RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 TP73-AS1Q9UF72 201 aa12.71□□□□□ -0.37
SMCHD1-201ENST00000320876 SMIM9A6NGZ8 99 aa12.71□□□□□ -0.37
SMCHD1-201ENST00000320876 SERP1Q9Y6X1 66 aa12.71□□□□□ -0.37
SMCHD1-201ENST00000320876 CRYGDP07320 174 aa12.71□□□□□ -0.37
SMCHD1-201ENST00000320876 DEFB1P60022 68 aa12.71□□□□□ -0.37
SMCHD1-201ENST00000320876 ZNF22P17026 224 aaPredicted RBP12.71□□□□□ -0.38
SMCHD1-201ENST00000320876 FAM222AQ5U5X8 452 aa12.71□□□□□ -0.38
SMCHD1-201ENST00000320876 MRPS12O15235 138 aaKnown RBP12.71□□□□□ -0.38
SMCHD1-201ENST00000320876 IGFL2Q6UWQ7 119 aa12.71□□□□□ -0.38
SMCHD1-201ENST00000320876 LINC00322Q6ZN03 302 aaPredicted RBP12.7□□□□□ -0.38
SMCHD1-201ENST00000320876 TRBV6-5A0A0K0K1A5 114 aa12.7□□□□□ -0.38
SMCHD1-201ENST00000320876 PIP4P1Q86T03 277 aa12.7□□□□□ -0.38
SMCHD1-201ENST00000320876 CCDC179H3BU77 68 aa12.7□□□□□ -0.38
SMCHD1-201ENST00000320876 DHRS4-AS1Q9P1J3 65 aa12.7□□□□□ -0.38
SMCHD1-201ENST00000320876 CCDC140Q96MF4 163 aa12.7□□□□□ -0.38
SMCHD1-201ENST00000320876 IL17DQ8TAD2 202 aa12.7□□□□□ -0.38
SMCHD1-201ENST00000320876 COX17Q14061 63 aa12.7□□□□□ -0.38
SMCHD1-201ENST00000320876 FAM19A1Q7Z5A9 133 aa12.69□□□□□ -0.38
SMCHD1-201ENST00000320876 TP53TG3Q9ULZ0 132 aa12.69□□□□□ -0.38
SMCHD1-201ENST00000320876 PIEZO2Q9H5I5 2752 aa12.69□□□□□ -0.38
SMCHD1-201ENST00000320876 C11orf45Q8TAV5 145 aa12.69□□□□□ -0.38
SMCHD1-201ENST00000320876 ZFP36P26651 326 aaKnown RBP12.69□□□□□ -0.38
SMCHD1-201ENST00000320876 CFAP126Q5VTH2 177 aa12.69□□□□□ -0.38
SMCHD1-201ENST00000320876 COL4A4P53420 1690 aaPredicted RBP12.69□□□□□ -0.38
SMCHD1-201ENST00000320876 A0A087WZ39 114 aa12.68□□□□□ -0.38
SMCHD1-201ENST00000320876 Q8N7P7 452 aa12.68□□□□□ -0.38
SMCHD1-201ENST00000320876 LST1O00453 97 aa12.68□□□□□ -0.38
SMCHD1-201ENST00000320876 IGF2-ASQ6U949 168 aa12.68□□□□□ -0.38
SMCHD1-201ENST00000320876 ZFYVE26Q68DK2 2539 aa12.68□□□□□ -0.38
SMCHD1-201ENST00000320876 Q8N9L7 120 aa12.67□□□□□ -0.38
SMCHD1-201ENST00000320876 M0QY20 66 aa12.67□□□□□ -0.38
SMCHD1-201ENST00000320876 TRBV27A0A0K0K1C4 114 aa12.66□□□□□ -0.38
SMCHD1-201ENST00000320876 Q6ZTI0 123 aa12.66□□□□□ -0.38
SMCHD1-201ENST00000320876 C9orf85Q96MD7 179 aa12.66□□□□□ -0.38
SMCHD1-201ENST00000320876 LINC00574Q9H8X3 128 aa12.66□□□□□ -0.38
SMCHD1-201ENST00000320876 A0A0J9YWU9 116 aa12.65□□□□□ -0.38
SMCHD1-201ENST00000320876 MAPKAPK5-AS1Q8N8E1 139 aa12.65□□□□□ -0.38
SMCHD1-201ENST00000320876 C2orf91Q6ZV80 131 aa12.65□□□□□ -0.38
SMCHD1-201ENST00000320876 LINC00694P0DN24 101 aa12.65□□□□□ -0.39
SMCHD1-201ENST00000320876 ZNF706Q9Y5V0 76 aaPredicted RBP12.65□□□□□ -0.39
SMCHD1-201ENST00000320876 PYGO1Q9Y3Y4 419 aa12.64□□□□□ -0.39
SMCHD1-201ENST00000320876 TRBV6-8A0A0A6YYG3 113 aa12.64□□□□□ -0.39
SMCHD1-201ENST00000320876 Q6Q795 121 aa12.64□□□□□ -0.39
SMCHD1-201ENST00000320876 SMIM26A0A096LP01 95 aa12.63□□□□□ -0.39
SMCHD1-201ENST00000320876 MIFP14174 115 aa12.63□□□□□ -0.39
SMCHD1-201ENST00000320876 C6orf99Q4VX62 202 aa12.63□□□□□ -0.39
SMCHD1-201ENST00000320876 YPEL4Q96NS1 127 aa12.62□□□□□ -0.39
SMCHD1-201ENST00000320876 COL4A3Q01955 1670 aa12.62□□□□□ -0.39
SMCHD1-201ENST00000320876 PMAIP1Q13794 54 aa12.62□□□□□ -0.39
SMCHD1-201ENST00000320876 FAM19A5Q7Z5A7 132 aaPredicted RBP12.61□□□□□ -0.39
SMCHD1-201ENST00000320876 DCANP1Q8TF63 244 aa12.61□□□□□ -0.39
SMCHD1-201ENST00000320876 RNF185Q96GF1 192 aa12.61□□□□□ -0.39
SMCHD1-201ENST00000320876 MBD6Q96DN6 1003 aa12.61□□□□□ -0.39
SMCHD1-201ENST00000320876 ODF3BA8MYP8 253 aa12.61□□□□□ -0.39
SMCHD1-201ENST00000320876 ZFAND3Q9H8U3 227 aa12.61□□□□□ -0.39
SMCHD1-201ENST00000320876 Q6JHZ5 121 aa12.61□□□□□ -0.39
SMCHD1-201ENST00000320876 A0A096LNI7 61 aa12.61□□□□□ -0.39
SMCHD1-201ENST00000320876 DAZAP2Q15038 168 aaPredicted RBP12.6□□□□□ -0.39
SMCHD1-201ENST00000320876 A6NDX4 124 aa12.59□□□□□ -0.39
SMCHD1-201ENST00000320876 DNAJC9-AS1A6NH13 148 aa12.59□□□□□ -0.39
SMCHD1-201ENST00000320876 XGP55808 180 aa12.59□□□□□ -0.39
SMCHD1-201ENST00000320876 NRACQ8N912 160 aa12.59□□□□□ -0.39
SMCHD1-201ENST00000320876 TRAV7A0A075B6U4 112 aa12.58□□□□□ -0.4
SMCHD1-201ENST00000320876 TRBV6-4A0A1B0GX49 114 aa12.58□□□□□ -0.4
SMCHD1-201ENST00000320876 IGKV2-28A0A075B6P5 120 aa12.57□□□□□ -0.4
SMCHD1-201ENST00000320876 IGKV2D-28P01615 120 aa12.57□□□□□ -0.4
SMCHD1-201ENST00000320876 XAGE1AQ9HD64 81 aa12.57□□□□□ -0.4
SMCHD1-201ENST00000320876 CD164L2Q6UWJ8 174 aa12.57□□□□□ -0.4
SMCHD1-201ENST00000320876 MUC7Q8TAX7 377 aa12.57□□□□□ -0.4
SMCHD1-201ENST00000320876 LRCOL1A6NCL2 159 aa12.57□□□□□ -0.4
SMCHD1-201ENST00000320876 FAM30AQ9NZY2 134 aa12.57□□□□□ -0.4
SMCHD1-201ENST00000320876 M0R378 163 aa12.57□□□□□ -0.4
SMCHD1-201ENST00000320876 SMIM11BQ8TCY0 68 aa12.57□□□□□ -0.4
SMCHD1-201ENST00000320876 C7orf33Q8WU49 177 aa12.57□□□□□ -0.4
SMCHD1-201ENST00000320876 TLN2Q9Y4G6 2542 aa12.57□□□□□ -0.4
SMCHD1-201ENST00000320876 IGF1P05019 195 aa12.57□□□□□ -0.4
SMCHD1-201ENST00000320876 WFDC13Q8IUB5 93 aa12.57□□□□□ -0.4
SMCHD1-201ENST00000320876 K7EQG2 157 aa12.57□□□□□ -0.4
SMCHD1-201ENST00000320876 ADORA2A-AS1P86434 159 aa12.56□□□□□ -0.4
SMCHD1-201ENST00000320876 HILS1P60008 231 aa12.56□□□□□ -0.4
SMCHD1-201ENST00000320876 Q6ZQY7 126 aa12.56□□□□□ -0.4
SMCHD1-201ENST00000320876 C22orf34Q6ZV56 151 aa12.55□□□□□ -0.4
SMCHD1-201ENST00000320876 CRIP1P50238 77 aa12.55□□□□□ -0.4
SMCHD1-201ENST00000320876 TSHBP01222 138 aa12.54□□□□□ -0.4
SMCHD1-201ENST00000320876 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.54□□□□□ -0.4
SMCHD1-201ENST00000320876 SYCNQ0VAF6 134 aa12.54□□□□□ -0.4
SMCHD1-201ENST00000320876 M0QXV9 152 aa12.53□□□□□ -0.4
SMCHD1-201ENST00000320876 TNFRSF13BO14836 293 aaPredicted RBP12.53□□□□□ -0.4
SMCHD1-201ENST00000320876 IGLV2-11P01706 119 aa12.53□□□□□ -0.4
SMCHD1-201ENST00000320876 EIF4EBP1Q13541 118 aaPredicted RBP12.53□□□□□ -0.4
SMCHD1-201ENST00000320876 ZNF295-AS1Q8N0V1 137 aa12.53□□□□□ -0.4
SMCHD1-201ENST00000320876 DEFB131BA0A096LNP1 70 aa12.53□□□□□ -0.4
SMCHD1-201ENST00000320876 PRR4Q16378 134 aa12.53□□□□□ -0.4
SMCHD1-201ENST00000320876 ZNF73O43830 326 aaPredicted RBP12.53□□□□□ -0.4
SMCHD1-201ENST00000320876 WFDC10AQ9H1F0 79 aa12.53□□□□□ -0.4
SMCHD1-201ENST00000320876 DEFB114Q30KQ6 69 aa12.52□□□□□ -0.4
SMCHD1-201ENST00000320876 UBE2D2P62837 147 aa12.52□□□□□ -0.4
SMCHD1-201ENST00000320876 FN1P02751 2386 aaKnown RBP12.52□□□□□ -0.41
SMCHD1-201ENST00000320876 HRCT1Q6UXD1 115 aa12.52□□□□□ -0.41
SMCHD1-201ENST00000320876 CLUHP3Q96NS8 147 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms