RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 DAZ3Q9NR90 486 aaKnown RBP5.64□□□□□ -1.51
CDHR3-201ENST00000317716 CDKN2A-AS1Q9UH64 79 aa5.64□□□□□ -1.51
CDHR3-201ENST00000317716 IGLV2-18A0A075B6J9 118 aa5.63□□□□□ -1.51
CDHR3-201ENST00000317716 A0A096LPF7 62 aa5.63□□□□□ -1.51
CDHR3-201ENST00000317716 FAM223BA6NKX1 122 aa5.63□□□□□ -1.51
CDHR3-201ENST00000317716 RNASE3P12724 160 aaKnown RBP5.63□□□□□ -1.51
CDHR3-201ENST00000317716 HTN3P15516 51 aa5.63□□□□□ -1.51
CDHR3-201ENST00000317716 UBE2D3P61077 147 aa5.63□□□□□ -1.51
CDHR3-201ENST00000317716 UBE2D2P62837 147 aa5.63□□□□□ -1.51
CDHR3-201ENST00000317716 PIK3CD-AS1Q5SR53 167 aa5.63□□□□□ -1.51
CDHR3-201ENST00000317716 FAM223AQ8IWN6 122 aa5.63□□□□□ -1.51
CDHR3-201ENST00000317716 PEMTQ9UBM1 199 aa5.63□□□□□ -1.51
CDHR3-201ENST00000317716 NBPF19A0A087WUL8 3843 aa5.63□□□□□ -1.51
CDHR3-201ENST00000317716 F8W735 103 aaPredicted RBP5.63□□□□□ -1.51
CDHR3-201ENST00000317716 SLPIP03973 132 aa5.63□□□□□ -1.51
CDHR3-201ENST00000317716 INAFM2P0DMQ5 153 aa5.63□□□□□ -1.51
CDHR3-201ENST00000317716 RPL35AP18077 110 aaKnown RBP5.63□□□□□ -1.51
CDHR3-201ENST00000317716 RPL36AP83881 106 aaKnown RBP5.63□□□□□ -1.51
CDHR3-201ENST00000317716 C5orf38Q86SI9 138 aa5.63□□□□□ -1.51
CDHR3-201ENST00000317716 APRG1Q8IVJ8 170 aa5.63□□□□□ -1.51
CDHR3-201ENST00000317716 RPL36ALQ969Q0 106 aaKnown RBP5.63□□□□□ -1.51
CDHR3-201ENST00000317716 ZNF415Q09FC8 603 aa5.63□□□□□ -1.51
CDHR3-201ENST00000317716 STHQ8IWL8 128 aa5.63□□□□□ -1.51
CDHR3-201ENST00000317716 IGLV4-3A0A075B6K6 122 aa5.62□□□□□ -1.51
CDHR3-201ENST00000317716 IGHV4-61A0A0C4DH41 118 aa5.62□□□□□ -1.51
CDHR3-201ENST00000317716 H7C423 109 aa5.62□□□□□ -1.51
CDHR3-201ENST00000317716 PRB2P02812 416 aaPredicted RBP5.62□□□□□ -1.51
CDHR3-201ENST00000317716 MRPL53Q96EL3 112 aaKnown RBP5.62□□□□□ -1.51
CDHR3-201ENST00000317716 RAI1Q7Z5J4 1906 aaPredicted RBP5.62□□□□□ -1.51
CDHR3-201ENST00000317716 H3BT86 120 aa5.62□□□□□ -1.51
CDHR3-201ENST00000317716 SOCS3O14543 225 aa5.62□□□□□ -1.51
CDHR3-201ENST00000317716 IGHV4-38-2P0DP08 117 aa5.62□□□□□ -1.51
CDHR3-201ENST00000317716 IGLV4-69A0A075B6H9 119 aa5.62□□□□□ -1.51
CDHR3-201ENST00000317716 IGHV4-30-2A0A087WSY4 118 aa5.62□□□□□ -1.51
CDHR3-201ENST00000317716 TMEM223A0PJW6 202 aa5.62□□□□□ -1.51
CDHR3-201ENST00000317716 LECT2O14960 151 aa5.62□□□□□ -1.51
CDHR3-201ENST00000317716 C1orf43Q9BWL3 253 aa5.62□□□□□ -1.51
CDHR3-201ENST00000317716 DEFB130BP0DP73 79 aa5.61□□□□□ -1.51
CDHR3-201ENST00000317716 DEFB130AP0DP74 79 aa5.61□□□□□ -1.51
CDHR3-201ENST00000317716 TMEM263Q8WUH6 116 aaKnown RBP5.61□□□□□ -1.51
CDHR3-201ENST00000317716 USMG5Q96IX5 58 aa5.61□□□□□ -1.51
CDHR3-201ENST00000317716 A0A0B4J2C4 111 aa5.61□□□□□ -1.51
CDHR3-201ENST00000317716 IGHV1-58A0A0C4DH39 117 aa5.61□□□□□ -1.51
CDHR3-201ENST00000317716 J3KT08 172 aa5.61□□□□□ -1.51
CDHR3-201ENST00000317716 WFDC11Q8NEX6 87 aa5.61□□□□□ -1.51
CDHR3-201ENST00000317716 LENEPQ9Y5L5 61 aa5.61□□□□□ -1.51
CDHR3-201ENST00000317716 TRAV23DV6A0A075B6W5 121 aa5.61□□□□□ -1.51
CDHR3-201ENST00000317716 C10orf99Q6UWK7 81 aa5.61□□□□□ -1.51
CDHR3-201ENST00000317716 CNFNQ9BYD5 112 aa5.61□□□□□ -1.51
CDHR3-201ENST00000317716 CRYGDP07320 174 aa5.6□□□□□ -1.51
CDHR3-201ENST00000317716 MIAQ16674 131 aa5.6□□□□□ -1.51
CDHR3-201ENST00000317716 S100A7L2Q5SY68 101 aa5.6□□□□□ -1.51
CDHR3-201ENST00000317716 ADAMTSL4-AS1Q5T5F5 129 aa5.6□□□□□ -1.51
CDHR3-201ENST00000317716 RNF152Q8N8N0 203 aa5.6□□□□□ -1.51
CDHR3-201ENST00000317716 U3KQE9 123 aa5.6□□□□□ -1.51
CDHR3-201ENST00000317716 NF1P21359 2839 aa5.6□□□□□ -1.51
CDHR3-201ENST00000317716 A0A087WVE0 104 aa5.6□□□□□ -1.51
CDHR3-201ENST00000317716 LY6LH3BQJ8 138 aa5.6□□□□□ -1.51
CDHR3-201ENST00000317716 IGHV1-69P01742 117 aa5.6□□□□□ -1.51
CDHR3-201ENST00000317716 C5orf56Q8N8D9 126 aa5.6□□□□□ -1.51
CDHR3-201ENST00000317716 SMR3AQ99954 134 aa5.6□□□□□ -1.51
CDHR3-201ENST00000317716 NDUFA7O95182 113 aa5.6□□□□□ -1.51
CDHR3-201ENST00000317716 TMEM86BQ8N661 226 aa5.6□□□□□ -1.51
CDHR3-201ENST00000317716 POM121L12Q8N7R1 296 aa5.6□□□□□ -1.51
CDHR3-201ENST00000317716 WFDC9Q8NEX5 89 aa5.6□□□□□ -1.51
CDHR3-201ENST00000317716 DSCR8Q96T75 97 aa5.6□□□□□ -1.51
CDHR3-201ENST00000317716 SND1-IT1Q9HBX3 110 aa5.6□□□□□ -1.51
CDHR3-201ENST00000317716 IGIPA6NJ69 53 aa5.59□□□□□ -1.51
CDHR3-201ENST00000317716 TSHBP01222 138 aa5.59□□□□□ -1.51
CDHR3-201ENST00000317716 SRSF2Q01130 221 aaKnown RBP5.59□□□□□ -1.51
CDHR3-201ENST00000317716 LINC00467Q9BRT7 94 aa5.59□□□□□ -1.51
CDHR3-201ENST00000317716 ZFHX3Q15911 3703 aa5.59□□□□□ -1.51
CDHR3-201ENST00000317716 COL6A5A8TX70 2615 aa5.59□□□□□ -1.51
CDHR3-201ENST00000317716 MIR7-3HGQ8N6C7 128 aa5.59□□□□□ -1.51
CDHR3-201ENST00000317716 IGHV4-59P01825 116 aa5.59□□□□□ -1.52
CDHR3-201ENST00000317716 MRAPQ8TCY5 172 aa5.59□□□□□ -1.52
CDHR3-201ENST00000317716 IGHV4-4A0A075B6R2 117 aa5.58□□□□□ -1.52
CDHR3-201ENST00000317716 M0QY20 66 aa5.58□□□□□ -1.52
CDHR3-201ENST00000317716 NCR3O14931 201 aa5.58□□□□□ -1.52
CDHR3-201ENST00000317716 MALP21145 153 aa5.58□□□□□ -1.52
CDHR3-201ENST00000317716 XCL1P47992 114 aa5.58□□□□□ -1.52
CDHR3-201ENST00000317716 POLR2KP53803 58 aaKnown RBP5.58□□□□□ -1.52
CDHR3-201ENST00000317716 FBXL19-AS1Q494R0 122 aa5.58□□□□□ -1.52
CDHR3-201ENST00000317716 LINC00643Q86TS7 51 aa5.58□□□□□ -1.52
CDHR3-201ENST00000317716 GPHB5Q86YW7 130 aa5.58□□□□□ -1.52
CDHR3-201ENST00000317716 C20orf197Q8N268 126 aa5.58□□□□□ -1.52
CDHR3-201ENST00000317716 VSIG2Q96IQ7 327 aa5.58□□□□□ -1.52
CDHR3-201ENST00000317716 STAB1Q9NY15 2570 aa5.58□□□□□ -1.52
CDHR3-201ENST00000317716 C3orf22Q8N5N4 141 aa5.58□□□□□ -1.52
CDHR3-201ENST00000317716 C10orf105Q8TEF2 133 aa5.58□□□□□ -1.52
CDHR3-201ENST00000317716 ODF3Q96PU9 254 aa5.58□□□□□ -1.52
CDHR3-201ENST00000317716 TRBV30A0A0K0K1B3 111 aa5.58□□□□□ -1.52
CDHR3-201ENST00000317716 SLURP1P55000 103 aa5.58□□□□□ -1.52
CDHR3-201ENST00000317716 HIVEP1P15822 2718 aa5.57□□□□□ -1.52
CDHR3-201ENST00000317716 RBM3P98179 157 aaKnown RBP5.57□□□□□ -1.52
CDHR3-201ENST00000317716 TMEM61Q8N0U2 210 aa5.57□□□□□ -1.52
CDHR3-201ENST00000317716 ATOX1O00244 68 aa5.57□□□□□ -1.52
CDHR3-201ENST00000317716 UQCRQO14949 82 aa5.57□□□□□ -1.52
CDHR3-201ENST00000317716 MSMBP08118 114 aa5.57□□□□□ -1.52
CDHR3-201ENST00000317716 TMEM243Q9BU79 118 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms