RNA–Protein interactions for RNA: ENST00000329629.8

FNDC1-202, Transcript of fibronectin type III domain containing 1, humanhuman

TSL 1 (best)

Gene FNDC1, Length 6,034 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-202ENST00000329629 LY6G6DO95868 133 aa10.5□□□□□ -0.73
FNDC1-202ENST00000329629 SPINK6Q6UWN8 80 aa10.5□□□□□ -0.73
FNDC1-202ENST00000329629 PLA2G2AP14555 144 aa10.5□□□□□ -0.73
FNDC1-202ENST00000329629 FAM19A3Q7Z5A8 133 aa10.5□□□□□ -0.73
FNDC1-202ENST00000329629 TRBV6-8A0A0A6YYG3 113 aa10.5□□□□□ -0.73
FNDC1-202ENST00000329629 Q6ZPA2 131 aa10.5□□□□□ -0.73
FNDC1-202ENST00000329629 NDUFC1O43677 76 aa10.49□□□□□ -0.73
FNDC1-202ENST00000329629 KIAA1549LQ6ZVL6 1849 aa10.49□□□□□ -0.73
FNDC1-202ENST00000329629 MED13Q9UHV7 2174 aa10.49□□□□□ -0.73
FNDC1-202ENST00000329629 KIR2DL5BQ8NHK3 375 aa10.49□□□□□ -0.73
FNDC1-202ENST00000329629 C1orf195Q5TG92 126 aa10.49□□□□□ -0.73
FNDC1-202ENST00000329629 Q8N976 141 aa10.49□□□□□ -0.73
FNDC1-202ENST00000329629 LYRM9A8MSI8 78 aa10.49□□□□□ -0.73
FNDC1-202ENST00000329629 LINC00526Q96FQ7 95 aa10.49□□□□□ -0.73
FNDC1-202ENST00000329629 K7EQG2 157 aa10.49□□□□□ -0.73
FNDC1-202ENST00000329629 LINC00694P0DN24 101 aa10.48□□□□□ -0.73
FNDC1-202ENST00000329629 C22orf34Q6ZV56 151 aa10.48□□□□□ -0.73
FNDC1-202ENST00000329629 DEFB131BA0A096LNP1 70 aa10.48□□□□□ -0.73
FNDC1-202ENST00000329629 C2orf91Q6ZV80 131 aa10.48□□□□□ -0.73
FNDC1-202ENST00000329629 DSCAML1Q8TD84 2053 aa10.48□□□□□ -0.73
FNDC1-202ENST00000329629 SHISA2Q6UWI4 295 aa10.48□□□□□ -0.73
FNDC1-202ENST00000329629 COX7CP15954 63 aa10.48□□□□□ -0.73
FNDC1-202ENST00000329629 XGP55808 180 aa10.47□□□□□ -0.73
FNDC1-202ENST00000329629 Q6ZQY7 126 aa10.47□□□□□ -0.73
FNDC1-202ENST00000329629 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.47□□□□□ -0.73
FNDC1-202ENST00000329629 DEFB114Q30KQ6 69 aa10.47□□□□□ -0.73
FNDC1-202ENST00000329629 C9orf85Q96MD7 179 aa10.47□□□□□ -0.73
FNDC1-202ENST00000329629 SMIM11BQ8TCY0 68 aa10.46□□□□□ -0.73
FNDC1-202ENST00000329629 LINC00482Q8N8I6 264 aa10.46□□□□□ -0.74
FNDC1-202ENST00000329629 YPEL4Q96NS1 127 aa10.46□□□□□ -0.74
FNDC1-202ENST00000329629 FAM208BQ5VWN6 2430 aa10.46□□□□□ -0.74
FNDC1-202ENST00000329629 C11orf71Q6IPW1 123 aa10.45□□□□□ -0.74
FNDC1-202ENST00000329629 Q6ZS46 218 aa10.45□□□□□ -0.74
FNDC1-202ENST00000329629 POM121L12Q8N7R1 296 aa10.45□□□□□ -0.74
FNDC1-202ENST00000329629 SERP1Q9Y6X1 66 aa10.45□□□□□ -0.74
FNDC1-202ENST00000329629 LST1O00453 97 aa10.45□□□□□ -0.74
FNDC1-202ENST00000329629 TSHBP01222 138 aa10.45□□□□□ -0.74
FNDC1-202ENST00000329629 SYCNQ0VAF6 134 aa10.45□□□□□ -0.74
FNDC1-202ENST00000329629 IMUPQ9GZP8 106 aa10.45□□□□□ -0.74
FNDC1-202ENST00000329629 NOTCH3Q9UM47 2321 aa10.45□□□□□ -0.74
FNDC1-202ENST00000329629 PTPRQQ9UMZ3 2332 aa10.44□□□□□ -0.74
FNDC1-202ENST00000329629 RPL37AP8A6NKH3 93 aa10.44□□□□□ -0.74
FNDC1-202ENST00000329629 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.44□□□□□ -0.74
FNDC1-202ENST00000329629 Q8N9L7 120 aa10.44□□□□□ -0.74
FNDC1-202ENST00000329629 SMIM9A6NGZ8 99 aa10.44□□□□□ -0.74
FNDC1-202ENST00000329629 BBC3Q96PG8 261 aaPredicted RBP10.44□□□□□ -0.74
FNDC1-202ENST00000329629 LY6LH3BQJ8 138 aa10.43□□□□□ -0.74
FNDC1-202ENST00000329629 ZNF106Q9H2Y7 1883 aaKnown RBP10.43□□□□□ -0.74
FNDC1-202ENST00000329629 EIF4EBP1Q13541 118 aaPredicted RBP10.43□□□□□ -0.74
FNDC1-202ENST00000329629 LOC100131303A0A0U1RQF7 123 aa10.43□□□□□ -0.74
FNDC1-202ENST00000329629 FSTL3O95633 263 aa10.43□□□□□ -0.74
FNDC1-202ENST00000329629 TTC28Q96AY4 2481 aa10.42□□□□□ -0.74
FNDC1-202ENST00000329629 NRACQ8N912 160 aa10.42□□□□□ -0.74
FNDC1-202ENST00000329629 CEP192Q8TEP8 1941 aa10.42□□□□□ -0.74
FNDC1-202ENST00000329629 HILS1P60008 231 aa10.42□□□□□ -0.74
FNDC1-202ENST00000329629 TRBV6-4A0A1B0GX49 114 aa10.42□□□□□ -0.74
FNDC1-202ENST00000329629 IGLV2-11P01706 119 aa10.42□□□□□ -0.74
FNDC1-202ENST00000329629 C10orf99Q6UWK7 81 aa10.42□□□□□ -0.74
FNDC1-202ENST00000329629 Q6ZSV7 163 aa10.41□□□□□ -0.74
FNDC1-202ENST00000329629 IGLV9-49A0A0B4J1Y8 123 aa10.41□□□□□ -0.74
FNDC1-202ENST00000329629 LINC00574Q9H8X3 128 aa10.41□□□□□ -0.74
FNDC1-202ENST00000329629 M0QXV9 152 aa10.41□□□□□ -0.74
FNDC1-202ENST00000329629 M0R378 163 aa10.41□□□□□ -0.74
FNDC1-202ENST00000329629 CELA1Q9UNI1 258 aa10.41□□□□□ -0.74
FNDC1-202ENST00000329629 UBE2D4Q9Y2X8 147 aa10.41□□□□□ -0.74
FNDC1-202ENST00000329629 PYGO1Q9Y3Y4 419 aa10.41□□□□□ -0.74
FNDC1-202ENST00000329629 DHRS4-AS1Q9P1J3 65 aa10.4□□□□□ -0.74
FNDC1-202ENST00000329629 GAS8-AS1O95177 125 aa10.39□□□□□ -0.75
FNDC1-202ENST00000329629 SOSTDC1Q6X4U4 206 aa10.39□□□□□ -0.75
FNDC1-202ENST00000329629 PRM2P04554 102 aa10.39□□□□□ -0.75
FNDC1-202ENST00000329629 MIFP14174 115 aa10.39□□□□□ -0.75
FNDC1-202ENST00000329629 PRR9Q5T870 116 aa10.39□□□□□ -0.75
FNDC1-202ENST00000329629 CRIP3Q6Q6R5 217 aa10.39□□□□□ -0.75
FNDC1-202ENST00000329629 SHANK1Q9Y566 2161 aa10.39□□□□□ -0.75
FNDC1-202ENST00000329629 RNASE3P12724 160 aaKnown RBP10.38□□□□□ -0.75
FNDC1-202ENST00000329629 Q6Q795 121 aa10.38□□□□□ -0.75
FNDC1-202ENST00000329629 Q6JHZ5 121 aa10.38□□□□□ -0.75
FNDC1-202ENST00000329629 CD164L2Q6UWJ8 174 aa10.38□□□□□ -0.75
FNDC1-202ENST00000329629 CLUHP3Q96NS8 147 aa10.38□□□□□ -0.75
FNDC1-202ENST00000329629 BDP1A6H8Y1 2624 aa10.38□□□□□ -0.75
FNDC1-202ENST00000329629 LINC00959A0A1B0GUT2 108 aa10.38□□□□□ -0.75
FNDC1-202ENST00000329629 IGLV2-18A0A075B6J9 118 aa10.37□□□□□ -0.75
FNDC1-202ENST00000329629 UBE2D1P51668 147 aa10.37□□□□□ -0.75
FNDC1-202ENST00000329629 NANOS2P60321 138 aaKnown RBP10.37□□□□□ -0.75
FNDC1-202ENST00000329629 EBI3Q14213 229 aa10.37□□□□□ -0.75
FNDC1-202ENST00000329629 PLCE1Q9P212 2302 aa10.37□□□□□ -0.75
FNDC1-202ENST00000329629 C11orf21Q9P2W6 132 aa10.37□□□□□ -0.75
FNDC1-202ENST00000329629 C7orf33Q8WU49 177 aa10.36□□□□□ -0.75
FNDC1-202ENST00000329629 ZNF73O43830 326 aaPredicted RBP10.35□□□□□ -0.75
FNDC1-202ENST00000329629 SMIM26A0A096LP01 95 aa10.35□□□□□ -0.75
FNDC1-202ENST00000329629 M0R2N4 97 aa10.35□□□□□ -0.75
FNDC1-202ENST00000329629 MED13LQ71F56 2210 aa10.35□□□□□ -0.75
FNDC1-202ENST00000329629 MUC22E2RYF6 1773 aaPredicted RBP10.35□□□□□ -0.75
FNDC1-202ENST00000329629 ZNF706Q9Y5V0 76 aaPredicted RBP10.34□□□□□ -0.75
FNDC1-202ENST00000329629 PCDH15Q96QU1 1955 aa10.34□□□□□ -0.75
FNDC1-202ENST00000329629 WFDC10AQ9H1F0 79 aa10.34□□□□□ -0.75
FNDC1-202ENST00000329629 CREBBPQ92793 2442 aa10.34□□□□□ -0.75
FNDC1-202ENST00000329629 IGLV4-69A0A075B6H9 119 aa10.34□□□□□ -0.75
FNDC1-202ENST00000329629 A0A087WVE0 104 aa10.34□□□□□ -0.75
FNDC1-202ENST00000329629 NUP210LQ5VU65 1888 aa10.33□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms