RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 PRR9Q5T870 116 aa10.34□□□□□ -0.75
PRKCB-201ENST00000303531 RNASE3P12724 160 aaKnown RBP10.34□□□□□ -0.75
PRKCB-201ENST00000303531 Q8N6K4 173 aa10.34□□□□□ -0.75
PRKCB-201ENST00000303531 NDUFC2O95298 119 aa10.34□□□□□ -0.75
PRKCB-201ENST00000303531 LINC00482Q8N8I6 264 aa10.34□□□□□ -0.75
PRKCB-201ENST00000303531 Q8N976 141 aa10.34□□□□□ -0.75
PRKCB-201ENST00000303531 A8MZ25 164 aa10.34□□□□□ -0.75
PRKCB-201ENST00000303531 C11orf21Q9P2W6 132 aa10.34□□□□□ -0.75
PRKCB-201ENST00000303531 TRBV30A0A0K0K1B3 111 aa10.33□□□□□ -0.76
PRKCB-201ENST00000303531 CRYGDP07320 174 aa10.33□□□□□ -0.76
PRKCB-201ENST00000303531 COL4A4P53420 1690 aaPredicted RBP10.33□□□□□ -0.76
PRKCB-201ENST00000303531 TRBV6-4A0A1B0GX49 114 aa10.33□□□□□ -0.76
PRKCB-201ENST00000303531 EML5Q05BV3 1969 aa10.33□□□□□ -0.76
PRKCB-201ENST00000303531 DOPEY1Q5JWR5 2465 aa10.33□□□□□ -0.76
PRKCB-201ENST00000303531 TRBV6-5A0A0K0K1A5 114 aa10.33□□□□□ -0.76
PRKCB-201ENST00000303531 HIVEP3Q5T1R4 2406 aa10.33□□□□□ -0.76
PRKCB-201ENST00000303531 TSHBP01222 138 aa10.32□□□□□ -0.76
PRKCB-201ENST00000303531 PYGO1Q9Y3Y4 419 aa10.32□□□□□ -0.76
PRKCB-201ENST00000303531 XAGE1AQ9HD64 81 aa10.32□□□□□ -0.76
PRKCB-201ENST00000303531 MYO9AB2RTY4 2548 aa10.32□□□□□ -0.76
PRKCB-201ENST00000303531 DEFB131BA0A096LNP1 70 aa10.32□□□□□ -0.76
PRKCB-201ENST00000303531 C14orf177Q52M58 125 aa10.32□□□□□ -0.76
PRKCB-201ENST00000303531 C2orf91Q6ZV80 131 aa10.32□□□□□ -0.76
PRKCB-201ENST00000303531 MUC22E2RYF6 1773 aaPredicted RBP10.31□□□□□ -0.76
PRKCB-201ENST00000303531 CCDC168Q8NDH2 2452 aa10.31□□□□□ -0.76
PRKCB-201ENST00000303531 INAFM1C9JVW0 142 aa10.31□□□□□ -0.76
PRKCB-201ENST00000303531 SCXQ7RTU7 201 aa10.31□□□□□ -0.76
PRKCB-201ENST00000303531 ZNF702PQ9H963 129 aa10.3□□□□□ -0.76
PRKCB-201ENST00000303531 C20orf197Q8N268 126 aa10.3□□□□□ -0.76
PRKCB-201ENST00000303531 GAS8-AS1O95177 125 aa10.3□□□□□ -0.76
PRKCB-201ENST00000303531 ENHOQ6UWT2 76 aa10.3□□□□□ -0.76
PRKCB-201ENST00000303531 PSMG3-AS1Q96PY0 264 aa10.3□□□□□ -0.76
PRKCB-201ENST00000303531 A0A096LNI7 61 aa10.29□□□□□ -0.76
PRKCB-201ENST00000303531 PRO3102Q9H379 93 aa10.29□□□□□ -0.76
PRKCB-201ENST00000303531 FAM19A1Q7Z5A9 133 aa10.29□□□□□ -0.76
PRKCB-201ENST00000303531 BBC3Q96PG8 261 aaPredicted RBP10.29□□□□□ -0.76
PRKCB-201ENST00000303531 KLLNB2CW77 178 aa10.29□□□□□ -0.76
PRKCB-201ENST00000303531 MIFP14174 115 aa10.28□□□□□ -0.76
PRKCB-201ENST00000303531 C6orf99Q4VX62 202 aa10.28□□□□□ -0.76
PRKCB-201ENST00000303531 DCANP1Q8TF63 244 aa10.28□□□□□ -0.76
PRKCB-201ENST00000303531 UQCRQO14949 82 aa10.28□□□□□ -0.76
PRKCB-201ENST00000303531 Q6ZS46 218 aa10.28□□□□□ -0.76
PRKCB-201ENST00000303531 C18orf65Q6ZTR6 163 aa10.28□□□□□ -0.76
PRKCB-201ENST00000303531 MRPS12O15235 138 aaKnown RBP10.28□□□□□ -0.76
PRKCB-201ENST00000303531 WDR87Q6ZQQ6 2873 aa10.27□□□□□ -0.76
PRKCB-201ENST00000303531 PRM2P04554 102 aa10.27□□□□□ -0.77
PRKCB-201ENST00000303531 IGKV4-1P06312 121 aa10.27□□□□□ -0.77
PRKCB-201ENST00000303531 RBX1P62877 108 aa10.27□□□□□ -0.77
PRKCB-201ENST00000303531 UBE2D4Q9Y2X8 147 aa10.27□□□□□ -0.77
PRKCB-201ENST00000303531 HILS1P60008 231 aa10.27□□□□□ -0.77
PRKCB-201ENST00000303531 TIMM17BO60830 172 aa10.26□□□□□ -0.77
PRKCB-201ENST00000303531 ATP5EP2Q5VTU8 51 aa10.26□□□□□ -0.77
PRKCB-201ENST00000303531 POLR2KP53803 58 aaKnown RBP10.26□□□□□ -0.77
PRKCB-201ENST00000303531 FAM19A5Q7Z5A7 132 aaPredicted RBP10.26□□□□□ -0.77
PRKCB-201ENST00000303531 C9orf85Q96MD7 179 aa10.26□□□□□ -0.77
PRKCB-201ENST00000303531 LOC100131303A0A0U1RQF7 123 aa10.26□□□□□ -0.77
PRKCB-201ENST00000303531 WFDC10AQ9H1F0 79 aa10.26□□□□□ -0.77
PRKCB-201ENST00000303531 ABCA2Q9BZC7 2435 aa10.25□□□□□ -0.77
PRKCB-201ENST00000303531 ATG2AQ2TAZ0 1938 aa10.25□□□□□ -0.77
PRKCB-201ENST00000303531 IGLV1-40P01703 118 aa10.25□□□□□ -0.77
PRKCB-201ENST00000303531 A0A087WZ39 114 aa10.25□□□□□ -0.77
PRKCB-201ENST00000303531 BRK1Q8WUW1 75 aa10.24□□□□□ -0.77
PRKCB-201ENST00000303531 IL17DQ8TAD2 202 aa10.24□□□□□ -0.77
PRKCB-201ENST00000303531 SRCAPQ6ZRS2 3230 aa10.24□□□□□ -0.77
PRKCB-201ENST00000303531 SYCNQ0VAF6 134 aa10.24□□□□□ -0.77
PRKCB-201ENST00000303531 LINC00526Q96FQ7 95 aa10.24□□□□□ -0.77
PRKCB-201ENST00000303531 CD164L2Q6UWJ8 174 aa10.23□□□□□ -0.77
PRKCB-201ENST00000303531 C3orf22Q8N5N4 141 aa10.23□□□□□ -0.77
PRKCB-201ENST00000303531 LINC01006Q8NI28 216 aa10.23□□□□□ -0.77
PRKCB-201ENST00000303531 CCKP06307 115 aa10.22□□□□□ -0.77
PRKCB-201ENST00000303531 PIEZO2Q9H5I5 2752 aa10.22□□□□□ -0.77
PRKCB-201ENST00000303531 UBE2D1P51668 147 aa10.22□□□□□ -0.77
PRKCB-201ENST00000303531 ZNF843Q8N446 348 aa10.22□□□□□ -0.77
PRKCB-201ENST00000303531 CNFNQ9BYD5 112 aa10.22□□□□□ -0.77
PRKCB-201ENST00000303531 C1orf158Q8N1D5 194 aa10.22□□□□□ -0.77
PRKCB-201ENST00000303531 FAM236DA0A1B0GTK5 79 aa10.22□□□□□ -0.77
PRKCB-201ENST00000303531 FAM236CP0DP71 79 aa10.22□□□□□ -0.77
PRKCB-201ENST00000303531 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.22□□□□□ -0.77
PRKCB-201ENST00000303531 LST1O00453 97 aa10.22□□□□□ -0.77
PRKCB-201ENST00000303531 MRPS36P82909 103 aaKnown RBP10.22□□□□□ -0.77
PRKCB-201ENST00000303531 LINC00959A0A1B0GUT2 108 aa10.21□□□□□ -0.77
PRKCB-201ENST00000303531 NAV2Q8IVL1 2488 aa10.21□□□□□ -0.77
PRKCB-201ENST00000303531 IGKV2-28A0A075B6P5 120 aa10.21□□□□□ -0.77
PRKCB-201ENST00000303531 IGKV2D-28P01615 120 aa10.21□□□□□ -0.77
PRKCB-201ENST00000303531 LINC00310P59036 64 aa10.21□□□□□ -0.77
PRKCB-201ENST00000303531 CDSNQ15517 529 aa10.21□□□□□ -0.78
PRKCB-201ENST00000303531 C3orf84H3BNL1 204 aa10.2□□□□□ -0.78
PRKCB-201ENST00000303531 MPLKIPQ8TAP9 179 aa10.2□□□□□ -0.78
PRKCB-201ENST00000303531 Q6ZQY7 126 aa10.2□□□□□ -0.78
PRKCB-201ENST00000303531 PIEZO1Q92508 2521 aa10.2□□□□□ -0.78
PRKCB-201ENST00000303531 SMIM11BQ8TCY0 68 aa10.2□□□□□ -0.78
PRKCB-201ENST00000303531 PRRC2AP48634 2157 aaKnown RBP10.19□□□□□ -0.78
PRKCB-201ENST00000303531 C10orf142B7Z368 130 aa10.19□□□□□ -0.78
PRKCB-201ENST00000303531 WFDC10BQ8IUB3 73 aa10.19□□□□□ -0.78
PRKCB-201ENST00000303531 LRCOL1A6NCL2 159 aa10.19□□□□□ -0.78
PRKCB-201ENST00000303531 LY6G6DO95868 133 aa10.19□□□□□ -0.78
PRKCB-201ENST00000303531 SEC61GP60059 68 aa10.18□□□□□ -0.78
PRKCB-201ENST00000303531 POM121L12Q8N7R1 296 aa10.18□□□□□ -0.78
PRKCB-201ENST00000303531 URB1-AS1Q96HZ7 61 aa10.18□□□□□ -0.78
PRKCB-201ENST00000303531 EDN2P20800 178 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms