RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 CLPSL2Q6UWE3 100 aa11.52□□□□□ -0.56
PDGFB-201ENST00000331163 CHCHD5Q9BSY4 110 aa11.52□□□□□ -0.56
PDGFB-201ENST00000331163 LOC100131303A0A0U1RQF7 123 aa11.52□□□□□ -0.57
PDGFB-201ENST00000331163 A6NJY4 79 aa11.51□□□□□ -0.57
PDGFB-201ENST00000331163 OPRPNQ99935 248 aaPredicted RBP11.51□□□□□ -0.57
PDGFB-201ENST00000331163 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.51□□□□□ -0.57
PDGFB-201ENST00000331163 IGKV2-29A2NJV5 120 aaPredicted RBP11.51□□□□□ -0.57
PDGFB-201ENST00000331163 SMCPP49901 116 aaPredicted RBP11.51□□□□□ -0.57
PDGFB-201ENST00000331163 C2orf66Q6UXQ4 117 aa11.51□□□□□ -0.57
PDGFB-201ENST00000331163 Q6ZUT4 128 aa11.51□□□□□ -0.57
PDGFB-201ENST00000331163 TRBV7-3A0A075B6L6 115 aa11.51□□□□□ -0.57
PDGFB-201ENST00000331163 PRO0461Q9UI25 63 aa11.51□□□□□ -0.57
PDGFB-201ENST00000331163 UBE2L6O14933 153 aa11.5□□□□□ -0.57
PDGFB-201ENST00000331163 TSPAN13O95857 204 aa11.5□□□□□ -0.57
PDGFB-201ENST00000331163 SMIM2Q9BVW6 85 aa11.5□□□□□ -0.57
PDGFB-201ENST00000331163 CDIP1Q9H305 208 aa11.5□□□□□ -0.57
PDGFB-201ENST00000331163 A8MWV9 139 aa11.49□□□□□ -0.57
PDGFB-201ENST00000331163 C9JAW5 83 aa11.49□□□□□ -0.57
PDGFB-201ENST00000331163 TP53TG1Q9Y2A0 90 aa11.49□□□□□ -0.57
PDGFB-201ENST00000331163 NRACQ8N912 160 aa11.48□□□□□ -0.57
PDGFB-201ENST00000331163 TCL1BO95988 128 aa11.48□□□□□ -0.57
PDGFB-201ENST00000331163 CFAP126Q5VTH2 177 aa11.48□□□□□ -0.57
PDGFB-201ENST00000331163 RPL36AP83881 106 aaKnown RBP11.48□□□□□ -0.57
PDGFB-201ENST00000331163 TAL2Q16559 108 aa11.48□□□□□ -0.57
PDGFB-201ENST00000331163 RPL36ALQ969Q0 106 aaKnown RBP11.48□□□□□ -0.57
PDGFB-201ENST00000331163 TRAV13-1A0A0B4J241 112 aa11.47□□□□□ -0.57
PDGFB-201ENST00000331163 RASL10AQ92737 203 aa11.47□□□□□ -0.57
PDGFB-201ENST00000331163 IGLV2-18A0A075B6J9 118 aa11.47□□□□□ -0.57
PDGFB-201ENST00000331163 ZNF575Q86XF7 245 aa11.47□□□□□ -0.57
PDGFB-201ENST00000331163 TRAV2A0A0B4J234 112 aa11.46□□□□□ -0.57
PDGFB-201ENST00000331163 ANKRD29Q8N6D5 301 aa11.46□□□□□ -0.57
PDGFB-201ENST00000331163 TMEM263Q8WUH6 116 aaKnown RBP11.46□□□□□ -0.57
PDGFB-201ENST00000331163 GAGE6Q13070 117 aa11.46□□□□□ -0.58
PDGFB-201ENST00000331163 ZFAND6Q6FIF0 208 aa11.46□□□□□ -0.58
PDGFB-201ENST00000331163 PPDPFLQ8WWR9 84 aa11.46□□□□□ -0.58
PDGFB-201ENST00000331163 A0A0U1RRA0 63 aa11.45□□□□□ -0.58
PDGFB-201ENST00000331163 Q6ZSN1 163 aa11.45□□□□□ -0.58
PDGFB-201ENST00000331163 BAALCQ8WXS3 180 aa11.45□□□□□ -0.58
PDGFB-201ENST00000331163 CARD19Q96LW7 228 aa11.45□□□□□ -0.58
PDGFB-201ENST00000331163 IGHV4-28A0A0C4DH34 117 aa11.45□□□□□ -0.58
PDGFB-201ENST00000331163 TENM3Q9P273 2699 aa11.45□□□□□ -0.58
PDGFB-201ENST00000331163 VCYO14598 125 aa11.45□□□□□ -0.58
PDGFB-201ENST00000331163 NPC2P61916 151 aa11.45□□□□□ -0.58
PDGFB-201ENST00000331163 PRSS2P07478 247 aa11.44□□□□□ -0.58
PDGFB-201ENST00000331163 GYPEP15421 78 aa11.44□□□□□ -0.58
PDGFB-201ENST00000331163 ORMDL2Q53FV1 153 aa11.44□□□□□ -0.58
PDGFB-201ENST00000331163 C11orf86A6NJI1 115 aa11.44□□□□□ -0.58
PDGFB-201ENST00000331163 BEAN1Q3B7T3 259 aa11.44□□□□□ -0.58
PDGFB-201ENST00000331163 C16orf74Q96GX8 76 aa11.44□□□□□ -0.58
PDGFB-201ENST00000331163 PAX4O43316 350 aa11.43□□□□□ -0.58
PDGFB-201ENST00000331163 CRYGDP07320 174 aa11.43□□□□□ -0.58
PDGFB-201ENST00000331163 HERVK_113P61574 105 aa11.43□□□□□ -0.58
PDGFB-201ENST00000331163 TEN1Q86WV5 123 aa11.43□□□□□ -0.58
PDGFB-201ENST00000331163 C11orf68Q9H3H3 251 aaKnown RBP11.43□□□□□ -0.58
PDGFB-201ENST00000331163 KRTAP10-11P60412 298 aa11.43□□□□□ -0.58
PDGFB-201ENST00000331163 LYRM7Q5U5X0 104 aa11.43□□□□□ -0.58
PDGFB-201ENST00000331163 SNCGO76070 127 aa11.42□□□□□ -0.58
PDGFB-201ENST00000331163 SPXQ9BT56 116 aa11.42□□□□□ -0.58
PDGFB-201ENST00000331163 TTC32Q5I0X7 151 aa11.42□□□□□ -0.58
PDGFB-201ENST00000331163 SLC25A29Q8N8R3 303 aa11.42□□□□□ -0.58
PDGFB-201ENST00000331163 TOMM7Q9P0U1 55 aa11.42□□□□□ -0.58
PDGFB-201ENST00000331163 LGALS3P17931 250 aaKnown RBP11.41□□□□□ -0.58
PDGFB-201ENST00000331163 NTN5Q8WTR8 489 aaPredicted RBP11.41□□□□□ -0.58
PDGFB-201ENST00000331163 VCX2Q9H322 139 aa11.41□□□□□ -0.58
PDGFB-201ENST00000331163 GAGE2BQ13066 116 aa11.41□□□□□ -0.58
PDGFB-201ENST00000331163 GAGE2EQ4V326 116 aa11.41□□□□□ -0.58
PDGFB-201ENST00000331163 GAGE2DQ9UEU5 116 aa11.41□□□□□ -0.58
PDGFB-201ENST00000331163 SLC25A20O43772 301 aa11.4□□□□□ -0.58
PDGFB-201ENST00000331163 NEXN-AS1Q8NBZ9 246 aa11.4□□□□□ -0.58
PDGFB-201ENST00000331163 ODF3Q96PU9 254 aa11.4□□□□□ -0.59
PDGFB-201ENST00000331163 CNFNQ9BYD5 112 aa11.4□□□□□ -0.59
PDGFB-201ENST00000331163 TRBV7-9A0A0J9YWB2 115 aa11.39□□□□□ -0.59
PDGFB-201ENST00000331163 HERV-K104P63124 156 aa11.39□□□□□ -0.59
PDGFB-201ENST00000331163 C9orf85Q96MD7 179 aa11.39□□□□□ -0.59
PDGFB-201ENST00000331163 PPP1R17O96001 155 aa11.39□□□□□ -0.59
PDGFB-201ENST00000331163 CFC1BP0CG36 223 aa11.39□□□□□ -0.59
PDGFB-201ENST00000331163 CFC1P0CG37 223 aa11.39□□□□□ -0.59
PDGFB-201ENST00000331163 TOMM6Q96B49 74 aa11.39□□□□□ -0.59
PDGFB-201ENST00000331163 IGLV10-54A0A075B6I4 117 aa11.38□□□□□ -0.59
PDGFB-201ENST00000331163 A4D1N5 150 aa11.38□□□□□ -0.59
PDGFB-201ENST00000331163 RHODO00212 210 aa11.38□□□□□ -0.59
PDGFB-201ENST00000331163 FAM19A4Q96LR4 140 aa11.38□□□□□ -0.59
PDGFB-201ENST00000331163 C19orf73Q9NVV2 129 aa11.38□□□□□ -0.59
PDGFB-201ENST00000331163 I3L3M4 83 aa11.38□□□□□ -0.59
PDGFB-201ENST00000331163 SPART-AS1P0CW21 52 aa11.38□□□□□ -0.59
PDGFB-201ENST00000331163 PRO1854Q9UHT4 67 aa11.38□□□□□ -0.59
PDGFB-201ENST00000331163 ERG28Q9UKR5 140 aa11.38□□□□□ -0.59
PDGFB-201ENST00000331163 M0QY20 66 aa11.37□□□□□ -0.59
PDGFB-201ENST00000331163 NANOS2P60321 138 aaKnown RBP11.37□□□□□ -0.59
PDGFB-201ENST00000331163 SMIM20Q8N5G0 67 aa11.37□□□□□ -0.59
PDGFB-201ENST00000331163 CELA1Q9UNI1 258 aa11.37□□□□□ -0.59
PDGFB-201ENST00000331163 TRAV4A0A0B4J268 109 aa11.37□□□□□ -0.59
PDGFB-201ENST00000331163 A0A0J9YWU9 116 aa11.37□□□□□ -0.59
PDGFB-201ENST00000331163 GIG44P09565 113 aaPredicted RBP11.37□□□□□ -0.59
PDGFB-201ENST00000331163 TSPEAR-AS2P59090 65 aa11.37□□□□□ -0.59
PDGFB-201ENST00000331163 ZNF625Q96I27 306 aaPredicted RBP11.37□□□□□ -0.59
PDGFB-201ENST00000331163 TGP01266 2768 aa11.36□□□□□ -0.59
PDGFB-201ENST00000331163 TRAV12-1A0A0B4J245 112 aa11.36□□□□□ -0.59
PDGFB-201ENST00000331163 C10orf126Q8N4M7 172 aa11.35□□□□□ -0.59
PDGFB-201ENST00000331163 K7EQD1 137 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms