RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 DEFB136Q30KP8 78 aa3.57□□□□□ -1.84
CKS1B-201ENST00000308987 PRR9Q5T870 116 aa3.57□□□□□ -1.84
CKS1B-201ENST00000308987 GPHB5Q86YW7 130 aa3.57□□□□□ -1.84
CKS1B-201ENST00000308987 SBSPONQ8IVN8 264 aa3.57□□□□□ -1.84
CKS1B-201ENST00000308987 RNF152Q8N8N0 203 aa3.57□□□□□ -1.84
CKS1B-201ENST00000308987 MUC7Q8TAX7 377 aa3.57□□□□□ -1.84
CKS1B-201ENST00000308987 BAALCQ8WXS3 180 aa3.57□□□□□ -1.84
CKS1B-201ENST00000308987 NAA38Q9BRA0 125 aaKnown RBP3.57□□□□□ -1.84
CKS1B-201ENST00000308987 TTTY13Q9BZ97 58 aa3.57□□□□□ -1.84
CKS1B-201ENST00000308987 PRO0461Q9UI25 63 aa3.57□□□□□ -1.84
CKS1B-201ENST00000308987 KIF25-AS1Q9Y6Z4 181 aa3.57□□□□□ -1.84
CKS1B-201ENST00000308987 IGHV3OR16-8A0A075B7F1 116 aa3.56□□□□□ -1.84
CKS1B-201ENST00000308987 TRAV26-2A0A0B4J265 109 aa3.56□□□□□ -1.84
CKS1B-201ENST00000308987 TRBV27A0A0K0K1C4 114 aa3.56□□□□□ -1.84
CKS1B-201ENST00000308987 IGIPA6NJ69 53 aa3.56□□□□□ -1.84
CKS1B-201ENST00000308987 C11orf86A6NJI1 115 aa3.56□□□□□ -1.84
CKS1B-201ENST00000308987 K7ERJ3 54 aa3.56□□□□□ -1.84
CKS1B-201ENST00000308987 LGALS9O00182 355 aa3.56□□□□□ -1.84
CKS1B-201ENST00000308987 PRB4P10163 310 aaPredicted RBP3.56□□□□□ -1.84
CKS1B-201ENST00000308987 RNASE3P12724 160 aaKnown RBP3.56□□□□□ -1.84
CKS1B-201ENST00000308987 CRYBA4P53673 196 aa3.56□□□□□ -1.84
CKS1B-201ENST00000308987 LINC00315P59091 139 aa3.56□□□□□ -1.84
CKS1B-201ENST00000308987 UBE2D3P61077 147 aa3.56□□□□□ -1.84
CKS1B-201ENST00000308987 UBE2D2P62837 147 aa3.56□□□□□ -1.84
CKS1B-201ENST00000308987 WFDC2Q14508 124 aa3.56□□□□□ -1.84
CKS1B-201ENST00000308987 PMVKQ15126 192 aa3.56□□□□□ -1.84
CKS1B-201ENST00000308987 RHOHQ15669 191 aa3.56□□□□□ -1.84
CKS1B-201ENST00000308987 ANXA2RQ3ZCQ2 193 aa3.56□□□□□ -1.84
CKS1B-201ENST00000308987 MORN3Q6PF18 240 aaPredicted RBP3.56□□□□□ -1.84
CKS1B-201ENST00000308987 MTURNQ8N3F0 131 aa3.56□□□□□ -1.84
CKS1B-201ENST00000308987 KLHL30-AS1Q8NEE0 82 aa3.56□□□□□ -1.84
CKS1B-201ENST00000308987 DLX4Q92988 240 aaPredicted RBP3.56□□□□□ -1.84
CKS1B-201ENST00000308987 KIR2DL4Q99706 377 aa3.56□□□□□ -1.84
CKS1B-201ENST00000308987 PRADC1Q9BSG0 188 aa3.56□□□□□ -1.84
CKS1B-201ENST00000308987 PCLOQ9Y6V0 5065 aa3.55□□□□□ -1.84
CKS1B-201ENST00000308987 IGHV3-66A0A0C4DH42 116 aa3.55□□□□□ -1.84
CKS1B-201ENST00000308987 ZNF815PA8K554 130 aa3.55□□□□□ -1.84
CKS1B-201ENST00000308987 CCL24O00175 119 aa3.55□□□□□ -1.84
CKS1B-201ENST00000308987 CRYGDP07320 174 aa3.55□□□□□ -1.84
CKS1B-201ENST00000308987 CD7P09564 240 aa3.55□□□□□ -1.84
CKS1B-201ENST00000308987 AZU1P20160 251 aa3.55□□□□□ -1.84
CKS1B-201ENST00000308987 TCTAP57738 103 aa3.55□□□□□ -1.84
CKS1B-201ENST00000308987 SRSF9Q13242 221 aaKnown RBP eCLIP3.55□□□□□ -1.84
CKS1B-201ENST00000308987 CFAP126Q5VTH2 177 aa3.55□□□□□ -1.84
CKS1B-201ENST00000308987 ZFAND6Q6FIF0 208 aa3.55□□□□□ -1.84
CKS1B-201ENST00000308987 FAM159AQ6UWV7 190 aa3.55□□□□□ -1.84
CKS1B-201ENST00000308987 ZFP2Q6ZN57 461 aa3.55□□□□□ -1.84
CKS1B-201ENST00000308987 NFE4Q86UQ8 179 aa3.55□□□□□ -1.84
CKS1B-201ENST00000308987 C14orf178Q8N769 122 aaPredicted RBP3.55□□□□□ -1.84
CKS1B-201ENST00000308987 SLC25A29Q8N8R3 303 aa3.55□□□□□ -1.84
CKS1B-201ENST00000308987 RPL39LQ96EH5 51 aaKnown RBP3.55□□□□□ -1.84
CKS1B-201ENST00000308987 LINC01600Q96MT4 127 aa3.55□□□□□ -1.84
CKS1B-201ENST00000308987 SPAG8Q99932 426 aaPredicted RBP3.55□□□□□ -1.84
CKS1B-201ENST00000308987 C1QTNF4Q9BXJ3 329 aa3.55□□□□□ -1.84
CKS1B-201ENST00000308987 EDA2RQ9HAV5 297 aa3.55□□□□□ -1.84
CKS1B-201ENST00000308987 DAZ1Q9NQZ3 744 aaKnown RBP3.55□□□□□ -1.84
CKS1B-201ENST00000308987 AGRNO00468 2067 aa3.55□□□□□ -1.84
CKS1B-201ENST00000308987 MUC4Q99102 2169 aa3.54□□□□□ -1.84
CKS1B-201ENST00000308987 IGLV4-69A0A075B6H9 119 aa3.54□□□□□ -1.84
CKS1B-201ENST00000308987 IGHV3OR16-13A0A075B7E8 117 aa3.54□□□□□ -1.84
CKS1B-201ENST00000308987 IGHV3-74A0A0B4J1X5 117 aa3.54□□□□□ -1.84
CKS1B-201ENST00000308987 A0A0J9YX75 114 aa3.54□□□□□ -1.84
CKS1B-201ENST00000308987 A0A0J9YY99 117 aa3.54□□□□□ -1.84
CKS1B-201ENST00000308987 A0A1B0GV72 72 aa3.54□□□□□ -1.84
CKS1B-201ENST00000308987 MGPP08493 103 aa3.54□□□□□ -1.84
CKS1B-201ENST00000308987 RNASE4P34096 147 aaKnown RBP3.54□□□□□ -1.84
CKS1B-201ENST00000308987 CFHR3Q02985 330 aa3.54□□□□□ -1.84
CKS1B-201ENST00000308987 ETDBQ3ZM63 59 aa3.54□□□□□ -1.84
CKS1B-201ENST00000308987 ZNF876PQ49A33 203 aa3.54□□□□□ -1.84
CKS1B-201ENST00000308987 PIK3CD-AS1Q5SR53 167 aa3.54□□□□□ -1.84
CKS1B-201ENST00000308987 SCGB1D4Q6XE38 83 aa3.54□□□□□ -1.84
CKS1B-201ENST00000308987 PPDPFLQ8WWR9 84 aa3.54□□□□□ -1.84
CKS1B-201ENST00000308987 PLEKHB2Q96CS7 222 aa3.54□□□□□ -1.84
CKS1B-201ENST00000308987 C9orf85Q96MD7 179 aa3.54□□□□□ -1.84
CKS1B-201ENST00000308987 RHPN1-AS1Q9BWJ2 59 aa3.54□□□□□ -1.84
CKS1B-201ENST00000308987 MRPL16Q9NX20 251 aaKnown RBP3.54□□□□□ -1.84
CKS1B-201ENST00000308987 TP53TG1Q9Y2A0 90 aa3.54□□□□□ -1.84
CKS1B-201ENST00000308987 ZNF256Q9Y2P7 627 aaPredicted RBP3.54□□□□□ -1.84
CKS1B-201ENST00000308987 IGHV3-49A0A0A0MS15 119 aa3.53□□□□□ -1.84
CKS1B-201ENST00000308987 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.53□□□□□ -1.84
CKS1B-201ENST00000308987 IGLV5-39A0A0G2JS06 123 aa3.53□□□□□ -1.84
CKS1B-201ENST00000308987 SDHAF1A6NFY7 115 aa3.53□□□□□ -1.84
CKS1B-201ENST00000308987 TMEM262E9PQX1 116 aa3.53□□□□□ -1.84
CKS1B-201ENST00000308987 LEPROTO15243 131 aa3.53□□□□□ -1.84
CKS1B-201ENST00000308987 GNRH2O43555 120 aa3.53□□□□□ -1.84
CKS1B-201ENST00000308987 DUSP14O95147 198 aaKnown RBP3.53□□□□□ -1.84
CKS1B-201ENST00000308987 APOMO95445 188 aa3.53□□□□□ -1.84
CKS1B-201ENST00000308987 TSPAN13O95857 204 aa3.53□□□□□ -1.84
CKS1B-201ENST00000308987 TSHBP01222 138 aa3.53□□□□□ -1.84
CKS1B-201ENST00000308987 C9orf66Q5T8R8 295 aa3.53□□□□□ -1.84
CKS1B-201ENST00000308987 UNQ9165/PRO28630Q6UXU0 137 aa3.53□□□□□ -1.84
CKS1B-201ENST00000308987 Q6ZQT7 251 aa3.53□□□□□ -1.84
CKS1B-201ENST00000308987 SH2D6Q7Z4S9 175 aa3.53□□□□□ -1.84
CKS1B-201ENST00000308987 TRPT1Q86TN4 253 aaKnown RBP3.53□□□□□ -1.84
CKS1B-201ENST00000308987 TEN1Q86WV5 123 aa3.53□□□□□ -1.84
CKS1B-201ENST00000308987 C10orf126Q8N4M7 172 aa3.53□□□□□ -1.84
CKS1B-201ENST00000308987 DCANP1Q8TF63 244 aa3.53□□□□□ -1.84
CKS1B-201ENST00000308987 PTH2Q96A98 100 aa3.53□□□□□ -1.84
CKS1B-201ENST00000308987 RNF183Q96D59 192 aa3.53□□□□□ -1.84
CKS1B-201ENST00000308987 PRO1854Q9UHT4 67 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms