RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 UBE2D4Q9Y2X8 147 aa7.3□□□□□ -1.24
CSPG4P1Y-201ENST00000306641 TRAPPC1Q9Y5R8 145 aa7.3□□□□□ -1.24
CSPG4P1Y-201ENST00000306641 DNAH10Q8IVF4 4471 aa7.29□□□□□ -1.24
CSPG4P1Y-201ENST00000306641 K7EMI3 77 aa7.29□□□□□ -1.24
CSPG4P1Y-201ENST00000306641 KRTAP10-2P60368 255 aa7.29□□□□□ -1.24
CSPG4P1Y-201ENST00000306641 ZNF664Q8N3J9 261 aa7.29□□□□□ -1.24
CSPG4P1Y-201ENST00000306641 TIMM21Q9BVV7 248 aa7.29□□□□□ -1.24
CSPG4P1Y-201ENST00000306641 SPANXA1Q9NS26 97 aa7.29□□□□□ -1.24
CSPG4P1Y-201ENST00000306641 CSDC2Q9Y534 153 aaKnown RBP7.29□□□□□ -1.24
CSPG4P1Y-201ENST00000306641 DNAH2Q9P225 4427 aa7.28□□□□□ -1.24
CSPG4P1Y-201ENST00000306641 IGLV5-52A0A0A0MRZ9 124 aa7.28□□□□□ -1.24
CSPG4P1Y-201ENST00000306641 IFI27P40305 119 aaPredicted RBP7.28□□□□□ -1.24
CSPG4P1Y-201ENST00000306641 RPL39P62891 51 aaKnown RBP7.28□□□□□ -1.24
CSPG4P1Y-201ENST00000306641 SS18Q15532 418 aa7.28□□□□□ -1.24
CSPG4P1Y-201ENST00000306641 CBLN2Q8IUK8 224 aa7.28□□□□□ -1.24
CSPG4P1Y-201ENST00000306641 PRSS3P2Q8NHM4 247 aa7.28□□□□□ -1.24
CSPG4P1Y-201ENST00000306641 CDC42SE2Q9NRR3 84 aa7.28□□□□□ -1.24
CSPG4P1Y-201ENST00000306641 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.27□□□□□ -1.25
CSPG4P1Y-201ENST00000306641 G0S2P27469 103 aa7.27□□□□□ -1.25
CSPG4P1Y-201ENST00000306641 WFDC2Q14508 124 aa7.27□□□□□ -1.25
CSPG4P1Y-201ENST00000306641 Q6ZUT4 128 aa7.27□□□□□ -1.25
CSPG4P1Y-201ENST00000306641 MAPKAPK5-AS1Q8N8E1 139 aa7.27□□□□□ -1.25
CSPG4P1Y-201ENST00000306641 ALKBH7Q9BT30 221 aaPredicted RBP7.27□□□□□ -1.25
CSPG4P1Y-201ENST00000306641 CYSLTR1Q9Y271 337 aa7.27□□□□□ -1.25
CSPG4P1Y-201ENST00000306641 LINC00959A0A1B0GUT2 108 aa7.26□□□□□ -1.25
CSPG4P1Y-201ENST00000306641 GAGE12HA6NDE8 117 aa7.26□□□□□ -1.25
CSPG4P1Y-201ENST00000306641 USP17L23D6RBM5 183 aa7.26□□□□□ -1.25
CSPG4P1Y-201ENST00000306641 RNASE13Q5GAN3 156 aaKnown RBP7.26□□□□□ -1.25
CSPG4P1Y-201ENST00000306641 C2orf66Q6UXQ4 117 aa7.26□□□□□ -1.25
CSPG4P1Y-201ENST00000306641 FA2HQ7L5A8 372 aa7.26□□□□□ -1.25
CSPG4P1Y-201ENST00000306641 CHCHD10Q8WYQ3 142 aaPredicted RBP7.26□□□□□ -1.25
CSPG4P1Y-201ENST00000306641 FAT2Q9NYQ8 4349 aa7.25□□□□□ -1.25
CSPG4P1Y-201ENST00000306641 CCL25O15444 150 aa7.25□□□□□ -1.25
CSPG4P1Y-201ENST00000306641 FUSP35637 526 aaKnown RBP eCLIP7.25□□□□□ -1.25
CSPG4P1Y-201ENST00000306641 XCL1P47992 114 aa7.25□□□□□ -1.25
CSPG4P1Y-201ENST00000306641 DNAH17Q9UFH2 4485 aa7.25□□□□□ -1.25
CSPG4P1Y-201ENST00000306641 HECTD4Q9Y4D8 3996 aa7.24□□□□□ -1.25
CSPG4P1Y-201ENST00000306641 TRAV13-1A0A0B4J241 112 aa7.24□□□□□ -1.25
CSPG4P1Y-201ENST00000306641 C1orf196B1AJZ1 125 aa7.24□□□□□ -1.25
CSPG4P1Y-201ENST00000306641 GCSHP23434 173 aa7.24□□□□□ -1.25
CSPG4P1Y-201ENST00000306641 MRPS36P82909 103 aaKnown RBP7.24□□□□□ -1.25
CSPG4P1Y-201ENST00000306641 CFAP161Q6P656 301 aa7.24□□□□□ -1.25
CSPG4P1Y-201ENST00000306641 KRTAP26-1Q6PEX3 210 aa7.24□□□□□ -1.25
CSPG4P1Y-201ENST00000306641 Q6ZN92 141 aa7.24□□□□□ -1.25
CSPG4P1Y-201ENST00000306641 PYGO1Q9Y3Y4 419 aa7.24□□□□□ -1.25
CSPG4P1Y-201ENST00000306641 hDV102S1A0JD36 115 aa7.23□□□□□ -1.25
CSPG4P1Y-201ENST00000306641 LINC01549A6NIU2 74 aa7.23□□□□□ -1.25
CSPG4P1Y-201ENST00000306641 IFITM10A6NMD0 228 aa7.23□□□□□ -1.25
CSPG4P1Y-201ENST00000306641 TEX43Q6ZNM6 134 aa7.23□□□□□ -1.25
CSPG4P1Y-201ENST00000306641 TMEM141Q96I45 108 aa7.23□□□□□ -1.25
CSPG4P1Y-201ENST00000306641 YPEL4Q96NS1 127 aa7.23□□□□□ -1.25
CSPG4P1Y-201ENST00000306641 C2orf88Q9BSF0 95 aa7.23□□□□□ -1.25
CSPG4P1Y-201ENST00000306641 AP5S1Q9NUS5 200 aa7.23□□□□□ -1.25
CSPG4P1Y-201ENST00000306641 EPPK1P58107 5090 aaKnown RBP7.23□□□□□ -1.25
CSPG4P1Y-201ENST00000306641 IGLV4-3A0A075B6K6 122 aa7.22□□□□□ -1.25
CSPG4P1Y-201ENST00000306641 RAB5BP61020 215 aa7.22□□□□□ -1.25
CSPG4P1Y-201ENST00000306641 FOXI1Q12951 378 aa7.22□□□□□ -1.25
CSPG4P1Y-201ENST00000306641 PAPPA-AS1Q5QFB9 102 aa7.22□□□□□ -1.25
CSPG4P1Y-201ENST00000306641 CD164L2Q6UWJ8 174 aa7.22□□□□□ -1.25
CSPG4P1Y-201ENST00000306641 NPSP0C0P6 89 aa7.21□□□□□ -1.26
CSPG4P1Y-201ENST00000306641 MALP21145 153 aa7.21□□□□□ -1.26
CSPG4P1Y-201ENST00000306641 C18orf32Q8TCD1 76 aa7.21□□□□□ -1.26
CSPG4P1Y-201ENST00000306641 TOMM6Q96B49 74 aa7.21□□□□□ -1.26
CSPG4P1Y-201ENST00000306641 OPRPNQ99935 248 aaPredicted RBP7.21□□□□□ -1.26
CSPG4P1Y-201ENST00000306641 IGHV1-58A0A0C4DH39 117 aa7.2□□□□□ -1.26
CSPG4P1Y-201ENST00000306641 LINC01546A6NGU7 62 aa7.2□□□□□ -1.26
CSPG4P1Y-201ENST00000306641 PRSS1P07477 247 aa7.2□□□□□ -1.26
CSPG4P1Y-201ENST00000306641 SCGB3A1Q96QR1 104 aa7.2□□□□□ -1.26
CSPG4P1Y-201ENST00000306641 TIMM17AQ99595 171 aa7.2□□□□□ -1.26
CSPG4P1Y-201ENST00000306641 VCX2Q9H322 139 aa7.2□□□□□ -1.26
CSPG4P1Y-201ENST00000306641 PKD1P98161 4303 aa7.19□□□□□ -1.26
CSPG4P1Y-201ENST00000306641 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.19□□□□□ -1.26
CSPG4P1Y-201ENST00000306641 COX7A2LO14548 114 aa7.19□□□□□ -1.26
CSPG4P1Y-201ENST00000306641 APOMO95445 188 aa7.19□□□□□ -1.26
CSPG4P1Y-201ENST00000306641 LINC00614P0C842 121 aa7.19□□□□□ -1.26
CSPG4P1Y-201ENST00000306641 HIGD2BQ4VC39 106 aa7.19□□□□□ -1.26
CSPG4P1Y-201ENST00000306641 C15orf56Q8N910 161 aa7.19□□□□□ -1.26
CSPG4P1Y-201ENST00000306641 IGIPA6NJ69 53 aa7.18□□□□□ -1.26
CSPG4P1Y-201ENST00000306641 CDK2AP2O75956 126 aa7.18□□□□□ -1.26
CSPG4P1Y-201ENST00000306641 KRTAP10-1P60331 282 aa7.18□□□□□ -1.26
CSPG4P1Y-201ENST00000306641 ERASQ7Z444 233 aa7.18□□□□□ -1.26
CSPG4P1Y-201ENST00000306641 GVQW2A0A096LPI5 108 aaPredicted RBP7.17□□□□□ -1.26
CSPG4P1Y-201ENST00000306641 ZNF561-AS1K7EIQ3 104 aa7.17□□□□□ -1.26
CSPG4P1Y-201ENST00000306641 HBDP02042 147 aa7.17□□□□□ -1.26
CSPG4P1Y-201ENST00000306641 TRGC2P03986 189 aa7.17□□□□□ -1.26
CSPG4P1Y-201ENST00000306641 C5orf38Q86SI9 138 aa7.17□□□□□ -1.26
CSPG4P1Y-201ENST00000306641 FAM104AQ969W3 186 aa7.17□□□□□ -1.26
CSPG4P1Y-201ENST00000306641 AMELXQ99217 191 aa7.17□□□□□ -1.26
CSPG4P1Y-201ENST00000306641 PKHD1P08F94 4074 aa7.16□□□□□ -1.26
CSPG4P1Y-201ENST00000306641 SCO1O75880 301 aa7.16□□□□□ -1.26
CSPG4P1Y-201ENST00000306641 UBE2D1P51668 147 aa7.16□□□□□ -1.26
CSPG4P1Y-201ENST00000306641 CNBPP62633 177 aaKnown RBP7.16□□□□□ -1.26
CSPG4P1Y-201ENST00000306641 SEC11AP67812 179 aa7.16□□□□□ -1.26
CSPG4P1Y-201ENST00000306641 BAGE3Q86Y29 109 aa7.16□□□□□ -1.26
CSPG4P1Y-201ENST00000306641 COLCA2A8K830 154 aa7.15□□□□□ -1.26
CSPG4P1Y-201ENST00000306641 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.15□□□□□ -1.26
CSPG4P1Y-201ENST00000306641 ATP6V1G1O75348 118 aa7.15□□□□□ -1.26
CSPG4P1Y-201ENST00000306641 LINC01620Q4KN68 170 aa7.15□□□□□ -1.26
CSPG4P1Y-201ENST00000306641 LINC00173Q6ZV60 143 aa7.15□□□□□ -1.26
CSPG4P1Y-201ENST00000306641 C9orf163Q8N9P6 203 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms