RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 FXYD2P54710 66 aa9.06□□□□□ -0.96
LIMK1-201ENST00000336180 PRADC1Q9BSG0 188 aa9.06□□□□□ -0.96
LIMK1-201ENST00000336180 NDUFV3P56181 108 aaKnown RBP9.06□□□□□ -0.96
LIMK1-201ENST00000336180 GAGE13Q4V321 117 aa9.06□□□□□ -0.96
LIMK1-201ENST00000336180 C19orf73Q9NVV2 129 aa9.06□□□□□ -0.96
LIMK1-201ENST00000336180 A0A0J9YXV3 536 aa9.05□□□□□ -0.96
LIMK1-201ENST00000336180 I3L3M4 83 aa9.05□□□□□ -0.96
LIMK1-201ENST00000336180 DEFB130BP0DP73 79 aa9.05□□□□□ -0.96
LIMK1-201ENST00000336180 DEFB130AP0DP74 79 aa9.05□□□□□ -0.96
LIMK1-201ENST00000336180 PLEKHB2Q96CS7 222 aa9.05□□□□□ -0.96
LIMK1-201ENST00000336180 CHAC1Q9BUX1 264 aa9.05□□□□□ -0.96
LIMK1-201ENST00000336180 NDUFA7O95182 113 aa9.05□□□□□ -0.96
LIMK1-201ENST00000336180 PPP1R17O96001 155 aa9.05□□□□□ -0.96
LIMK1-201ENST00000336180 IGLV4-69A0A075B6H9 119 aa9.05□□□□□ -0.96
LIMK1-201ENST00000336180 TRGV2A0A075B6R0 118 aa9.05□□□□□ -0.96
LIMK1-201ENST00000336180 A8MTW9 85 aa9.05□□□□□ -0.96
LIMK1-201ENST00000336180 A8MZ25 164 aa9.05□□□□□ -0.96
LIMK1-201ENST00000336180 H3BMG7 143 aa9.05□□□□□ -0.96
LIMK1-201ENST00000336180 SFTA2Q6UW10 78 aa9.05□□□□□ -0.96
LIMK1-201ENST00000336180 DNAJC30Q96LL9 226 aa9.04□□□□□ -0.96
LIMK1-201ENST00000336180 TRAV2A0A0B4J234 112 aa9.04□□□□□ -0.96
LIMK1-201ENST00000336180 LINC00467Q9BRT7 94 aa9.04□□□□□ -0.96
LIMK1-201ENST00000336180 NOTCH1P46531 2555 aa9.04□□□□□ -0.96
LIMK1-201ENST00000336180 A8MWV9 139 aa9.03□□□□□ -0.96
LIMK1-201ENST00000336180 TSPEAR-AS2P59090 65 aa9.03□□□□□ -0.96
LIMK1-201ENST00000336180 APOMO95445 188 aa9.03□□□□□ -0.96
LIMK1-201ENST00000336180 PLNP26678 52 aa9.03□□□□□ -0.96
LIMK1-201ENST00000336180 PMVKQ15126 192 aa9.03□□□□□ -0.96
LIMK1-201ENST00000336180 C20orf203Q8NBC4 194 aa9.03□□□□□ -0.96
LIMK1-201ENST00000336180 KIR2DL5BQ8NHK3 375 aa9.03□□□□□ -0.96
LIMK1-201ENST00000336180 A0A096LPF7 62 aa9.03□□□□□ -0.96
LIMK1-201ENST00000336180 IGKV3OR2-268A0A0C4DH90 116 aa9.03□□□□□ -0.96
LIMK1-201ENST00000336180 F8W1H4 67 aa9.03□□□□□ -0.96
LIMK1-201ENST00000336180 EDA2RQ9HAV5 297 aa9.03□□□□□ -0.96
LIMK1-201ENST00000336180 NHP2Q9NX24 153 aaKnown RBP9.03□□□□□ -0.96
LIMK1-201ENST00000336180 TRBV6-5A0A0K0K1A5 114 aa9.02□□□□□ -0.97
LIMK1-201ENST00000336180 A0A1B0GWB2 263 aa9.02□□□□□ -0.97
LIMK1-201ENST00000336180 ZNF815PA8K554 130 aa9.02□□□□□ -0.97
LIMK1-201ENST00000336180 CRLF1O75462 422 aa9.02□□□□□ -0.97
LIMK1-201ENST00000336180 COL6A5A8TX70 2615 aa9.02□□□□□ -0.97
LIMK1-201ENST00000336180 CYSRT1A8MQ03 144 aa9.01□□□□□ -0.97
LIMK1-201ENST00000336180 TTC32Q5I0X7 151 aa9.01□□□□□ -0.97
LIMK1-201ENST00000336180 SCGB1D4Q6XE38 83 aa9.01□□□□□ -0.97
LIMK1-201ENST00000336180 HIST1H4GQ99525 98 aa9.01□□□□□ -0.97
LIMK1-201ENST00000336180 BAHCC1Q9P281 2608 aa9.01□□□□□ -0.97
LIMK1-201ENST00000336180 IGLV4-3A0A075B6K6 122 aa9.01□□□□□ -0.97
LIMK1-201ENST00000336180 SLC25A29Q8N8R3 303 aa9.01□□□□□ -0.97
LIMK1-201ENST00000336180 TRAV8-3A0A0A6YYJ7 113 aa9.01□□□□□ -0.97
LIMK1-201ENST00000336180 TRAV12-1A0A0B4J245 112 aa9.01□□□□□ -0.97
LIMK1-201ENST00000336180 FOXI1Q12951 378 aa9□□□□□ -0.97
LIMK1-201ENST00000336180 RRN3P1Q2M238 152 aa9□□□□□ -0.97
LIMK1-201ENST00000336180 BEAN1Q3B7T3 259 aa9□□□□□ -0.97
LIMK1-201ENST00000336180 NDUFA11Q86Y39 141 aa9□□□□□ -0.97
LIMK1-201ENST00000336180 DEFB135Q30KP9 77 aa8.99□□□□□ -0.97
LIMK1-201ENST00000336180 PLAC8L1A1L4L8 177 aa8.99□□□□□ -0.97
LIMK1-201ENST00000336180 C9JAW5 83 aa8.99□□□□□ -0.97
LIMK1-201ENST00000336180 RS1O15537 224 aa8.99□□□□□ -0.97
LIMK1-201ENST00000336180 TMEM263Q8WUH6 116 aaKnown RBP8.99□□□□□ -0.97
LIMK1-201ENST00000336180 FAM104AQ969W3 186 aa8.99□□□□□ -0.97
LIMK1-201ENST00000336180 CHCHD7Q9BUK0 85 aa8.99□□□□□ -0.97
LIMK1-201ENST00000336180 IFITM1P13164 125 aa8.98□□□□□ -0.97
LIMK1-201ENST00000336180 GAGE2BQ13066 116 aa8.98□□□□□ -0.97
LIMK1-201ENST00000336180 GAGE2EQ4V326 116 aa8.98□□□□□ -0.97
LIMK1-201ENST00000336180 TMEM101Q96IK0 257 aa8.98□□□□□ -0.97
LIMK1-201ENST00000336180 GAGE2DQ9UEU5 116 aa8.98□□□□□ -0.97
LIMK1-201ENST00000336180 MYMXA0A1B0GTQ4 84 aa8.98□□□□□ -0.97
LIMK1-201ENST00000336180 NPC2P61916 151 aa8.98□□□□□ -0.97
LIMK1-201ENST00000336180 RHODO00212 210 aa8.97□□□□□ -0.97
LIMK1-201ENST00000336180 TMEM126AQ9H061 195 aa8.97□□□□□ -0.97
LIMK1-201ENST00000336180 TRGV4A0A0C4DH28 118 aa8.97□□□□□ -0.97
LIMK1-201ENST00000336180 TIMM17AQ99595 171 aa8.97□□□□□ -0.97
LIMK1-201ENST00000336180 DGAT2L7PQ6IED9 249 aa8.97□□□□□ -0.97
LIMK1-201ENST00000336180 NFE4Q86UQ8 179 aa8.97□□□□□ -0.97
LIMK1-201ENST00000336180 CSNK1G2-AS1Q8NCQ2 148 aa8.97□□□□□ -0.97
LIMK1-201ENST00000336180 C1orf43Q9BWL3 253 aa8.97□□□□□ -0.97
LIMK1-201ENST00000336180 TRAV13-1A0A0B4J241 112 aa8.96□□□□□ -0.97
LIMK1-201ENST00000336180 A0A0U1RRA0 63 aa8.96□□□□□ -0.97
LIMK1-201ENST00000336180 RHOHQ15669 191 aa8.96□□□□□ -0.97
LIMK1-201ENST00000336180 OR13C6PQ8NH95 151 aa8.96□□□□□ -0.97
LIMK1-201ENST00000336180 SMIM13P0DJ93 91 aa8.96□□□□□ -0.98
LIMK1-201ENST00000336180 SRSF9Q13242 221 aaKnown RBP eCLIP8.96□□□□□ -0.98
LIMK1-201ENST00000336180 OXLD1Q5BKU9 147 aa8.96□□□□□ -0.98
LIMK1-201ENST00000336180 HRCT1Q6UXD1 115 aa8.96□□□□□ -0.98
LIMK1-201ENST00000336180 NTM-AS1Q6ZSK4 140 aa8.96□□□□□ -0.98
LIMK1-201ENST00000336180 TMEM141Q96I45 108 aa8.96□□□□□ -0.98
LIMK1-201ENST00000336180 PKIGQ9Y2B9 76 aa8.96□□□□□ -0.98
LIMK1-201ENST00000336180 E9PLD3 99 aa8.95□□□□□ -0.98
LIMK1-201ENST00000336180 ZNF22P17026 224 aaPredicted RBP8.95□□□□□ -0.98
LIMK1-201ENST00000336180 K7EQD1 137 aa8.95□□□□□ -0.98
LIMK1-201ENST00000336180 MRAPQ8TCY5 172 aa8.95□□□□□ -0.98
LIMK1-201ENST00000336180 HTN3P15516 51 aa8.94□□□□□ -0.98
LIMK1-201ENST00000336180 CEND1Q8N111 149 aa8.94□□□□□ -0.98
LIMK1-201ENST00000336180 ZNF625Q96I27 306 aaPredicted RBP8.94□□□□□ -0.98
LIMK1-201ENST00000336180 UBE2D4Q9Y2X8 147 aa8.94□□□□□ -0.98
LIMK1-201ENST00000336180 TRBV7-3A0A075B6L6 115 aa8.94□□□□□ -0.98
LIMK1-201ENST00000336180 TRAV4A0A0B4J268 109 aa8.94□□□□□ -0.98
LIMK1-201ENST00000336180 A0A0J9YY99 117 aa8.94□□□□□ -0.98
LIMK1-201ENST00000336180 C4orf26Q17RF5 130 aa8.94□□□□□ -0.98
LIMK1-201ENST00000336180 KLK5Q9Y337 293 aaPredicted RBP8.93□□□□□ -0.98
LIMK1-201ENST00000336180 RPL36AP83881 106 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms