RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 C18orf32Q8TCD1 76 aa12.01□□□□□ -0.49
SSSCA1-201ENST00000309328 UBE2D4Q9Y2X8 147 aa12.01□□□□□ -0.49
SSSCA1-201ENST00000309328 PYGO1Q9Y3Y4 419 aa12.01□□□□□ -0.49
SSSCA1-201ENST00000309328 ENHOQ6UWT2 76 aa12□□□□□ -0.49
SSSCA1-201ENST00000309328 AP5S1Q9NUS5 200 aa12□□□□□ -0.49
SSSCA1-201ENST00000309328 CCL25O15444 150 aa11.99□□□□□ -0.49
SSSCA1-201ENST00000309328 TRGC2P03986 189 aa11.99□□□□□ -0.49
SSSCA1-201ENST00000309328 MRPS36P82909 103 aaKnown RBP11.99□□□□□ -0.49
SSSCA1-201ENST00000309328 ZNF664Q8N3J9 261 aa11.99□□□□□ -0.49
SSSCA1-201ENST00000309328 CDC42SE2Q9NRR3 84 aa11.99□□□□□ -0.49
SSSCA1-201ENST00000309328 DNAH10Q8IVF4 4471 aa11.98□□□□□ -0.49
SSSCA1-201ENST00000309328 IGKV2D-24A0A075B6R9 120 aa11.98□□□□□ -0.49
SSSCA1-201ENST00000309328 PRSS29PA6NIE9 313 aa11.98□□□□□ -0.49
SSSCA1-201ENST00000309328 EREGO14944 169 aa11.98□□□□□ -0.49
SSSCA1-201ENST00000309328 SCO1O75880 301 aa11.98□□□□□ -0.49
SSSCA1-201ENST00000309328 PAPPA-AS1Q5QFB9 102 aa11.98□□□□□ -0.49
SSSCA1-201ENST00000309328 C2orf66Q6UXQ4 117 aa11.98□□□□□ -0.49
SSSCA1-201ENST00000309328 FRAS1Q86XX4 4008 aa11.97□□□□□ -0.49
SSSCA1-201ENST00000309328 LINC00614P0C842 121 aa11.97□□□□□ -0.49
SSSCA1-201ENST00000309328 RPL39P62891 51 aaKnown RBP11.97□□□□□ -0.49
SSSCA1-201ENST00000309328 CLPSL2Q6UWE3 100 aa11.95□□□□□ -0.5
SSSCA1-201ENST00000309328 Q6ZN92 141 aa11.95□□□□□ -0.5
SSSCA1-201ENST00000309328 TOMM6Q96B49 74 aa11.95□□□□□ -0.5
SSSCA1-201ENST00000309328 CHCHD1Q96BP2 118 aaKnown RBP11.95□□□□□ -0.5
SSSCA1-201ENST00000309328 SS18Q15532 418 aa11.94□□□□□ -0.5
SSSCA1-201ENST00000309328 TIMM17AQ99595 171 aa11.94□□□□□ -0.5
SSSCA1-201ENST00000309328 DNAH17Q9UFH2 4485 aa11.94□□□□□ -0.5
SSSCA1-201ENST00000309328 TMEM141Q96I45 108 aa11.93□□□□□ -0.5
SSSCA1-201ENST00000309328 C1orf196B1AJZ1 125 aa11.92□□□□□ -0.5
SSSCA1-201ENST00000309328 TNP2Q05952 138 aa11.92□□□□□ -0.5
SSSCA1-201ENST00000309328 Q6ZUT4 128 aa11.92□□□□□ -0.5
SSSCA1-201ENST00000309328 ERASQ7Z444 233 aa11.92□□□□□ -0.5
SSSCA1-201ENST00000309328 BAGE3Q86Y29 109 aa11.92□□□□□ -0.5
SSSCA1-201ENST00000309328 C2orf88Q9BSF0 95 aa11.92□□□□□ -0.5
SSSCA1-201ENST00000309328 LINC00959A0A1B0GUT2 108 aa11.91□□□□□ -0.5
SSSCA1-201ENST00000309328 IGIPA6NJ69 53 aa11.91□□□□□ -0.5
SSSCA1-201ENST00000309328 HBDP02042 147 aa11.91□□□□□ -0.5
SSSCA1-201ENST00000309328 C14orf177Q52M58 125 aa11.91□□□□□ -0.5
SSSCA1-201ENST00000309328 FAT2Q9NYQ8 4349 aa11.9□□□□□ -0.5
SSSCA1-201ENST00000309328 IGLV4-3A0A075B6K6 122 aa11.9□□□□□ -0.5
SSSCA1-201ENST00000309328 IGKV3OR2-268A0A0C4DH90 116 aa11.9□□□□□ -0.5
SSSCA1-201ENST00000309328 TEX43Q6ZNM6 134 aa11.9□□□□□ -0.5
SSSCA1-201ENST00000309328 SCGB3A1Q96QR1 104 aa11.9□□□□□ -0.5
SSSCA1-201ENST00000309328 A0A087WTM6 91 aa11.89□□□□□ -0.51
SSSCA1-201ENST00000309328 CHCHD10Q8WYQ3 142 aaPredicted RBP11.89□□□□□ -0.51
SSSCA1-201ENST00000309328 VCX2Q9H322 139 aa11.89□□□□□ -0.51
SSSCA1-201ENST00000309328 IGLV10-54A0A075B6I4 117 aa11.88□□□□□ -0.51
SSSCA1-201ENST00000309328 IFITM10A6NMD0 228 aa11.88□□□□□ -0.51
SSSCA1-201ENST00000309328 CFAP161Q6P656 301 aa11.88□□□□□ -0.51
SSSCA1-201ENST00000309328 CD164L2Q6UWJ8 174 aa11.88□□□□□ -0.51
SSSCA1-201ENST00000309328 LRCOL1A6NCL2 159 aa11.87□□□□□ -0.51
SSSCA1-201ENST00000309328 HSBP1O75506 76 aa11.87□□□□□ -0.51
SSSCA1-201ENST00000309328 KRTAP26-1Q6PEX3 210 aa11.87□□□□□ -0.51
SSSCA1-201ENST00000309328 URB1-AS1Q96HZ7 61 aa11.87□□□□□ -0.51
SSSCA1-201ENST00000309328 TRAV13-1A0A0B4J241 112 aa11.86□□□□□ -0.51
SSSCA1-201ENST00000309328 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.86□□□□□ -0.51
SSSCA1-201ENST00000309328 ATP5LO75964 103 aa11.86□□□□□ -0.51
SSSCA1-201ENST00000309328 SEC11AP67812 179 aa11.86□□□□□ -0.51
SSSCA1-201ENST00000309328 CDPF1Q6NVV7 123 aa11.86□□□□□ -0.51
SSSCA1-201ENST00000309328 NTN5Q8WTR8 489 aaPredicted RBP11.86□□□□□ -0.51
SSSCA1-201ENST00000309328 FAM104AQ969W3 186 aa11.86□□□□□ -0.51
SSSCA1-201ENST00000309328 AMELXQ99217 191 aa11.86□□□□□ -0.51
SSSCA1-201ENST00000309328 GAGE12HA6NDE8 117 aa11.85□□□□□ -0.51
SSSCA1-201ENST00000309328 XCL1P47992 114 aa11.85□□□□□ -0.51
SSSCA1-201ENST00000309328 RNASE13Q5GAN3 156 aaKnown RBP11.85□□□□□ -0.51
SSSCA1-201ENST00000309328 PGPEP1Q9NXJ5 209 aa11.85□□□□□ -0.51
SSSCA1-201ENST00000309328 A0A1B0GVY2 172 aa11.84□□□□□ -0.51
SSSCA1-201ENST00000309328 Q8N814 137 aa11.84□□□□□ -0.51
SSSCA1-201ENST00000309328 MAPKAPK5-AS1Q8N8E1 139 aa11.84□□□□□ -0.51
SSSCA1-201ENST00000309328 BAALCQ8WXS3 180 aa11.84□□□□□ -0.51
SSSCA1-201ENST00000309328 OPRPNQ99935 248 aaPredicted RBP11.84□□□□□ -0.51
SSSCA1-201ENST00000309328 HIST1H2BKO60814 126 aa11.83□□□□□ -0.52
SSSCA1-201ENST00000309328 HIST1H2BJP06899 126 aa11.83□□□□□ -0.52
SSSCA1-201ENST00000309328 HIST1H2BOP23527 126 aa11.83□□□□□ -0.52
SSSCA1-201ENST00000309328 HIST1H2BBP33778 126 aa11.83□□□□□ -0.52
SSSCA1-201ENST00000309328 HIST1H2BDP58876 126 aa11.83□□□□□ -0.52
SSSCA1-201ENST00000309328 HIST1H2BCP62807 126 aa11.83□□□□□ -0.52
SSSCA1-201ENST00000309328 FOXI1Q12951 378 aa11.83□□□□□ -0.52
SSSCA1-201ENST00000309328 HIST2H2BEQ16778 126 aa11.83□□□□□ -0.52
SSSCA1-201ENST00000309328 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.83□□□□□ -0.52
SSSCA1-201ENST00000309328 HIST1H2BHQ93079 126 aa11.83□□□□□ -0.52
SSSCA1-201ENST00000309328 HIST1H2BNQ99877 126 aa11.83□□□□□ -0.52
SSSCA1-201ENST00000309328 HIST1H2BMQ99879 126 aa11.83□□□□□ -0.52
SSSCA1-201ENST00000309328 HECTD4Q9Y4D8 3996 aa11.83□□□□□ -0.52
SSSCA1-201ENST00000309328 A0A096LNJ9 63 aa11.82□□□□□ -0.52
SSSCA1-201ENST00000309328 SERF1AO75920 110 aa11.82□□□□□ -0.52
SSSCA1-201ENST00000309328 PDZD11Q5EBL8 140 aa11.82□□□□□ -0.52
SSSCA1-201ENST00000309328 USP17L23D6RBM5 183 aa11.81□□□□□ -0.52
SSSCA1-201ENST00000309328 COX7A2LO14548 114 aa11.81□□□□□ -0.52
SSSCA1-201ENST00000309328 UBE2D1P51668 147 aa11.81□□□□□ -0.52
SSSCA1-201ENST00000309328 PMVKQ15126 192 aa11.81□□□□□ -0.52
SSSCA1-201ENST00000309328 FAM19A3Q7Z5A8 133 aa11.81□□□□□ -0.52
SSSCA1-201ENST00000309328 APOMO95445 188 aa11.8□□□□□ -0.52
SSSCA1-201ENST00000309328 LINC00173Q6ZV60 143 aa11.8□□□□□ -0.52
SSSCA1-201ENST00000309328 IGHV1-58A0A0C4DH39 117 aa11.79□□□□□ -0.52
SSSCA1-201ENST00000309328 MALP21145 153 aa11.79□□□□□ -0.52
SSSCA1-201ENST00000309328 HERVK_113P63121 156 aa11.79□□□□□ -0.52
SSSCA1-201ENST00000309328 PMCHL1Q16048 86 aa11.79□□□□□ -0.52
SSSCA1-201ENST00000309328 SPATA12Q7Z6I5 190 aa11.79□□□□□ -0.52
SSSCA1-201ENST00000309328 IGHV3OR16-9A0A0B4J2B5 98 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms