RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 NSUN5P1Q3KNT7 163 aa9.4□□□□□ -0.9
RETREG3-201ENST00000309428 CRPP02741 224 aa9.4□□□□□ -0.9
RETREG3-201ENST00000309428 BAALC-AS2P0C853 105 aa9.4□□□□□ -0.91
RETREG3-201ENST00000309428 C20orf203Q8NBC4 194 aa9.4□□□□□ -0.91
RETREG3-201ENST00000309428 NXPH4O95158 308 aa9.39□□□□□ -0.91
RETREG3-201ENST00000309428 TIMM17AQ99595 171 aa9.39□□□□□ -0.91
RETREG3-201ENST00000309428 LENEPQ9Y5L5 61 aa9.39□□□□□ -0.91
RETREG3-201ENST00000309428 LGALS9O00182 355 aa9.39□□□□□ -0.91
RETREG3-201ENST00000309428 NBEAL1Q6ZS30 2694 aa9.39□□□□□ -0.91
RETREG3-201ENST00000309428 MRPL53Q96EL3 112 aaKnown RBP9.39□□□□□ -0.91
RETREG3-201ENST00000309428 FHL3Q13643 280 aa9.38□□□□□ -0.91
RETREG3-201ENST00000309428 WFDC11Q8NEX6 87 aa9.38□□□□□ -0.91
RETREG3-201ENST00000309428 Q9UF83 564 aa9.38□□□□□ -0.91
RETREG3-201ENST00000309428 ELANEP08246 267 aa9.38□□□□□ -0.91
RETREG3-201ENST00000309428 TMEM61Q8N0U2 210 aa9.38□□□□□ -0.91
RETREG3-201ENST00000309428 CDKN2A-AS1Q9UH64 79 aa9.37□□□□□ -0.91
RETREG3-201ENST00000309428 UNC79Q9P2D8 2635 aa9.37□□□□□ -0.91
RETREG3-201ENST00000309428 IGLV4-69A0A075B6H9 119 aa9.37□□□□□ -0.91
RETREG3-201ENST00000309428 CRYGDP07320 174 aa9.37□□□□□ -0.91
RETREG3-201ENST00000309428 IGLV4-3A0A075B6K6 122 aa9.36□□□□□ -0.91
RETREG3-201ENST00000309428 CLPSL2Q6UWE3 100 aa9.36□□□□□ -0.91
RETREG3-201ENST00000309428 WFDC10AQ9H1F0 79 aa9.36□□□□□ -0.91
RETREG3-201ENST00000309428 UBE2D3P61077 147 aa9.36□□□□□ -0.91
RETREG3-201ENST00000309428 UBE2D2P62837 147 aa9.36□□□□□ -0.91
RETREG3-201ENST00000309428 MAST4O15021 2626 aa9.35□□□□□ -0.91
RETREG3-201ENST00000309428 RPL32P62910 135 aaKnown RBP9.35□□□□□ -0.91
RETREG3-201ENST00000309428 STHQ8IWL8 128 aa9.35□□□□□ -0.91
RETREG3-201ENST00000309428 IGIPA6NJ69 53 aa9.35□□□□□ -0.91
RETREG3-201ENST00000309428 TSHBP01222 138 aa9.35□□□□□ -0.91
RETREG3-201ENST00000309428 ZNF415Q09FC8 603 aa9.35□□□□□ -0.91
RETREG3-201ENST00000309428 ATP5G1P05496 136 aa9.35□□□□□ -0.91
RETREG3-201ENST00000309428 RHOHQ15669 191 aa9.35□□□□□ -0.91
RETREG3-201ENST00000309428 F8P00451 2351 aa9.34□□□□□ -0.91
RETREG3-201ENST00000309428 TRGV4A0A0C4DH28 118 aa9.34□□□□□ -0.91
RETREG3-201ENST00000309428 TMEM223A0PJW6 202 aa9.34□□□□□ -0.91
RETREG3-201ENST00000309428 RPL36AP83881 106 aaKnown RBP9.34□□□□□ -0.91
RETREG3-201ENST00000309428 ZNF575Q86XF7 245 aa9.34□□□□□ -0.91
RETREG3-201ENST00000309428 RPL36ALQ969Q0 106 aaKnown RBP9.34□□□□□ -0.91
RETREG3-201ENST00000309428 VPREB3Q9UKI3 123 aa9.34□□□□□ -0.91
RETREG3-201ENST00000309428 POLR2KP53803 58 aaKnown RBP9.34□□□□□ -0.91
RETREG3-201ENST00000309428 NOTCH1P46531 2555 aa9.34□□□□□ -0.91
RETREG3-201ENST00000309428 A0A096LPF7 62 aa9.34□□□□□ -0.92
RETREG3-201ENST00000309428 PIK3CD-AS1Q5SR53 167 aa9.34□□□□□ -0.92
RETREG3-201ENST00000309428 M0QY20 66 aa9.33□□□□□ -0.92
RETREG3-201ENST00000309428 SHISA2Q6UWI4 295 aa9.33□□□□□ -0.92
RETREG3-201ENST00000309428 C5orf38Q86SI9 138 aa9.33□□□□□ -0.92
RETREG3-201ENST00000309428 ADAMTSL4-AS1Q5T5F5 129 aa9.33□□□□□ -0.92
RETREG3-201ENST00000309428 COPS9Q8WXC6 57 aa9.33□□□□□ -0.92
RETREG3-201ENST00000309428 U3KQE9 123 aa9.33□□□□□ -0.92
RETREG3-201ENST00000309428 IGHV1-58A0A0C4DH39 117 aa9.32□□□□□ -0.92
RETREG3-201ENST00000309428 NDUFA7O95182 113 aa9.32□□□□□ -0.92
RETREG3-201ENST00000309428 C6orf226Q5I0X4 101 aa9.32□□□□□ -0.92
RETREG3-201ENST00000309428 SVIPQ8NHG7 77 aa9.32□□□□□ -0.92
RETREG3-201ENST00000309428 TMEM263Q8WUH6 116 aaKnown RBP9.32□□□□□ -0.92
RETREG3-201ENST00000309428 SMR3AQ99954 134 aa9.32□□□□□ -0.92
RETREG3-201ENST00000309428 DEFB130BP0DP73 79 aa9.32□□□□□ -0.92
RETREG3-201ENST00000309428 DEFB130AP0DP74 79 aa9.32□□□□□ -0.92
RETREG3-201ENST00000309428 H7C423 109 aa9.31□□□□□ -0.92
RETREG3-201ENST00000309428 SDIM1Q6ZPB5 146 aa9.31□□□□□ -0.92
RETREG3-201ENST00000309428 POM121L12Q8N7R1 296 aa9.31□□□□□ -0.92
RETREG3-201ENST00000309428 KLK5Q9Y337 293 aaPredicted RBP9.31□□□□□ -0.92
RETREG3-201ENST00000309428 PLA2G2AP14555 144 aa9.31□□□□□ -0.92
RETREG3-201ENST00000309428 DAZ2Q13117 558 aaKnown RBP9.31□□□□□ -0.92
RETREG3-201ENST00000309428 DAZ4Q86SG3 579 aaKnown RBP9.31□□□□□ -0.92
RETREG3-201ENST00000309428 DCANP1Q8TF63 244 aa9.31□□□□□ -0.92
RETREG3-201ENST00000309428 LINC00467Q9BRT7 94 aa9.31□□□□□ -0.92
RETREG3-201ENST00000309428 DAZ3Q9NR90 486 aaKnown RBP9.31□□□□□ -0.92
RETREG3-201ENST00000309428 A0A0B4J2C4 111 aa9.3□□□□□ -0.92
RETREG3-201ENST00000309428 HTN3P15516 51 aa9.3□□□□□ -0.92
RETREG3-201ENST00000309428 ESM1Q9NQ30 184 aa9.3□□□□□ -0.92
RETREG3-201ENST00000309428 A0A0J9YX75 114 aa9.3□□□□□ -0.92
RETREG3-201ENST00000309428 C14orf132Q9NPU4 83 aa9.3□□□□□ -0.92
RETREG3-201ENST00000309428 PSMB8P28062 276 aa9.3□□□□□ -0.92
RETREG3-201ENST00000309428 PSMG3-AS1Q96PY0 264 aa9.3□□□□□ -0.92
RETREG3-201ENST00000309428 A0A1B0GX51 115 aa9.29□□□□□ -0.92
RETREG3-201ENST00000309428 MGAM2Q2M2H8 2515 aa9.29□□□□□ -0.92
RETREG3-201ENST00000309428 MIAQ16674 131 aa9.29□□□□□ -0.92
RETREG3-201ENST00000309428 IGHV4-4A0A075B6R2 117 aa9.29□□□□□ -0.92
RETREG3-201ENST00000309428 TRBV27A0A0K0K1C4 114 aa9.29□□□□□ -0.92
RETREG3-201ENST00000309428 H3BT86 120 aa9.29□□□□□ -0.92
RETREG3-201ENST00000309428 SLPIP03973 132 aa9.29□□□□□ -0.92
RETREG3-201ENST00000309428 IGHV4-31P0DP07 118 aa9.28□□□□□ -0.92
RETREG3-201ENST00000309428 RBMY1BA6NDE4 496 aaKnown RBP9.28□□□□□ -0.92
RETREG3-201ENST00000309428 RBMY1EA6NEQ0 496 aaKnown RBP9.28□□□□□ -0.92
RETREG3-201ENST00000309428 RBMY1DP0C7P1 496 aaKnown RBP9.28□□□□□ -0.92
RETREG3-201ENST00000309428 RBMY1A1P0DJD3 496 aaKnown RBP9.28□□□□□ -0.92
RETREG3-201ENST00000309428 RBMY1CP0DJD4 496 aa9.28□□□□□ -0.92
RETREG3-201ENST00000309428 VSIG2Q96IQ7 327 aa9.28□□□□□ -0.92
RETREG3-201ENST00000309428 DEFB4AO15263 64 aa9.27□□□□□ -0.92
RETREG3-201ENST00000309428 COX8CQ7Z4L0 72 aa9.27□□□□□ -0.92
RETREG3-201ENST00000309428 ZNF843Q8N446 348 aa9.27□□□□□ -0.92
RETREG3-201ENST00000309428 IGLV1-40P01703 118 aa9.27□□□□□ -0.93
RETREG3-201ENST00000309428 hADV29S1A0JD25 119 aa9.27□□□□□ -0.93
RETREG3-201ENST00000309428 SOCS3O14543 225 aa9.27□□□□□ -0.93
RETREG3-201ENST00000309428 LECT2O14960 151 aa9.27□□□□□ -0.93
RETREG3-201ENST00000309428 LINC01619G3V211 115 aa9.26□□□□□ -0.93
RETREG3-201ENST00000309428 INSP01308 110 aa9.26□□□□□ -0.93
RETREG3-201ENST00000309428 INAFM2P0DMQ5 153 aa9.26□□□□□ -0.93
RETREG3-201ENST00000309428 DEFB113Q30KQ7 82 aa9.26□□□□□ -0.93
RETREG3-201ENST00000309428 HIVEP1P15822 2718 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms