RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 CR1P17927 2039 aa13.2□□□□□ -0.3
CLSTN3-202ENST00000331148 C3orf22Q8N5N4 141 aa13.2□□□□□ -0.3
CLSTN3-202ENST00000331148 SPINK13Q1W4C9 94 aa13.19□□□□□ -0.3
CLSTN3-202ENST00000331148 LINC00643Q86TS7 51 aa13.19□□□□□ -0.3
CLSTN3-202ENST00000331148 IGHV3-73A0A0B4J1V6 119 aa13.19□□□□□ -0.3
CLSTN3-202ENST00000331148 LY6EQ16553 131 aa13.19□□□□□ -0.3
CLSTN3-202ENST00000331148 EDA2RQ9HAV5 297 aa13.19□□□□□ -0.3
CLSTN3-202ENST00000331148 A6NDX4 124 aa13.18□□□□□ -0.3
CLSTN3-202ENST00000331148 COX7A2LO14548 114 aa13.18□□□□□ -0.3
CLSTN3-202ENST00000331148 NDUFA7O95182 113 aa13.18□□□□□ -0.3
CLSTN3-202ENST00000331148 K7EMT4 169 aa13.18□□□□□ -0.3
CLSTN3-202ENST00000331148 NDUFA1O15239 70 aa13.18□□□□□ -0.3
CLSTN3-202ENST00000331148 UBE2D4Q9Y2X8 147 aa13.18□□□□□ -0.3
CLSTN3-202ENST00000331148 HELZ2Q9BYK8 2649 aaKnown RBP13.18□□□□□ -0.3
CLSTN3-202ENST00000331148 IGHG2P01859 326 aa13.17□□□□□ -0.3
CLSTN3-202ENST00000331148 PROK1P58294 105 aa13.17□□□□□ -0.3
CLSTN3-202ENST00000331148 LINC00694P0DN24 101 aa13.16□□□□□ -0.3
CLSTN3-202ENST00000331148 CHCHD7Q9BUK0 85 aa13.16□□□□□ -0.3
CLSTN3-202ENST00000331148 ZFHX3Q15911 3703 aa13.16□□□□□ -0.3
CLSTN3-202ENST00000331148 UQCRQO14949 82 aa13.16□□□□□ -0.3
CLSTN3-202ENST00000331148 DNAJC30Q96LL9 226 aa13.16□□□□□ -0.3
CLSTN3-202ENST00000331148 DEFB112Q30KQ8 113 aa13.15□□□□□ -0.3
CLSTN3-202ENST00000331148 LINC00308Q8TCZ7 52 aa13.15□□□□□ -0.3
CLSTN3-202ENST00000331148 SDIM1Q6ZPB5 146 aa13.15□□□□□ -0.3
CLSTN3-202ENST00000331148 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.14□□□□□ -0.31
CLSTN3-202ENST00000331148 IGKV2-29A2NJV5 120 aaPredicted RBP13.14□□□□□ -0.31
CLSTN3-202ENST00000331148 DAZ2Q13117 558 aaKnown RBP13.14□□□□□ -0.31
CLSTN3-202ENST00000331148 DAZ4Q86SG3 579 aaKnown RBP13.14□□□□□ -0.31
CLSTN3-202ENST00000331148 LINC00526Q96FQ7 95 aa13.14□□□□□ -0.31
CLSTN3-202ENST00000331148 DAZ3Q9NR90 486 aaKnown RBP13.14□□□□□ -0.31
CLSTN3-202ENST00000331148 CDKN2A-AS1Q9UH64 79 aa13.14□□□□□ -0.31
CLSTN3-202ENST00000331148 IGLV1-40P01703 118 aa13.14□□□□□ -0.31
CLSTN3-202ENST00000331148 ATP5G1P05496 136 aa13.14□□□□□ -0.31
CLSTN3-202ENST00000331148 SNRPD3P62318 126 aaKnown RBP13.14□□□□□ -0.31
CLSTN3-202ENST00000331148 WFDC11Q8NEX6 87 aa13.14□□□□□ -0.31
CLSTN3-202ENST00000331148 CSPG4Q6UVK1 2322 aa13.13□□□□□ -0.31
CLSTN3-202ENST00000331148 FSHBP01225 129 aa13.13□□□□□ -0.31
CLSTN3-202ENST00000331148 CIRBPQ14011 172 aaKnown RBP13.13□□□□□ -0.31
CLSTN3-202ENST00000331148 Q9UF83 564 aa13.13□□□□□ -0.31
CLSTN3-202ENST00000331148 NBPF19A0A087WUL8 3843 aa13.12□□□□□ -0.31
CLSTN3-202ENST00000331148 HERVK_113P63121 156 aa13.12□□□□□ -0.31
CLSTN3-202ENST00000331148 BEAN1Q3B7T3 259 aa13.12□□□□□ -0.31
CLSTN3-202ENST00000331148 LINC00467Q9BRT7 94 aa13.12□□□□□ -0.31
CLSTN3-202ENST00000331148 IGLV5-45A0A087WSX0 123 aa13.11□□□□□ -0.31
CLSTN3-202ENST00000331148 BLCAPP62952 87 aa13.11□□□□□ -0.31
CLSTN3-202ENST00000331148 Q8N2B8 174 aa13.11□□□□□ -0.31
CLSTN3-202ENST00000331148 PEMTQ9UBM1 199 aa13.11□□□□□ -0.31
CLSTN3-202ENST00000331148 ZANQ9Y493 2812 aa13.11□□□□□ -0.31
CLSTN3-202ENST00000331148 K7EQG2 157 aa13.11□□□□□ -0.31
CLSTN3-202ENST00000331148 IGHV4-59P01825 116 aa13.11□□□□□ -0.31
CLSTN3-202ENST00000331148 TRACP01848 142 aa13.11□□□□□ -0.31
CLSTN3-202ENST00000331148 CXCL5P42830 114 aa13.11□□□□□ -0.31
CLSTN3-202ENST00000331148 C5orf38Q86SI9 138 aa13.11□□□□□ -0.31
CLSTN3-202ENST00000331148 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.1□□□□□ -0.31
CLSTN3-202ENST00000331148 TIRAPP58753 221 aa13.1□□□□□ -0.31
CLSTN3-202ENST00000331148 Q9H8V8 135 aa13.1□□□□□ -0.31
CLSTN3-202ENST00000331148 C22orf24Q9Y442 160 aa13.1□□□□□ -0.31
CLSTN3-202ENST00000331148 BAALC-AS2P0C853 105 aa13.09□□□□□ -0.31
CLSTN3-202ENST00000331148 RBMY1A1P0DJD3 496 aaKnown RBP13.09□□□□□ -0.31
CLSTN3-202ENST00000331148 RBMY1CP0DJD4 496 aa13.09□□□□□ -0.31
CLSTN3-202ENST00000331148 RBMY1FQ15415 496 aaKnown RBP13.09□□□□□ -0.31
CLSTN3-202ENST00000331148 SOSTDC1Q6X4U4 206 aa13.09□□□□□ -0.31
CLSTN3-202ENST00000331148 CSDC2Q9Y534 153 aaKnown RBP13.09□□□□□ -0.31
CLSTN3-202ENST00000331148 KNCNA6PVL3 124 aa13.09□□□□□ -0.31
CLSTN3-202ENST00000331148 Q6ZSN1 163 aa13.09□□□□□ -0.31
CLSTN3-202ENST00000331148 KLK5Q9Y337 293 aaPredicted RBP13.09□□□□□ -0.31
CLSTN3-202ENST00000331148 A0A0U1RRA0 63 aa13.08□□□□□ -0.32
CLSTN3-202ENST00000331148 CFHR3Q02985 330 aa13.08□□□□□ -0.32
CLSTN3-202ENST00000331148 ZNF625Q96I27 306 aaPredicted RBP13.08□□□□□ -0.32
CLSTN3-202ENST00000331148 LOC107984640A0A0U1RRK4 108 aa13.08□□□□□ -0.32
CLSTN3-202ENST00000331148 HTN1P15515 57 aa13.08□□□□□ -0.32
CLSTN3-202ENST00000331148 COX7CP15954 63 aa13.08□□□□□ -0.32
CLSTN3-202ENST00000331148 IGLV5-39A0A0G2JS06 123 aa13.07□□□□□ -0.32
CLSTN3-202ENST00000331148 Q6YL49 198 aa13.07□□□□□ -0.32
CLSTN3-202ENST00000331148 RNF152Q8N8N0 203 aa13.07□□□□□ -0.32
CLSTN3-202ENST00000331148 CREBBPQ92793 2442 aa13.07□□□□□ -0.32
CLSTN3-202ENST00000331148 FAM222AQ5U5X8 452 aa13.06□□□□□ -0.32
CLSTN3-202ENST00000331148 PDZD2O15018 2839 aa13.06□□□□□ -0.32
CLSTN3-202ENST00000331148 IGHV3-38A0A0C4DH36 116 aa13.06□□□□□ -0.32
CLSTN3-202ENST00000331148 COX6A2Q02221 97 aa13.06□□□□□ -0.32
CLSTN3-202ENST00000331148 COPS9Q8WXC6 57 aa13.06□□□□□ -0.32
CLSTN3-202ENST00000331148 FAM218AQ96MZ4 157 aa13.06□□□□□ -0.32
CLSTN3-202ENST00000331148 TEX15Q9BXT5 2789 aa13.06□□□□□ -0.32
CLSTN3-202ENST00000331148 C2orf48Q96LS8 159 aa13.05□□□□□ -0.32
CLSTN3-202ENST00000331148 J3KT08 172 aa13.05□□□□□ -0.32
CLSTN3-202ENST00000331148 INAFM2P0DMQ5 153 aa13.05□□□□□ -0.32
CLSTN3-202ENST00000331148 GAGE2AQ6NT46 116 aa13.05□□□□□ -0.32
CLSTN3-202ENST00000331148 GCN1Q92616 2671 aaKnown RBP13.04□□□□□ -0.32
CLSTN3-202ENST00000331148 HIST1H4AP62805 103 aaKnown RBP13.04□□□□□ -0.32
CLSTN3-202ENST00000331148 A0A1B0GX51 115 aa13.04□□□□□ -0.32
CLSTN3-202ENST00000331148 ITPR3Q14573 2671 aa13.03□□□□□ -0.32
CLSTN3-202ENST00000331148 FASNP49327 2511 aaKnown RBP13.03□□□□□ -0.32
CLSTN3-202ENST00000331148 IGHV3OR16-12A0A075B7B8 117 aa13.02□□□□□ -0.32
CLSTN3-202ENST00000331148 CRYGAP11844 174 aa13.02□□□□□ -0.32
CLSTN3-202ENST00000331148 PRM2P04554 102 aa13.01□□□□□ -0.33
CLSTN3-202ENST00000331148 LINC00242Q5T6M2 205 aa13.01□□□□□ -0.33
CLSTN3-202ENST00000331148 SMIM1B2RUZ4 78 aa13.01□□□□□ -0.33
CLSTN3-202ENST00000331148 ATOX1O00244 68 aa13.01□□□□□ -0.33
CLSTN3-202ENST00000331148 DGAT2L7PQ6IED9 249 aa13.01□□□□□ -0.33
CLSTN3-202ENST00000331148 CCDC168Q8NDH2 2452 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms