RNA–Protein interactions for RNA: ENST00000317118.12

PDE4D-202, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 2,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-202ENST00000317118 HIST1H2BCP62807 126 aa4.13□□□□□ -1.75
PDE4D-202ENST00000317118 RPL36AP83881 106 aaKnown RBP4.13□□□□□ -1.75
PDE4D-202ENST00000317118 HIST2H2BEQ16778 126 aa4.13□□□□□ -1.75
PDE4D-202ENST00000317118 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.13□□□□□ -1.75
PDE4D-202ENST00000317118 FAM19A5Q7Z5A7 132 aaPredicted RBP4.13□□□□□ -1.75
PDE4D-202ENST00000317118 C18orf32Q8TCD1 76 aa4.13□□□□□ -1.75
PDE4D-202ENST00000317118 HIST1H2BHQ93079 126 aa4.13□□□□□ -1.75
PDE4D-202ENST00000317118 RPL36ALQ969Q0 106 aaKnown RBP4.13□□□□□ -1.75
PDE4D-202ENST00000317118 RPL39LQ96EH5 51 aaKnown RBP4.13□□□□□ -1.75
PDE4D-202ENST00000317118 HIST1H2BNQ99877 126 aa4.13□□□□□ -1.75
PDE4D-202ENST00000317118 HIST1H2BMQ99879 126 aa4.13□□□□□ -1.75
PDE4D-202ENST00000317118 DEFB131BA0A096LNP1 70 aa4.12□□□□□ -1.75
PDE4D-202ENST00000317118 UBE2D3P61077 147 aa4.12□□□□□ -1.75
PDE4D-202ENST00000317118 UBE2D2P62837 147 aa4.12□□□□□ -1.75
PDE4D-202ENST00000317118 COL7A1Q02388 2944 aa4.12□□□□□ -1.75
PDE4D-202ENST00000317118 COA6Q5JTJ3 125 aaKnown RBP4.12□□□□□ -1.75
PDE4D-202ENST00000317118 SH2D6Q7Z4S9 175 aa4.12□□□□□ -1.75
PDE4D-202ENST00000317118 VSIG2Q96IQ7 327 aa4.12□□□□□ -1.75
PDE4D-202ENST00000317118 NXT2Q9NPJ8 142 aaKnown RBP4.12□□□□□ -1.75
PDE4D-202ENST00000317118 COX11Q9Y6N1 276 aa4.12□□□□□ -1.75
PDE4D-202ENST00000317118 IGLV2-18A0A075B6J9 118 aa4.12□□□□□ -1.75
PDE4D-202ENST00000317118 VCYO14598 125 aa4.12□□□□□ -1.75
PDE4D-202ENST00000317118 DAZ4Q86SG3 579 aaKnown RBP4.12□□□□□ -1.75
PDE4D-202ENST00000317118 Q8N8P6 123 aa4.12□□□□□ -1.75
PDE4D-202ENST00000317118 TMEM70Q9BUB7 260 aa4.12□□□□□ -1.75
PDE4D-202ENST00000317118 SMIM2Q9BVW6 85 aa4.12□□□□□ -1.75
PDE4D-202ENST00000317118 DAZ3Q9NR90 486 aaKnown RBP4.12□□□□□ -1.75
PDE4D-202ENST00000317118 SDHAF1A6NFY7 115 aa4.11□□□□□ -1.75
PDE4D-202ENST00000317118 I3L3M4 83 aa4.11□□□□□ -1.75
PDE4D-202ENST00000317118 P0DMU3 169 aa4.11□□□□□ -1.75
PDE4D-202ENST00000317118 FAM231AP0DMU4 169 aa4.11□□□□□ -1.75
PDE4D-202ENST00000317118 FAM231CP0DMU5 169 aa4.11□□□□□ -1.75
PDE4D-202ENST00000317118 JOSD1Q15040 202 aaPredicted RBP4.11□□□□□ -1.75
PDE4D-202ENST00000317118 C1orf195Q5TG92 126 aa4.11□□□□□ -1.75
PDE4D-202ENST00000317118 CHCHD1Q96BP2 118 aaKnown RBP4.11□□□□□ -1.75
PDE4D-202ENST00000317118 FBN3Q75N90 2809 aa4.11□□□□□ -1.75
PDE4D-202ENST00000317118 TENM3Q9P273 2699 aa4.11□□□□□ -1.75
PDE4D-202ENST00000317118 NACAE9PAV3 2078 aa4.11□□□□□ -1.75
PDE4D-202ENST00000317118 GYPEP15421 78 aa4.11□□□□□ -1.75
PDE4D-202ENST00000317118 RPL13AP40429 203 aaKnown RBP4.11□□□□□ -1.75
PDE4D-202ENST00000317118 C15orf53Q8NAA6 179 aa4.11□□□□□ -1.75
PDE4D-202ENST00000317118 ZNRF2Q8NHG8 242 aa4.11□□□□□ -1.75
PDE4D-202ENST00000317118 PHLDA1Q8WV24 401 aaPredicted RBP4.11□□□□□ -1.75
PDE4D-202ENST00000317118 Q9UF83 564 aa4.11□□□□□ -1.75
PDE4D-202ENST00000317118 ICOSQ9Y6W8 199 aa4.11□□□□□ -1.75
PDE4D-202ENST00000317118 HTN3P15516 51 aa4.1□□□□□ -1.75
PDE4D-202ENST00000317118 PRSS3P2Q8NHM4 247 aa4.1□□□□□ -1.75
PDE4D-202ENST00000317118 LOC100131303A0A0U1RQF7 123 aa4.1□□□□□ -1.75
PDE4D-202ENST00000317118 GAGE12JA6NER3 117 aa4.1□□□□□ -1.75
PDE4D-202ENST00000317118 LINC01549A6NIU2 74 aa4.1□□□□□ -1.75
PDE4D-202ENST00000317118 ATP5LO75964 103 aa4.1□□□□□ -1.75
PDE4D-202ENST00000317118 NUDT3O95989 172 aa4.1□□□□□ -1.75
PDE4D-202ENST00000317118 IFI27P40305 119 aaPredicted RBP4.1□□□□□ -1.75
PDE4D-202ENST00000317118 GAGE4Q13068 117 aa4.1□□□□□ -1.75
PDE4D-202ENST00000317118 GAGE13Q4V321 117 aa4.1□□□□□ -1.75
PDE4D-202ENST00000317118 ORMDL2Q53FV1 153 aa4.1□□□□□ -1.75
PDE4D-202ENST00000317118 BAGE3Q86Y29 109 aa4.1□□□□□ -1.75
PDE4D-202ENST00000317118 PRR26Q8N8Z3 221 aa4.1□□□□□ -1.75
PDE4D-202ENST00000317118 URB1-AS1Q96HZ7 61 aa4.1□□□□□ -1.75
PDE4D-202ENST00000317118 KIR2DL4Q99706 377 aa4.1□□□□□ -1.75
PDE4D-202ENST00000317118 A0A096LPF7 62 aa4.09□□□□□ -1.75
PDE4D-202ENST00000317118 LOC389332A0A1B0GUA5 103 aa4.09□□□□□ -1.75
PDE4D-202ENST00000317118 NUPR2A6NF83 97 aa4.09□□□□□ -1.75
PDE4D-202ENST00000317118 IQCJQ1A5X6 159 aa4.09□□□□□ -1.75
PDE4D-202ENST00000317118 CEMP1Q6PRD7 247 aaPredicted RBP4.09□□□□□ -1.75
PDE4D-202ENST00000317118 ATP6V0E2Q8NHE4 81 aa4.09□□□□□ -1.75
PDE4D-202ENST00000317118 A0A0A0MQY5 61 aa4.09□□□□□ -1.75
PDE4D-202ENST00000317118 A0A0J9YY99 117 aa4.09□□□□□ -1.75
PDE4D-202ENST00000317118 TSHBP01222 138 aa4.09□□□□□ -1.75
PDE4D-202ENST00000317118 LAGE3Q14657 143 aa4.09□□□□□ -1.75
PDE4D-202ENST00000317118 NEGR1Q7Z3B1 354 aa4.09□□□□□ -1.75
PDE4D-202ENST00000317118 ANAPC13Q9BS18 74 aa4.09□□□□□ -1.75
PDE4D-202ENST00000317118 SPANXA1Q9NS26 97 aa4.09□□□□□ -1.75
PDE4D-202ENST00000317118 H7C423 109 aa4.08□□□□□ -1.76
PDE4D-202ENST00000317118 GHRHP01286 108 aa4.08□□□□□ -1.76
PDE4D-202ENST00000317118 LINC00310P59036 64 aa4.08□□□□□ -1.76
PDE4D-202ENST00000317118 TMEM101Q96IK0 257 aa4.08□□□□□ -1.76
PDE4D-202ENST00000317118 WWC2-AS2Q96NR7 200 aa4.08□□□□□ -1.76
PDE4D-202ENST00000317118 TMEM126AQ9H061 195 aa4.08□□□□□ -1.76
PDE4D-202ENST00000317118 KLK5Q9Y337 293 aaPredicted RBP4.08□□□□□ -1.76
PDE4D-202ENST00000317118 SERF1AO75920 110 aa4.08□□□□□ -1.76
PDE4D-202ENST00000317118 FCER1GP30273 86 aa4.08□□□□□ -1.76
PDE4D-202ENST00000317118 NDUFA6P56556 154 aa4.08□□□□□ -1.76
PDE4D-202ENST00000317118 CD164Q04900 197 aa4.08□□□□□ -1.76
PDE4D-202ENST00000317118 HIST3H2BBQ8N257 126 aa4.08□□□□□ -1.76
PDE4D-202ENST00000317118 PLECQ15149 4684 aaKnown RBP4.08□□□□□ -1.76
PDE4D-202ENST00000317118 TRBV6-8A0A0A6YYG3 113 aa4.08□□□□□ -1.76
PDE4D-202ENST00000317118 IGHV1-24A0A0C4DH33 117 aa4.08□□□□□ -1.76
PDE4D-202ENST00000317118 FAM236DA0A1B0GTK5 79 aa4.08□□□□□ -1.76
PDE4D-202ENST00000317118 FAM236CP0DP71 79 aa4.08□□□□□ -1.76
PDE4D-202ENST00000317118 HSD52Q0P140 79 aa4.08□□□□□ -1.76
PDE4D-202ENST00000317118 ZFAND6Q6FIF0 208 aa4.08□□□□□ -1.76
PDE4D-202ENST00000317118 LYPD5Q6UWN5 251 aa4.08□□□□□ -1.76
PDE4D-202ENST00000317118 NTM-AS1Q6ZSK4 140 aa4.08□□□□□ -1.76
PDE4D-202ENST00000317118 STPG4Q8N801 248 aa4.08□□□□□ -1.76
PDE4D-202ENST00000317118 TMEM18Q96B42 140 aa4.08□□□□□ -1.76
PDE4D-202ENST00000317118 TRBV25-1A0A075B6N4 114 aa4.07□□□□□ -1.76
PDE4D-202ENST00000317118 LOC107984640A0A0U1RRK4 108 aa4.07□□□□□ -1.76
PDE4D-202ENST00000317118 GAGE12HA6NDE8 117 aa4.07□□□□□ -1.76
PDE4D-202ENST00000317118 IGLL5B9A064 214 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms