338962 FOXI1Q12951 378 aa7.85□□□□□ -1.15
LRP1-202ENST00000338962 PLEKHB2Q96CS7 222 aa7.85□□□□□ -1.15
LRP1-202ENST00000338962 IGHV3-64A0A075B6Q5 118 aa7.84□□□□□ -1.15
LRP1-202ENST00000338962 SMIM9A6NGZ8 99 aa7.84□□□□□ -1.15
LRP1-202ENST00000338962 LEPROTO15243 131 aa7.84□□□□□ -1.15
LRP1-202ENST00000338962 APOC4P55056 127 aa7.84□□□□□ -1.15
LRP1-202ENST00000338962 KIR2DL5BQ8NHK3 375 aa7.84□□□□□ -1.15
LRP1-202ENST00000338962 TRBV20-1A0A075B6N2 111 aa7.84□□□□□ -1.15
LRP1-202ENST00000338962 TINCRA0A1B0GVN0 87 aa7.84□□□□□ -1.15
LRP1-202ENST00000338962 APOMO95445 188 aa7.84□□□□□ -1.15
LRP1-202ENST00000338962 UBE2D1P51668 147 aa7.84□□□□□ -1.15
LRP1-202ENST00000338962 NTM-AS1Q6ZSK4 140 aa7.84□□□□□ -1.15
LRP1-202ENST00000338962 X6R8D5 127 aa7.84□□□□□ -1.15
LRP1-202ENST00000338962 A8MZ25 164 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms